EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000007961 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 25462 bases
Position: chrGeneScaffold_260:666893-692354
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008518	R3H	PF01424.22	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008758	-	2976	-	ENSGMOP00000008518	991 (aa)	-	UPI00023F15AB

Gene Model

Click here to download ENSGMOG00000007961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000007961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000007961	r3hdm2	54	69.141	ENSGMOG00000006042	-	51	69.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000007961	r3hdm2	100	61.341	ENSG00000179912	R3HDM2	100	58.453	Homo_sapiens
ENSGMOG00000007961	r3hdm2	100	83.836	ENSAPOG00000020341	r3hdm2	95	83.252	Acanthochromis_polyacanthus
ENSGMOG00000007961	r3hdm2	95	70.120	ENSAMEG00000004812	R3HDM2	95	65.978	Ailuropoda_melanoleuca
ENSGMOG00000007961	r3hdm2	99	76.758	ENSACIG00000016146	r3hdm2	98	76.758	Amphilophus_citrinellus
ENSGMOG00000007961	r3hdm2	100	83.836	ENSAOCG00000023694	r3hdm2	95	83.447	Amphiprion_ocellaris
ENSGMOG00000007961	r3hdm2	100	82.537	ENSAPEG00000008851	r3hdm2	99	82.129	Amphiprion_percula
ENSGMOG00000007961	r3hdm2	99	80.363	ENSATEG00000025024	r3hdm2	100	80.564	Anabas_testudineus
ENSGMOG00000007961	r3hdm2	100	55.023	ENSAPLG00000004298	R3HDM2	86	81.844	Anas_platyrhynchos
ENSGMOG00000007961	r3hdm2	100	59.499	ENSACAG00000006388	R3HDM2	95	59.634	Anolis_carolinensis
ENSGMOG00000007961	r3hdm2	100	61.243	ENSANAG00000025397	-	95	62.905	Aotus_nancymaae
ENSGMOG00000007961	r3hdm2	95	62.876	ENSANAG00000031310	-	96	59.154	Aotus_nancymaae
ENSGMOG00000007961	r3hdm2	100	82.863	ENSACLG00000019106	r3hdm2	95	82.927	Astatotilapia_calliptera
ENSGMOG00000007961	r3hdm2	94	69.467	ENSAMXG00000017180	r3hdm2	99	64.966	Astyanax_mexicanus
ENSGMOG00000007961	r3hdm2	95	65.665	ENSBTAG00000018361	R3HDM2	95	62.648	Bos_taurus
ENSGMOG00000007961	r3hdm2	100	61.341	ENSCJAG00000007365	R3HDM2	95	62.905	Callithrix_jacchus
ENSGMOG00000007961	r3hdm2	98	64.588	ENSCAFG00000000215	R3HDM2	95	63.054	Canis_familiaris
ENSGMOG00000007961	r3hdm2	100	64.398	ENSCAFG00020023713	R3HDM2	95	65.483	Canis_lupus_dingo
ENSGMOG00000007961	r3hdm2	100	63.834	ENSCHIG00000014022	R3HDM2	95	65.548	Capra_hircus
ENSGMOG00000007961	r3hdm2	100	61.561	ENSTSYG00000001449	R3HDM2	95	62.389	Carlito_syrichta
ENSGMOG00000007961	r3hdm2	100	65.616	ENSCPOG00000009217	R3HDM2	95	66.108	Cavia_porcellus
ENSGMOG00000007961	r3hdm2	89	61.615	ENSCCAG00000026083	R3HDM2	94	62.417	Cebus_capucinus
ENSGMOG00000007961	r3hdm2	95	68.787	ENSCATG00000036929	R3HDM2	95	65.192	Cercocebus_atys
