EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008143 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2576 bases
Position: chrGeneScaffold_3720:45135-47710
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008716	PseudoU_synth_1	PF01416.20	6.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000008960	-	1167	-	ENSGMOP00000008716	388 (aa)	-	UPI00023F13E2

Gene Model

Click here to download ENSGMOG00000008143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008143	pus1	89	68.116	ENSG00000177192	PUS1	89	68.116	Homo_sapiens
ENSGMOG00000008143	pus1	99	75.573	ENSAPOG00000007254	pus1	93	75.573	Acanthochromis_polyacanthus
ENSGMOG00000008143	pus1	88	67.930	ENSAMEG00000013715	PUS1	83	67.930	Ailuropoda_melanoleuca
ENSGMOG00000008143	pus1	99	73.969	ENSACIG00000009169	pus1	94	73.969	Amphilophus_citrinellus
ENSGMOG00000008143	pus1	99	75.827	ENSAOCG00000022207	pus1	93	75.827	Amphiprion_ocellaris
ENSGMOG00000008143	pus1	99	75.827	ENSAPEG00000006039	pus1	96	77.984	Amphiprion_percula
ENSGMOG00000008143	pus1	96	76.923	ENSATEG00000020688	pus1	96	76.923	Anabas_testudineus
ENSGMOG00000008143	pus1	90	66.477	ENSACAG00000007367	PUS1	94	66.477	Anolis_carolinensis
ENSGMOG00000008143	pus1	78	69.967	ENSANAG00000036192	PUS1	93	69.967	Aotus_nancymaae
ENSGMOG00000008143	pus1	99	74.300	ENSACLG00000020868	pus1	100	74.169	Astatotilapia_calliptera
ENSGMOG00000008143	pus1	96	71.505	ENSAMXG00000008710	pus1	86	71.505	Astyanax_mexicanus
ENSGMOG00000008143	pus1	89	68.116	ENSBTAG00000012990	PUS1	86	68.116	Bos_taurus
ENSGMOG00000008143	pus1	91	39.037	WBGene00004248	pus-1	88	39.037	Caenorhabditis_elegans
ENSGMOG00000008143	pus1	65	66.929	ENSCJAG00000003720	PUS1	70	66.667	Callithrix_jacchus
ENSGMOG00000008143	pus1	86	68.769	ENSCAFG00000006429	PUS1	83	68.769	Canis_familiaris
ENSGMOG00000008143	pus1	86	68.769	ENSCAFG00020010737	PUS1	77	68.769	Canis_lupus_dingo
ENSGMOG00000008143	pus1	89	68.406	ENSCHIG00000000487	PUS1	86	68.406	Capra_hircus
ENSGMOG00000008143	pus1	88	69.388	ENSTSYG00000032605	PUS1	93	69.164	Carlito_syrichta
ENSGMOG00000008143	pus1	77	68.562	ENSCAPG00000006421	PUS1	94	68.317	Cavia_aperea
ENSGMOG00000008143	pus1	94	61.257	ENSCPOG00000001027	PUS1	91	61.140	Cavia_porcellus
ENSGMOG00000008143	pus1	88	67.930	ENSCCAG00000015879	PUS1	84	69.180	Cebus_capucinus
ENSGMOG00000008143	pus1	89	67.246	ENSCATG00000032870	PUS1	83	69.180	Cercocebus_atys
ENSGMOG00000008143	pus1	90	65.143	ENSCLAG00000011689	PUS1	90	61.842	Chinchilla_lanigera
ENSGMOG00000008143	pus1	89	67.536	ENSCSAG00000001879	PUS1	80	67.536	Chlorocebus_sabaeus
ENSGMOG00000008143	pus1	79	68.182	ENSCPBG00000024715	PUS1	93	65.749	Chrysemys_picta_bellii
ENSGMOG00000008143	pus1	88	44.282	ENSCING00000009426	-	91	44.282	Ciona_intestinalis
ENSGMOG00000008143	pus1	82	45.141	ENSCSAVG00000003751	-	66	45.141	Ciona_savignyi
ENSGMOG00000008143	pus1	89	60.231	ENSCANG00000035561	PUS1	83	62.662	Colobus_angolensis_palliatus
ENSGMOG00000008143	pus1	89	68.497	ENSCGRG00001019592	Pus1	81	68.497	Cricetulus_griseus_chok1gshd
ENSGMOG00000008143	pus1	89	68.497	ENSCGRG00000004048	Pus1	86	69.412	Cricetulus_griseus_crigri
