EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008139 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 33635 bases
Position: chrGeneScaffold_516:38140-71774
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008713	CPSF_A	PF03178.15	7.5e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008957	-	3654	-	ENSGMOP00000008713	1218 (aa)	-	UPI00023F13DE

Gene Model

Click here to download ENSGMOG00000008139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008139	sf3b3	100	89.409	ENSG00000189091	SF3B3	100	96.491	Homo_sapiens
ENSGMOG00000008139	sf3b3	96	93.003	ENSAPOG00000006172	sf3b3	98	93.003	Acanthochromis_polyacanthus
ENSGMOG00000008139	sf3b3	100	89.271	ENSAMEG00000002187	SF3B3	100	89.271	Ailuropoda_melanoleuca
ENSGMOG00000008139	sf3b3	92	90.455	ENSACIG00000016487	sf3b3	100	90.455	Amphilophus_citrinellus
ENSGMOG00000008139	sf3b3	100	93.350	ENSAOCG00000007158	sf3b3	100	93.350	Amphiprion_ocellaris
ENSGMOG00000008139	sf3b3	100	93.350	ENSAPEG00000022786	sf3b3	100	93.350	Amphiprion_percula
ENSGMOG00000008139	sf3b3	100	93.678	ENSATEG00000013708	sf3b3	100	93.678	Anabas_testudineus
ENSGMOG00000008139	sf3b3	81	88.731	ENSAPLG00000004996	SF3B3	99	88.731	Anas_platyrhynchos
ENSGMOG00000008139	sf3b3	100	89.819	ENSACAG00000001817	SF3B3	100	89.819	Anolis_carolinensis
ENSGMOG00000008139	sf3b3	100	89.409	ENSANAG00000028001	SF3B3	100	89.409	Aotus_nancymaae
ENSGMOG00000008139	sf3b3	96	93.345	ENSACLG00000022555	sf3b3	98	93.345	Astatotilapia_calliptera
ENSGMOG00000008139	sf3b3	100	93.596	ENSAMXG00000003410	sf3b3	100	93.596	Astyanax_mexicanus
ENSGMOG00000008139	sf3b3	100	89.409	ENSBTAG00000010627	SF3B3	100	89.409	Bos_taurus
ENSGMOG00000008139	sf3b3	100	58.151	WBGene00019323	teg-4	100	58.151	Caenorhabditis_elegans
ENSGMOG00000008139	sf3b3	100	89.409	ENSCJAG00000014773	SF3B3	99	89.409	Callithrix_jacchus
ENSGMOG00000008139	sf3b3	100	89.491	ENSCAFG00000020151	SF3B3	100	89.491	Canis_familiaris
ENSGMOG00000008139	sf3b3	100	89.491	ENSCAFG00020020912	SF3B3	100	89.491	Canis_lupus_dingo
ENSGMOG00000008139	sf3b3	100	89.491	ENSCHIG00000019822	SF3B3	100	89.491	Capra_hircus
ENSGMOG00000008139	sf3b3	100	89.409	ENSTSYG00000007910	SF3B3	100	89.409	Carlito_syrichta
ENSGMOG00000008139	sf3b3	78	79.176	ENSCAPG00000001484	SF3B3	86	79.176	Cavia_aperea
ENSGMOG00000008139	sf3b3	100	88.095	ENSCPOG00000000586	SF3B3	100	88.095	Cavia_porcellus
ENSGMOG00000008139	sf3b3	100	89.409	ENSCCAG00000017736	SF3B3	100	89.409	Cebus_capucinus
ENSGMOG00000008139	sf3b3	100	89.409	ENSCATG00000036562	SF3B3	100	89.409	Cercocebus_atys
ENSGMOG00000008139	sf3b3	100	89.409	ENSCLAG00000003921	SF3B3	100	89.409	Chinchilla_lanigera
ENSGMOG00000008139	sf3b3	100	89.409	ENSCSAG00000004371	SF3B3	100	89.409	Chlorocebus_sabaeus