ENSGMOG00000007961	r3hdm2	100	64.868	ENSCLAG00000011997	R3HDM2	95	65.782	Chinchilla_lanigera
ENSGMOG00000007961	r3hdm2	100	63.627	ENSCSAG00000004911	R3HDM2	95	64.510	Chlorocebus_sabaeus
ENSGMOG00000007961	r3hdm2	74	69.799	ENSCHOG00000005636	R3HDM2	85	71.652	Choloepus_hoffmanni
ENSGMOG00000007961	r3hdm2	100	62.476	ENSCPBG00000013922	R3HDM2	95	63.593	Chrysemys_picta_bellii
ENSGMOG00000007961	r3hdm2	95	68.986	ENSCANG00000043807	R3HDM2	95	65.290	Colobus_angolensis_palliatus
ENSGMOG00000007961	r3hdm2	95	67.984	ENSCGRG00001017324	R3hdm2	95	64.208	Cricetulus_griseus_chok1gshd
ENSGMOG00000007961	r3hdm2	95	67.984	ENSCGRG00000003862	R3hdm2	95	64.208	Cricetulus_griseus_crigri
ENSGMOG00000007961	r3hdm2	100	81.889	ENSCSEG00000010925	r3hdm2	95	81.402	Cynoglossus_semilaevis
ENSGMOG00000007961	r3hdm2	100	80.469	ENSCVAG00000009058	r3hdm2	95	80.273	Cyprinodon_variegatus
ENSGMOG00000007961	r3hdm2	99	70.430	ENSDARG00000102610	r3hdm2	99	71.841	Danio_rerio
ENSGMOG00000007961	r3hdm2	100	63.271	ENSDNOG00000015033	R3HDM2	100	64.255	Dasypus_novemcinctus
ENSGMOG00000007961	r3hdm2	99	59.446	ENSDORG00000011462	R3hdm2	99	60.375	Dipodomys_ordii
ENSGMOG00000007961	r3hdm2	95	70.577	ENSEASG00005007091	R3HDM2	95	66.043	Equus_asinus_asinus
ENSGMOG00000007961	r3hdm2	100	64.596	ENSECAG00000003157	R3HDM2	95	66.108	Equus_caballus
ENSGMOG00000007961	r3hdm2	100	77.011	ENSELUG00000015969	r3hdm2	94	77.395	Esox_lucius
ENSGMOG00000007961	r3hdm2	63	35.921	ENSELUG00000002532	-	78	40.449	Esox_lucius
ENSGMOG00000007961	r3hdm2	95	69.860	ENSFCAG00000000192	R3HDM2	94	65.824	Felis_catus
ENSGMOG00000007961	r3hdm2	87	59.703	ENSFALG00000000255	R3HDM2	94	59.932	Ficedula_albicollis
ENSGMOG00000007961	r3hdm2	100	64.475	ENSFDAG00000019385	R3HDM2	95	65.849	Fukomys_damarensis
ENSGMOG00000007961	r3hdm2	100	81.543	ENSFHEG00000016484	r3hdm2	95	81.543	Fundulus_heteroclitus
ENSGMOG00000007961	r3hdm2	100	62.361	ENSGALG00000043736	R3HDM2	95	62.476	Gallus_gallus
ENSGMOG00000007961	r3hdm2	100	82.877	ENSGAFG00000013887	r3hdm2	95	82.290	Gambusia_affinis
ENSGMOG00000007961	r3hdm2	100	84.409	ENSGACG00000006442	r3hdm2	100	83.813	Gasterosteus_aculeatus
ENSGMOG00000007961	r3hdm2	100	61.900	ENSGAGG00000017797	R3HDM2	94	63.016	Gopherus_agassizii
ENSGMOG00000007961	r3hdm2	100	63.636	ENSGGOG00000015007	R3HDM2	95	65.192	Gorilla_gorilla
ENSGMOG00000007961	r3hdm2	95	70.577	ENSHGLG00000010434	-	95	65.945	Heterocephalus_glaber_female
ENSGMOG00000007961	r3hdm2	94	56.217	ENSHGLG00000010421	-	95	56.674	Heterocephalus_glaber_female
ENSGMOG00000007961	r3hdm2	97	55.186	ENSHGLG00100018871	-	96	55.769	Heterocephalus_glaber_male