ENSGMOG00000008143	pus1	99	73.028	ENSCSEG00000003629	pus1	94	73.028	Cynoglossus_semilaevis
ENSGMOG00000008143	pus1	99	73.657	ENSCVAG00000001265	pus1	94	73.657	Cyprinodon_variegatus
ENSGMOG00000008143	pus1	94	68.320	ENSDARG00000045562	pus1	95	71.321	Danio_rerio
ENSGMOG00000008143	pus1	89	66.667	ENSDNOG00000045576	PUS1	98	66.460	Dasypus_novemcinctus
ENSGMOG00000008143	pus1	78	68.977	ENSDORG00000011455	Pus1	93	68.977	Dipodomys_ordii
ENSGMOG00000008143	pus1	84	47.748	FBgn0038811	PUS1	79	47.748	Drosophila_melanogaster
ENSGMOG00000008143	pus1	88	69.501	ENSETEG00000019160	PUS1	84	69.565	Echinops_telfairi
ENSGMOG00000008143	pus1	89	42.350	ENSEBUG00000000368	-	69	41.470	Eptatretus_burgeri
ENSGMOG00000008143	pus1	90	66.952	ENSEASG00005016535	PUS1	81	66.952	Equus_asinus_asinus
ENSGMOG00000008143	pus1	90	67.236	ENSECAG00000006965	PUS1	88	67.236	Equus_caballus
ENSGMOG00000008143	pus1	98	72.539	ENSELUG00000010424	pus1	98	72.539	Esox_lucius
ENSGMOG00000008143	pus1	89	67.536	ENSFCAG00000010780	PUS1	81	67.536	Felis_catus
ENSGMOG00000008143	pus1	99	62.129	ENSFALG00000008273	PUS1	94	62.129	Ficedula_albicollis
ENSGMOG00000008143	pus1	86	68.862	ENSFDAG00000012518	PUS1	81	68.862	Fukomys_damarensis
ENSGMOG00000008143	pus1	99	75.765	ENSFHEG00000010504	pus1	94	75.765	Fundulus_heteroclitus
ENSGMOG00000008143	pus1	91	67.416	ENSGALG00000002354	PUS1	87	67.416	Gallus_gallus
ENSGMOG00000008143	pus1	99	74.680	ENSGAFG00000006578	pus1	94	74.680	Gambusia_affinis
ENSGMOG00000008143	pus1	99	77.608	ENSGACG00000017566	pus1	96	79.576	Gasterosteus_aculeatus
ENSGMOG00000008143	pus1	84	66.055	ENSGAGG00000016730	-	94	66.055	Gopherus_agassizii
ENSGMOG00000008143	pus1	89	68.406	ENSGGOG00000009178	PUS1	81	70.492	Gorilla_gorilla
ENSGMOG00000008143	pus1	99	74.809	ENSHBUG00000001316	pus1	100	74.680	Haplochromis_burtoni
ENSGMOG00000008143	pus1	90	64.571	ENSHGLG00000016086	PUS1	89	64.571	Heterocephalus_glaber_female
ENSGMOG00000008143	pus1	90	64.286	ENSHGLG00100019362	PUS1	89	64.286	Heterocephalus_glaber_male
ENSGMOG00000008143	pus1	96	73.600	ENSHCOG00000014288	pus1	86	73.600	Hippocampus_comes
ENSGMOG00000008143	pus1	96	72.581	ENSIPUG00000010387	pus1	88	74.504	Ictalurus_punctatus
ENSGMOG00000008143	pus1	91	67.232	ENSSTOG00000011245	PUS1	83	67.232	Ictidomys_tridecemlineatus
ENSGMOG00000008143	pus1	94	66.120	ENSJJAG00000000088	Pus1	86	66.120	Jaculus_jaculus
ENSGMOG00000008143	pus1	98	72.010	ENSKMAG00000012702	pus1	94	72.010	Kryptolebias_marmoratus
ENSGMOG00000008143	pus1	99	72.959	ENSLBEG00000002845	pus1	97	72.959	Labrus_bergylta
ENSGMOG00000008143	pus1	83	58.696	ENSLACG00000016044	-	97	58.696	Latimeria_chalumnae
ENSGMOG00000008143	pus1	92	65.738	ENSLACG00000018598	PUS1	92	64.151	Latimeria_chalumnae
ENSGMOG00000008143	pus1	96	67.885	ENSLOCG00000006127	pus1	96	67.885	Lepisosteus_oculatus
ENSGMOG00000008143	pus1	89	69.275	ENSLAFG00000028731	PUS1	92	69.275	Loxodonta_africana
ENSGMOG00000008143	pus1	89	67.723	ENSMFAG00000041194	PUS1	85	67.723	Macaca_fascicularis
ENSGMOG00000008143	pus1	89	67.536	ENSMMUG00000031463	PUS1	89	67.536	Macaca_mulatta