ENSGMOG00000008139	sf3b3	90	88.785	ENSCHOG00000001878	SF3B3	90	88.785	Choloepus_hoffmanni
ENSGMOG00000008139	sf3b3	100	89.245	ENSCPBG00000015853	SF3B3	100	89.245	Chrysemys_picta_bellii
ENSGMOG00000008139	sf3b3	100	76.538	ENSCING00000001342	-	100	76.538	Ciona_intestinalis
ENSGMOG00000008139	sf3b3	99	75.554	ENSCSAVG00000011454	-	100	75.554	Ciona_savignyi
ENSGMOG00000008139	sf3b3	100	85.796	ENSCANG00000042920	SF3B3	100	86.289	Colobus_angolensis_palliatus
ENSGMOG00000008139	sf3b3	100	89.327	ENSCGRG00001015908	Sf3b3	100	89.327	Cricetulus_griseus_chok1gshd
ENSGMOG00000008139	sf3b3	100	89.327	ENSCGRG00000010180	Sf3b3	100	89.327	Cricetulus_griseus_crigri
ENSGMOG00000008139	sf3b3	81	92.589	ENSCSEG00000014192	sf3b3	98	92.589	Cynoglossus_semilaevis
ENSGMOG00000008139	sf3b3	100	93.268	ENSCVAG00000010459	sf3b3	100	93.268	Cyprinodon_variegatus
ENSGMOG00000008139	sf3b3	100	93.350	ENSDARG00000103553	sf3b3	100	93.350	Danio_rerio
ENSGMOG00000008139	sf3b3	85	88.536	ENSDNOG00000043626	SF3B3	100	88.536	Dasypus_novemcinctus
ENSGMOG00000008139	sf3b3	100	89.409	ENSDORG00000014176	Sf3b3	100	89.409	Dipodomys_ordii
ENSGMOG00000008139	sf3b3	100	71.405	FBgn0035162	Sf3b3	100	71.405	Drosophila_melanogaster
ENSGMOG00000008139	sf3b3	84	95.359	ENSETEG00000002729	SF3B3	84	95.359	Echinops_telfairi
ENSGMOG00000008139	sf3b3	100	83.169	ENSEBUG00000006117	sf3b3	100	83.169	Eptatretus_burgeri
ENSGMOG00000008139	sf3b3	100	89.491	ENSEASG00005013376	SF3B3	100	89.491	Equus_asinus_asinus
ENSGMOG00000008139	sf3b3	100	89.491	ENSECAG00000014053	SF3B3	100	89.491	Equus_caballus
ENSGMOG00000008139	sf3b3	93	89.464	ENSEEUG00000015611	SF3B3	93	89.464	Erinaceus_europaeus
ENSGMOG00000008139	sf3b3	100	92.547	ENSELUG00000015417	sf3b3	100	92.547	Esox_lucius
ENSGMOG00000008139	sf3b3	100	89.491	ENSFCAG00000009487	SF3B3	100	89.491	Felis_catus
ENSGMOG00000008139	sf3b3	100	89.163	ENSFALG00000007372	SF3B3	100	89.163	Ficedula_albicollis
ENSGMOG00000008139	sf3b3	100	89.409	ENSFDAG00000002608	SF3B3	100	89.409	Fukomys_damarensis
ENSGMOG00000008139	sf3b3	100	93.760	ENSFHEG00000017824	sf3b3	100	93.760	Fundulus_heteroclitus
ENSGMOG00000008139	sf3b3	100	89.327	ENSGALG00000002531	SF3B3	100	89.327	Gallus_gallus
ENSGMOG00000008139	sf3b3	100	93.268	ENSGAFG00000015206	sf3b3	100	93.268	Gambusia_affinis
ENSGMOG00000008139	sf3b3	100	93.924	ENSGACG00000002646	sf3b3	100	93.924	Gasterosteus_aculeatus
ENSGMOG00000008139	sf3b3	96	89.249	ENSGAGG00000006746	SF3B3	97	89.249	Gopherus_agassizii
ENSGMOG00000008139	sf3b3	100	89.409	ENSGGOG00000003246	SF3B3	100	89.409	Gorilla_gorilla
ENSGMOG00000008139	sf3b3	92	85.459	ENSHBUG00000005960	sf3b3	100	86.441	Haplochromis_burtoni