ENSGMOG00000007961	r3hdm2	95	70.577	ENSHGLG00100004183	-	95	65.846	Heterocephalus_glaber_male
ENSGMOG00000007961	r3hdm2	100	80.160	ENSHCOG00000001142	r3hdm2	92	80.739	Hippocampus_comes
ENSGMOG00000007961	r3hdm2	100	72.201	ENSIPUG00000023873	r3hdm2	95	72.008	Ictalurus_punctatus
ENSGMOG00000007961	r3hdm2	100	58.071	ENSSTOG00000013424	R3HDM2	94	59.154	Ictidomys_tridecemlineatus
ENSGMOG00000007961	r3hdm2	100	64.631	ENSJJAG00000010001	R3hdm2	95	65.222	Jaculus_jaculus
ENSGMOG00000007961	r3hdm2	100	83.122	ENSKMAG00000012695	r3hdm2	99	79.221	Kryptolebias_marmoratus
ENSGMOG00000007961	r3hdm2	100	82.765	ENSLBEG00000013115	r3hdm2	92	82.341	Labrus_bergylta
ENSGMOG00000007961	r3hdm2	95	70.717	ENSLACG00000019064	r3hdm2	97	70.259	Latimeria_chalumnae
ENSGMOG00000007961	r3hdm2	100	71.372	ENSLOCG00000005976	r3hdm2	95	69.736	Lepisosteus_oculatus
ENSGMOG00000007961	r3hdm2	100	64.608	ENSLAFG00000006510	R3HDM2	95	66.370	Loxodonta_africana
ENSGMOG00000007961	r3hdm2	95	69.048	ENSMFAG00000036385	R3HDM2	95	65.290	Macaca_fascicularis
ENSGMOG00000007961	r3hdm2	100	64.729	ENSMMUG00000021789	R3HDM2	95	65.947	Macaca_mulatta
ENSGMOG00000007961	r3hdm2	95	68.911	ENSMNEG00000025314	R3HDM2	95	65.324	Macaca_nemestrina
ENSGMOG00000007961	r3hdm2	95	68.787	ENSMLEG00000028915	R3HDM2	95	65.290	Mandrillus_leucophaeus
ENSGMOG00000007961	r3hdm2	100	82.913	ENSMAMG00000009793	r3hdm2	95	82.685	Mastacembelus_armatus
ENSGMOG00000007961	r3hdm2	100	82.863	ENSMZEG00005007319	r3hdm2	95	82.927	Maylandia_zebra
ENSGMOG00000007961	r3hdm2	100	61.727	ENSMICG00000012389	R3HDM2	95	62.610	Microcebus_murinus
ENSGMOG00000007961	r3hdm2	100	64.236	ENSMOCG00000014425	R3hdm2	95	65.025	Microtus_ochrogaster
ENSGMOG00000007961	r3hdm2	100	76.832	ENSMMOG00000007448	r3hdm2	99	76.832	Mola_mola
ENSGMOG00000007961	r3hdm2	90	82.659	ENSMALG00000010211	r3hdm2	98	82.659	Monopterus_albus
ENSGMOG00000007961	r3hdm2	100	64.503	MGP_CAROLIEiJ_G0015896	R3hdm2	95	64.700	Mus_caroli
ENSGMOG00000007961	r3hdm2	100	64.764	ENSMUSG00000025404	R3hdm2	95	65.256	Mus_musculus
ENSGMOG00000007961	r3hdm2	100	64.300	MGP_PahariEiJ_G0031189	R3hdm2	95	65.222	Mus_pahari
ENSGMOG00000007961	r3hdm2	100	64.637	MGP_SPRETEiJ_G0016722	R3hdm2	95	64.833	Mus_spretus
ENSGMOG00000007961	r3hdm2	93	70.319	ENSMPUG00000001818	R3HDM2	91	65.827	Mustela_putorius_furo
ENSGMOG00000007961	r3hdm2	100	64.868	ENSMLUG00000004980	R3HDM2	95	65.358	Myotis_lucifugus
ENSGMOG00000007961	r3hdm2	100	65.187	ENSNGAG00000018800	R3hdm2	95	66.108	Nannospalax_galili
ENSGMOG00000007961	r3hdm2	99	75.025	ENSNBRG00000004483	r3hdm2	100	75.428	Neolamprologus_brichardi