ENSGMOG00000008143	pus1	89	67.536	ENSMNEG00000002814	PUS1	83	69.508	Macaca_nemestrina
ENSGMOG00000008143	pus1	79	69.508	ENSMLEG00000043560	PUS1	93	69.637	Mandrillus_leucophaeus
ENSGMOG00000008143	pus1	99	74.809	ENSMAMG00000007371	pus1	93	74.809	Mastacembelus_armatus
ENSGMOG00000008143	pus1	99	74.300	ENSMZEG00005017746	pus1	93	74.300	Maylandia_zebra
ENSGMOG00000008143	pus1	80	70.513	ENSMGAG00000001958	PUS1	95	70.513	Meleagris_gallopavo
ENSGMOG00000008143	pus1	93	65.651	ENSMAUG00000001482	Pus1	85	65.651	Mesocricetus_auratus
ENSGMOG00000008143	pus1	83	71.207	ENSMICG00000030980	PUS1	85	67.826	Microcebus_murinus
ENSGMOG00000008143	pus1	93	65.097	ENSMOCG00000022311	Pus1	85	65.097	Microtus_ochrogaster
ENSGMOG00000008143	pus1	94	74.521	ENSMMOG00000021022	pus1	94	74.521	Mola_mola
ENSGMOG00000008143	pus1	83	68.847	ENSMODG00000015551	PUS1	77	67.347	Monodelphis_domestica
ENSGMOG00000008143	pus1	96	77.128	ENSMALG00000013202	pus1	89	77.128	Monopterus_albus
ENSGMOG00000008143	pus1	97	63.613	MGP_CAROLIEiJ_G0027551	Pus1	92	65.746	Mus_caroli
ENSGMOG00000008143	pus1	97	63.613	ENSMUSG00000029507	Pus1	92	65.746	Mus_musculus
ENSGMOG00000008143	pus1	98	60.599	MGP_PahariEiJ_G0024133	Pus1	92	65.565	Mus_pahari
ENSGMOG00000008143	pus1	97	63.613	MGP_SPRETEiJ_G0028549	Pus1	92	65.746	Mus_spretus
ENSGMOG00000008143	pus1	84	69.632	ENSMPUG00000002314	PUS1	82	69.632	Mustela_putorius_furo
ENSGMOG00000008143	pus1	91	63.510	ENSMLUG00000015790	PUS1	98	63.510	Myotis_lucifugus
ENSGMOG00000008143	pus1	91	66.667	ENSNGAG00000012976	Pus1	83	66.667	Nannospalax_galili
ENSGMOG00000008143	pus1	99	75.000	ENSNBRG00000020502	pus1	98	77.049	Neolamprologus_brichardi
ENSGMOG00000008143	pus1	84	68.308	ENSNLEG00000008505	PUS1	92	69.728	Nomascus_leucogenys
ENSGMOG00000008143	pus1	86	61.976	ENSMEUG00000002825	PUS1	89	61.976	Notamacropus_eugenii
ENSGMOG00000008143	pus1	85	60.725	ENSOPRG00000002701	-	87	60.725	Ochotona_princeps
ENSGMOG00000008143	pus1	91	65.254	ENSODEG00000008248	PUS1	93	65.254	Octodon_degus
ENSGMOG00000008143	pus1	99	73.552	ENSONIG00000003803	pus1	100	73.552	Oreochromis_niloticus
ENSGMOG00000008143	pus1	91	66.295	ENSOANG00000010619	PUS1	81	66.295	Ornithorhynchus_anatinus
ENSGMOG00000008143	pus1	88	67.742	ENSOCUG00000007310	PUS1	75	67.826	Oryctolagus_cuniculus
ENSGMOG00000008143	pus1	99	72.265	ENSORLG00000010787	pus1	94	72.265	Oryzias_latipes
ENSGMOG00000008143	pus1	99	73.282	ENSORLG00020011483	pus1	94	73.282	Oryzias_latipes_hni
ENSGMOG00000008143	pus1	99	73.282	ENSORLG00015023012	pus1	96	74.400	Oryzias_latipes_hsok
ENSGMOG00000008143	pus1	97	73.753	ENSOMEG00000022655	pus1	90	73.753	Oryzias_melastigma
ENSGMOG00000008143	pus1	88	68.622	ENSOGAG00000008720	PUS1	89	68.406	Otolemur_garnettii
ENSGMOG00000008143	pus1	89	68.116	ENSOARG00000013316	PUS1	79	68.116	Ovis_aries
ENSGMOG00000008143	pus1	89	68.116	ENSPPAG00000040971	PUS1	81	70.492	Pan_paniscus
ENSGMOG00000008143	pus1	89	67.536	ENSPPRG00000015456	PUS1	87	67.536	Panthera_pardus
ENSGMOG00000008143	pus1	88	67.544	ENSPTIG00000004201	PUS1	89	67.536	Panthera_tigris_altaica
ENSGMOG00000008143	pus1	89	68.023	ENSPTRG00000005643	PUS1	81	70.395	Pan_troglodytes
