EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000007809 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 4123 bases
Position: chrGeneScaffold_492:4703-8825
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008348	zf-C2H2	PF00096.26	1.4e-23	1	4
ENSGMOP00000008348	zf-C2H2	PF00096.26	1.4e-23	2	4
ENSGMOP00000008348	zf-C2H2	PF00096.26	1.4e-23	3	4
ENSGMOP00000008348	zf-C2H2	PF00096.26	1.4e-23	4	4
ENSGMOP00000008348	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008584	-	843	-	ENSGMOP00000008348	281 (aa)	-	UPI00023F135A

Gene Model

Click here to download ENSGMOG00000007809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007809's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000007809	-	98	45.631	ENSGMOG00000005588	-	100	45.631
ENSGMOG00000007809	-	100	32.042	ENSGMOG00000004242	znf319b	81	32.862
ENSGMOG00000007809	-	98	36.842	ENSGMOG00000016007	-	75	36.842
ENSGMOG00000007809	-	99	43.396	ENSGMOG00000003238	-	99	43.396
ENSGMOG00000007809	-	98	39.048	ENSGMOG00000012038	prdm5	100	39.048
ENSGMOG00000007809	-	98	35.514	ENSGMOG00000002669	snai2	54	35.514
ENSGMOG00000007809	-	100	32.624	ENSGMOG00000007875	ZNF319	97	32.624
ENSGMOG00000007809	-	99	41.538	ENSGMOG00000006668	znf236	66	41.538
ENSGMOG00000007809	-	95	39.773	ENSGMOG00000012990	-	100	34.483
ENSGMOG00000007809	-	99	31.690	ENSGMOG00000011017	GZF1	52	31.690
ENSGMOG00000007809	-	99	31.373	ENSGMOG00000009187	ZNF626	74	35.317
ENSGMOG00000007809	-	98	36.154	ENSGMOG00000016613	-	97	35.057
ENSGMOG00000007809	-	99	35.802	ENSGMOG00000004063	ZNF628	99	35.802
ENSGMOG00000007809	-	85	43.750	ENSGMOG00000020024	-	100	43.750
ENSGMOG00000007809	-	100	30.357	ENSGMOG00000016554	znf646	85	30.357
ENSGMOG00000007809	-	98	35.714	ENSGMOG00000019123	gfi1b	62	35.714
ENSGMOG00000007809	-	100	32.479	ENSGMOG00000018506	-	100	41.509
ENSGMOG00000007809	-	89	35.294	ENSGMOG00000000629	scrt1b	50	35.294
ENSGMOG00000007809	-	98	35.000	ENSGMOG00000007538	znf366	69	35.000
ENSGMOG00000007809	-	95	37.264	ENSGMOG00000020149	si:dkeyp-113d7.1	100	37.264
ENSGMOG00000007809	-	98	33.721	ENSGMOG00000000494	-	98	34.471
ENSGMOG00000007809	-	98	39.759	ENSGMOG00000017555	znf710b	78	39.759
ENSGMOG00000007809	-	99	48.214	ENSGMOG00000017526	-	93	48.214
ENSGMOG00000007809	-	99	44.086	ENSGMOG00000017518	-	63	44.086
ENSGMOG00000007809	-	99	38.318	ENSGMOG00000003709	nktr	54	38.318
ENSGMOG00000007809	-	99	37.815	ENSGMOG00000000127	-	58	37.815
ENSGMOG00000007809	-	99	35.547	ENSGMOG00000004315	-	94	33.688
ENSGMOG00000007809	-	98	37.143	ENSGMOG00000011409	e4f1	58	37.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007809	-	100	57.801	ENSCHOG00000009909	ZNF408	53	57.801	Choloepus_hoffmanni
ENSGMOG00000007809	-	100	58.511	ENSPEMG00000016757	Zfp408	54	58.511	Peromyscus_maniculatus_bairdii
ENSGMOG00000007809	-	100	62.718	ENSPFOG00000001760	-	69	62.718	Poecilia_formosa
ENSGMOG00000007809	-	100	63.701	ENSPMEG00000021147	-	63	63.701	Poecilia_mexicana
ENSGMOG00000007809	-	98	53.381	ENSXETG00000001980	znf408	74	53.381	Xenopus_tropicalis
ENSGMOG00000007809	-	100	63.345	ENSXCOG00000002869	-	56	63.345	Xiphophorus_couchianus
ENSGMOG00000007809	-	100	62.898	ENSXMAG00000018347	-	57	62.898	Xiphophorus_maculatus