ENSGMOG00000008139	sf3b3	100	89.409	ENSHGLG00000010135	SF3B3	100	89.409	Heterocephalus_glaber_female
ENSGMOG00000008139	sf3b3	100	87.358	ENSHGLG00100011148	SF3B3	100	87.358	Heterocephalus_glaber_male
ENSGMOG00000008139	sf3b3	100	93.103	ENSHCOG00000011981	sf3b3	100	93.103	Hippocampus_comes
ENSGMOG00000008139	sf3b3	100	93.678	ENSIPUG00000020435	sf3b3	100	93.678	Ictalurus_punctatus
ENSGMOG00000008139	sf3b3	100	89.409	ENSSTOG00000007065	SF3B3	100	89.409	Ictidomys_tridecemlineatus
ENSGMOG00000008139	sf3b3	100	89.409	ENSJJAG00000003948	Sf3b3	100	89.409	Jaculus_jaculus
ENSGMOG00000008139	sf3b3	100	91.133	ENSKMAG00000004066	sf3b3	99	93.003	Kryptolebias_marmoratus
ENSGMOG00000008139	sf3b3	100	93.350	ENSLBEG00000018302	sf3b3	100	93.350	Labrus_bergylta
ENSGMOG00000008139	sf3b3	98	86.462	ENSLACG00000012501	SF3B3	99	86.462	Latimeria_chalumnae
ENSGMOG00000008139	sf3b3	100	92.529	ENSLOCG00000007566	sf3b3	100	92.529	Lepisosteus_oculatus
ENSGMOG00000008139	sf3b3	100	89.491	ENSLAFG00000012219	SF3B3	100	89.491	Loxodonta_africana
ENSGMOG00000008139	sf3b3	100	89.409	ENSMFAG00000045487	SF3B3	100	89.409	Macaca_fascicularis
ENSGMOG00000008139	sf3b3	100	89.409	ENSMMUG00000017812	SF3B3	100	89.409	Macaca_mulatta
ENSGMOG00000008139	sf3b3	100	89.409	ENSMNEG00000033385	SF3B3	100	89.409	Macaca_nemestrina
ENSGMOG00000008139	sf3b3	100	85.878	ENSMLEG00000043891	SF3B3	100	85.878	Mandrillus_leucophaeus
ENSGMOG00000008139	sf3b3	100	93.514	ENSMAMG00000016837	sf3b3	100	93.514	Mastacembelus_armatus
ENSGMOG00000008139	sf3b3	89	90.018	ENSMZEG00005026015	sf3b3	99	90.018	Maylandia_zebra
ENSGMOG00000008139	sf3b3	100	93.596	ENSMZEG00005010836	sf3b3	100	93.596	Maylandia_zebra
ENSGMOG00000008139	sf3b3	100	89.327	ENSMGAG00000001597	SF3B3	100	89.327	Meleagris_gallopavo
ENSGMOG00000008139	sf3b3	75	80.692	ENSMAUG00000013618	Sf3b3	92	80.692	Mesocricetus_auratus
ENSGMOG00000008139	sf3b3	100	88.443	ENSMICG00000001363	SF3B3	100	88.443	Microcebus_murinus
ENSGMOG00000008139	sf3b3	100	89.327	ENSMOCG00000006108	Sf3b3	100	89.327	Microtus_ochrogaster
ENSGMOG00000008139	sf3b3	89	90.296	ENSMMOG00000002598	sf3b3	97	90.296	Mola_mola
ENSGMOG00000008139	sf3b3	100	85.398	ENSMODG00000014363	SF3B3	100	85.398	Monodelphis_domestica
ENSGMOG00000008139	sf3b3	100	93.103	ENSMALG00000008014	sf3b3	100	93.103	Monopterus_albus
ENSGMOG00000008139	sf3b3	100	89.327	MGP_CAROLIEiJ_G0031563	Sf3b3	100	89.327	Mus_caroli
ENSGMOG00000008139	sf3b3	100	89.327	ENSMUSG00000033732	Sf3b3	100	89.327	Mus_musculus
ENSGMOG00000008139	sf3b3	100	89.327	MGP_SPRETEiJ_G0032681	Sf3b3	100	89.327	Mus_spretus
ENSGMOG00000008139	sf3b3	100	89.491	ENSMPUG00000010277	SF3B3	100	89.491	Mustela_putorius_furo
ENSGMOG00000008139	sf3b3	100	89.409	ENSMLUG00000014607	SF3B3	100	89.409	Myotis_lucifugus