ENSGMOG00000007961	r3hdm2	95	68.986	ENSNLEG00000017351	R3HDM2	95	65.388	Nomascus_leucogenys
ENSGMOG00000007961	r3hdm2	100	55.752	ENSMEUG00000008588	R3HDM2	95	56.582	Notamacropus_eugenii
ENSGMOG00000007961	r3hdm2	100	56.552	ENSOPRG00000013670	R3HDM2	94	57.241	Ochotona_princeps
ENSGMOG00000007961	r3hdm2	100	78.486	ENSONIG00000005075	r3hdm2	95	78.486	Oreochromis_niloticus
ENSGMOG00000007961	r3hdm2	95	70.217	ENSOCUG00000013258	R3HDM2	95	65.196	Oryctolagus_cuniculus
ENSGMOG00000007961	r3hdm2	100	83.024	ENSORLG00000005502	r3hdm2	95	82.307	Oryzias_latipes
ENSGMOG00000007961	r3hdm2	100	82.829	ENSORLG00020017069	r3hdm2	95	82.111	Oryzias_latipes_hni
ENSGMOG00000007961	r3hdm2	100	82.927	ENSORLG00015012735	r3hdm2	95	82.209	Oryzias_latipes_hsok
ENSGMOG00000007961	r3hdm2	99	73.300	ENSOMEG00000018079	r3hdm2	93	74.096	Oryzias_melastigma
ENSGMOG00000007961	r3hdm2	100	61.713	ENSOGAG00000012055	R3HDM2	95	62.894	Otolemur_garnettii
ENSGMOG00000007961	r3hdm2	96	55.087	ENSOGAG00000027966	-	94	54.713	Otolemur_garnettii
ENSGMOG00000007961	r3hdm2	95	65.672	ENSOARG00000006929	R3HDM2	95	62.562	Ovis_aries
ENSGMOG00000007961	r3hdm2	100	63.735	ENSPPAG00000034395	R3HDM2	95	65.388	Pan_paniscus
ENSGMOG00000007961	r3hdm2	95	65.451	ENSPPRG00000009240	R3HDM2	95	62.710	Panthera_pardus
ENSGMOG00000007961	r3hdm2	95	65.451	ENSPTIG00000008752	R3HDM2	95	62.710	Panthera_tigris_altaica
ENSGMOG00000007961	r3hdm2	100	64.166	ENSPTRG00000046457	R3HDM2	95	65.388	Pan_troglodytes
ENSGMOG00000007961	r3hdm2	99	61.614	ENSPANG00000024002	R3HDM2	97	62.734	Papio_anubis
ENSGMOG00000007961	r3hdm2	100	75.872	ENSPKIG00000003171	r3hdm2	95	75.673	Paramormyrops_kingsleyae
ENSGMOG00000007961	r3hdm2	65	52.519	ENSPSIG00000006954	R3HDM2	71	82.353	Pelodiscus_sinensis
ENSGMOG00000007961	r3hdm2	99	77.351	ENSPMGG00000007061	r3hdm2	99	77.452	Periophthalmus_magnuspinnatus
ENSGMOG00000007961	r3hdm2	100	64.067	ENSPEMG00000015964	R3hdm2	95	64.497	Peromyscus_maniculatus_bairdii
ENSGMOG00000007961	r3hdm2	100	61.431	ENSPCIG00000023841	R3HDM2	100	59.548	Phascolarctos_cinereus
ENSGMOG00000007961	r3hdm2	99	70.860	ENSPFOG00000006077	r3hdm2	98	60.589	Poecilia_formosa
ENSGMOG00000007961	r3hdm2	100	80.724	ENSPLAG00000002971	r3hdm2	95	80.626	Poecilia_latipinna
ENSGMOG00000007961	r3hdm2	100	80.724	ENSPMEG00000005330	r3hdm2	95	80.626	Poecilia_mexicana
ENSGMOG00000007961	r3hdm2	100	81.738	ENSPREG00000008424	r3hdm2	95	81.641	Poecilia_reticulata
ENSGMOG00000007961	r3hdm2	98	57.773	ENSPPYG00000004685	R3HDM2	77	58.074	Pongo_abelii
ENSGMOG00000007961	r3hdm2	92	80.576	ENSPCAG00000014642	R3HDM2	92	82.374	Procavia_capensis
ENSGMOG00000007961	r3hdm2	100	60.887	ENSPCOG00000013201	R3HDM2	95	62.562	Propithecus_coquereli