ENSGMOG00000008139	sf3b3	100	89.409	ENSNGAG00000021903	Sf3b3	100	89.409	Nannospalax_galili
ENSGMOG00000008139	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSGMOG00000008139	sf3b3	100	87.941	ENSNLEG00000016127	SF3B3	100	87.941	Nomascus_leucogenys
ENSGMOG00000008139	sf3b3	85	94.930	ENSMEUG00000004479	SF3B3	86	94.930	Notamacropus_eugenii
ENSGMOG00000008139	sf3b3	98	86.265	ENSOPRG00000009847	SF3B3	100	86.265	Ochotona_princeps
ENSGMOG00000008139	sf3b3	100	89.409	ENSODEG00000014154	SF3B3	100	89.409	Octodon_degus
ENSGMOG00000008139	sf3b3	100	93.432	ENSONIG00000011198	sf3b3	100	93.432	Oreochromis_niloticus
ENSGMOG00000008139	sf3b3	100	89.573	ENSOANG00000001161	-	100	89.573	Ornithorhynchus_anatinus
ENSGMOG00000008139	sf3b3	100	87.438	ENSOCUG00000004139	SF3B3	100	87.438	Oryctolagus_cuniculus
ENSGMOG00000008139	sf3b3	100	93.268	ENSORLG00000013472	sf3b3	100	93.268	Oryzias_latipes
ENSGMOG00000008139	sf3b3	100	93.268	ENSORLG00020017473	sf3b3	100	93.268	Oryzias_latipes_hni
ENSGMOG00000008139	sf3b3	100	93.432	ENSORLG00015007710	sf3b3	100	93.432	Oryzias_latipes_hsok
ENSGMOG00000008139	sf3b3	100	92.939	ENSOMEG00000014483	sf3b3	100	92.939	Oryzias_melastigma
ENSGMOG00000008139	sf3b3	100	89.107	ENSOGAG00000016051	SF3B3	100	89.107	Otolemur_garnettii
ENSGMOG00000008139	sf3b3	100	89.271	ENSOARG00000004816	SF3B3	100	89.271	Ovis_aries
ENSGMOG00000008139	sf3b3	100	89.409	ENSPPAG00000026807	SF3B3	100	89.409	Pan_paniscus
ENSGMOG00000008139	sf3b3	100	89.491	ENSPPRG00000001686	SF3B3	100	89.491	Panthera_pardus
ENSGMOG00000008139	sf3b3	89	86.213	ENSPTIG00000020382	SF3B3	100	86.213	Panthera_tigris_altaica
ENSGMOG00000008139	sf3b3	100	89.409	ENSPTRG00000008308	SF3B3	100	89.409	Pan_troglodytes
ENSGMOG00000008139	sf3b3	100	89.409	ENSPANG00000024075	SF3B3	100	89.409	Papio_anubis
ENSGMOG00000008139	sf3b3	100	93.021	ENSPKIG00000002712	sf3b3	100	93.021	Paramormyrops_kingsleyae
ENSGMOG00000008139	sf3b3	89	89.062	ENSPSIG00000002232	SF3B3	100	89.062	Pelodiscus_sinensis
ENSGMOG00000008139	sf3b3	100	89.327	ENSPEMG00000008603	Sf3b3	100	89.327	Peromyscus_maniculatus_bairdii
ENSGMOG00000008139	sf3b3	100	86.617	ENSPMAG00000001793	sf3b3	100	86.617	Petromyzon_marinus
ENSGMOG00000008139	sf3b3	100	89.573	ENSPCIG00000014927	SF3B3	100	89.573	Phascolarctos_cinereus
ENSGMOG00000008139	sf3b3	100	93.350	ENSPFOG00000015516	sf3b3	100	93.350	Poecilia_formosa
ENSGMOG00000008139	sf3b3	100	93.350	ENSPLAG00000014330	sf3b3	100	93.350	Poecilia_latipinna
ENSGMOG00000008139	sf3b3	100	93.432	ENSPMEG00000019856	sf3b3	100	93.432	Poecilia_mexicana
ENSGMOG00000008139	sf3b3	81	92.792	ENSPREG00000019669	sf3b3	97	92.792	Poecilia_reticulata
ENSGMOG00000008139	sf3b3	95	92.537	ENSPPYG00000007539	SF3B3	100	92.537	Pongo_abelii