ENSGMOG00000007961	r3hdm2	100	65.123	ENSPVAG00000003967	R3HDM2	95	65.911	Pteropus_vampyrus
ENSGMOG00000007961	r3hdm2	99	74.421	ENSPNYG00000013479	r3hdm2	100	74.323	Pundamilia_nyererei
ENSGMOG00000007961	r3hdm2	94	80.583	ENSPNAG00000017473	r3hdm2	95	74.209	Pygocentrus_nattereri
ENSGMOG00000007961	r3hdm2	100	63.761	ENSRNOG00000007801	R3hdm2	95	64.447	Rattus_norvegicus
ENSGMOG00000007961	r3hdm2	100	59.823	ENSRBIG00000037403	R3HDM2	95	61.040	Rhinopithecus_bieti
ENSGMOG00000007961	r3hdm2	100	64.300	ENSRROG00000022271	R3HDM2	95	65.388	Rhinopithecus_roxellana
ENSGMOG00000007961	r3hdm2	100	61.440	ENSSBOG00000023547	R3HDM2	95	63.003	Saimiri_boliviensis_boliviensis
ENSGMOG00000007961	r3hdm2	100	61.863	ENSSHAG00000003511	R3HDM2	95	62.977	Sarcophilus_harrisii
ENSGMOG00000007961	r3hdm2	99	74.625	ENSSFOG00015011219	r3hdm2	99	74.925	Scleropages_formosus
ENSGMOG00000007961	r3hdm2	100	82.087	ENSSMAG00000012073	r3hdm2	95	82.220	Scophthalmus_maximus
ENSGMOG00000007961	r3hdm2	100	82.192	ENSSDUG00000019269	r3hdm2	95	82.779	Seriola_dumerili
ENSGMOG00000007961	r3hdm2	100	83.855	ENSSLDG00000005252	r3hdm2	95	83.659	Seriola_lalandi_dorsalis
ENSGMOG00000007961	r3hdm2	81	62.876	ENSSARG00000003958	R3HDM2	81	63.090	Sorex_araneus
ENSGMOG00000007961	r3hdm2	100	57.880	ENSSPUG00000014132	R3HDM2	95	58.040	Sphenodon_punctatus
ENSGMOG00000007961	r3hdm2	100	82.376	ENSSPAG00000022594	r3hdm2	100	77.722	Stegastes_partitus
ENSGMOG00000007961	r3hdm2	95	66.309	ENSSSCG00000026498	R3HDM2	100	64.516	Sus_scrofa
ENSGMOG00000007961	r3hdm2	73	62.670	ENSTGUG00000015881	R3HDM2	93	62.842	Taeniopygia_guttata
ENSGMOG00000007961	r3hdm2	100	73.050	ENSTRUG00000015075	r3hdm2	99	72.502	Takifugu_rubripes
ENSGMOG00000007961	r3hdm2	92	95.702	ENSTNIG00000007057	r3hdm2	84	94.134	Tetraodon_nigroviridis
ENSGMOG00000007961	r3hdm2	77	66.426	ENSTBEG00000015967	R3HDM2	73	67.148	Tupaia_belangeri
ENSGMOG00000007961	r3hdm2	90	73.094	ENSTTRG00000013082	R3HDM2	87	73.378	Tursiops_truncatus
ENSGMOG00000007961	r3hdm2	95	68.000	ENSUAMG00000020913	R3HDM2	95	65.119	Ursus_americanus
ENSGMOG00000007961	r3hdm2	91	68.053	ENSUMAG00000019179	R3HDM2	94	63.830	Ursus_maritimus
ENSGMOG00000007961	r3hdm2	94	81.271	ENSVPAG00000008656	R3HDM2	88	83.929	Vicugna_pacos
ENSGMOG00000007961	r3hdm2	93	70.518	ENSVVUG00000018014	R3HDM2	92	65.895	Vulpes_vulpes
ENSGMOG00000007961	r3hdm2	100	61.057	ENSXETG00000017153	r3hdm2	95	61.252	Xenopus_tropicalis
ENSGMOG00000007961	r3hdm2	92	73.448	ENSXCOG00000013882	r3hdm2	100	74.090	Xiphophorus_couchianus
ENSGMOG00000007961	r3hdm2	100	81.934	ENSXMAG00000017978	r3hdm2	95	82.031	Xiphophorus_maculatus