ENSGMOG00000008139	sf3b3	93	77.746	ENSPCAG00000002623	SF3B3	93	77.746	Procavia_capensis
ENSGMOG00000008139	sf3b3	81	97.101	ENSPCOG00000026582	SF3B3	97	97.101	Propithecus_coquereli
ENSGMOG00000008139	sf3b3	100	89.409	ENSPVAG00000000684	SF3B3	100	89.409	Pteropus_vampyrus
ENSGMOG00000008139	sf3b3	100	93.678	ENSPNYG00000003528	sf3b3	100	93.678	Pundamilia_nyererei
ENSGMOG00000008139	sf3b3	100	93.514	ENSPNAG00000015419	sf3b3	100	93.514	Pygocentrus_nattereri
ENSGMOG00000008139	sf3b3	100	89.327	ENSRNOG00000017724	Sf3b3	100	89.327	Rattus_norvegicus
ENSGMOG00000008139	sf3b3	100	89.409	ENSRBIG00000021904	SF3B3	100	89.409	Rhinopithecus_bieti
ENSGMOG00000008139	sf3b3	100	89.409	ENSRROG00000045703	SF3B3	100	89.409	Rhinopithecus_roxellana
ENSGMOG00000008139	sf3b3	100	89.409	ENSSBOG00000029156	SF3B3	100	89.409	Saimiri_boliviensis_boliviensis
ENSGMOG00000008139	sf3b3	100	89.573	ENSSHAG00000000372	SF3B3	100	89.573	Sarcophilus_harrisii
ENSGMOG00000008139	sf3b3	100	93.103	ENSSFOG00015012877	sf3b3	100	93.103	Scleropages_formosus
ENSGMOG00000008139	sf3b3	100	93.678	ENSSMAG00000014386	sf3b3	100	93.678	Scophthalmus_maximus
ENSGMOG00000008139	sf3b3	100	94.253	ENSSDUG00000021201	sf3b3	100	94.253	Seriola_dumerili
ENSGMOG00000008139	sf3b3	100	94.171	ENSSLDG00000017532	sf3b3	100	94.171	Seriola_lalandi_dorsalis
ENSGMOG00000008139	sf3b3	93	91.304	ENSSARG00000006917	SF3B3	93	91.304	Sorex_araneus
ENSGMOG00000008139	sf3b3	100	89.409	ENSSPUG00000006253	SF3B3	100	89.409	Sphenodon_punctatus
ENSGMOG00000008139	sf3b3	100	85.632	ENSSPAG00000003125	sf3b3	100	85.632	Stegastes_partitus
ENSGMOG00000008139	sf3b3	100	89.491	ENSSSCG00000025323	SF3B3	100	89.491	Sus_scrofa
ENSGMOG00000008139	sf3b3	100	89.336	ENSTGUG00000006082	SF3B3	100	89.336	Taeniopygia_guttata
ENSGMOG00000008139	sf3b3	89	92.470	ENSTNIG00000004857	sf3b3	100	92.470	Tetraodon_nigroviridis
ENSGMOG00000008139	sf3b3	86	89.049	ENSTBEG00000002946	SF3B3	92	89.049	Tupaia_belangeri
ENSGMOG00000008139	sf3b3	100	89.080	ENSTTRG00000005855	SF3B3	100	89.080	Tursiops_truncatus
ENSGMOG00000008139	sf3b3	100	89.491	ENSUAMG00000006780	SF3B3	100	89.491	Ursus_americanus
ENSGMOG00000008139	sf3b3	100	89.491	ENSUMAG00000017757	SF3B3	100	89.491	Ursus_maritimus
ENSGMOG00000008139	sf3b3	100	74.795	ENSVPAG00000003202	SF3B3	100	74.795	Vicugna_pacos
ENSGMOG00000008139	sf3b3	100	89.491	ENSVVUG00000017922	SF3B3	100	89.491	Vulpes_vulpes
ENSGMOG00000008139	sf3b3	100	89.245	ENSXETG00000032869	SF3B3	100	89.245	Xenopus_tropicalis
ENSGMOG00000008139	sf3b3	77	92.471	ENSXCOG00000013628	sf3b3	97	92.471	Xiphophorus_couchianus
ENSGMOG00000008139	sf3b3	100	93.186	ENSXMAG00000006334	sf3b3	100	93.186	Xiphophorus_maculatus