ENSGMOG00000008143	pus1	89	67.442	ENSPANG00000000376	PUS1	83	69.408	Papio_anubis
ENSGMOG00000008143	pus1	92	65.833	ENSPKIG00000019369	pus1	87	62.857	Paramormyrops_kingsleyae
ENSGMOG00000008143	pus1	92	65.546	ENSPSIG00000016432	PUS1	87	63.467	Pelodiscus_sinensis
ENSGMOG00000008143	pus1	94	73.077	ENSPMGG00000004522	pus1	94	73.077	Periophthalmus_magnuspinnatus
ENSGMOG00000008143	pus1	93	65.556	ENSPEMG00000013448	Pus1	85	65.556	Peromyscus_maniculatus_bairdii
ENSGMOG00000008143	pus1	84	59.385	ENSPMAG00000004636	pus1	98	59.385	Petromyzon_marinus
ENSGMOG00000008143	pus1	78	60.596	ENSPCIG00000022609	-	75	58.438	Phascolarctos_cinereus
ENSGMOG00000008143	pus1	99	74.425	ENSPFOG00000019669	pus1	94	74.425	Poecilia_formosa
ENSGMOG00000008143	pus1	99	74.425	ENSPLAG00000007185	pus1	94	74.425	Poecilia_latipinna
ENSGMOG00000008143	pus1	99	74.425	ENSPLAG00000002692	-	94	74.425	Poecilia_latipinna
ENSGMOG00000008143	pus1	99	74.425	ENSPMEG00000006038	pus1	97	74.425	Poecilia_mexicana
ENSGMOG00000008143	pus1	99	74.425	ENSPMEG00000011115	PUS1	94	74.425	Poecilia_mexicana
ENSGMOG00000008143	pus1	99	73.846	ENSPREG00000007231	pus1	99	76.816	Poecilia_reticulata
ENSGMOG00000008143	pus1	89	67.341	ENSPPYG00000005132	PUS1	81	67.341	Pongo_abelii
ENSGMOG00000008143	pus1	67	66.165	ENSPCAG00000009110	-	65	66.165	Procavia_capensis
ENSGMOG00000008143	pus1	82	64.263	ENSPCOG00000015595	PUS1	85	60.000	Propithecus_coquereli
ENSGMOG00000008143	pus1	99	75.064	ENSPNYG00000013571	pus1	93	75.064	Pundamilia_nyererei
ENSGMOG00000008143	pus1	96	71.774	ENSPNAG00000003938	pus1	87	71.774	Pygocentrus_nattereri
ENSGMOG00000008143	pus1	93	65.746	ENSRNOG00000037500	Pus1	85	65.746	Rattus_norvegicus
ENSGMOG00000008143	pus1	89	68.300	ENSRBIG00000043177	PUS1	85	70.164	Rhinopithecus_bieti
ENSGMOG00000008143	pus1	89	68.300	ENSRROG00000039744	PUS1	82	70.107	Rhinopithecus_roxellana
ENSGMOG00000008143	pus1	79	42.222	YPL212C	-	56	42.222	Saccharomyces_cerevisiae
ENSGMOG00000008143	pus1	64	42.857	YGL063W	-	65	42.857	Saccharomyces_cerevisiae
ENSGMOG00000008143	pus1	84	69.846	ENSSBOG00000023593	PUS1	86	68.874	Saimiri_boliviensis_boliviensis
ENSGMOG00000008143	pus1	90	67.236	ENSSHAG00000013193	PUS1	85	67.236	Sarcophilus_harrisii
ENSGMOG00000008143	pus1	88	72.174	ENSSFOG00015003463	pus1	79	71.839	Scleropages_formosus
ENSGMOG00000008143	pus1	93	75.758	ENSSMAG00000019075	pus1	93	73.028	Scophthalmus_maximus
ENSGMOG00000008143	pus1	99	74.555	ENSSDUG00000007102	pus1	93	74.555	Seriola_dumerili
ENSGMOG00000008143	pus1	99	74.046	ENSSLDG00000022850	pus1	93	74.046	Seriola_lalandi_dorsalis
ENSGMOG00000008143	pus1	78	61.056	ENSSARG00000008367	PUS1	98	61.056	Sorex_araneus
ENSGMOG00000008143	pus1	86	70.359	ENSSPUG00000010009	PUS1	83	70.359	Sphenodon_punctatus
ENSGMOG00000008143	pus1	96	77.984	ENSSPAG00000006272	pus1	96	77.984	Stegastes_partitus
ENSGMOG00000008143	pus1	89	68.406	ENSSSCG00000009741	PUS1	86	68.406	Sus_scrofa
ENSGMOG00000008143	pus1	85	71.429	ENSTGUG00000008068	PUS1	99	71.429	Taeniopygia_guttata
ENSGMOG00000008143	pus1	95	72.826	ENSTRUG00000002198	pus1	92	72.826	Takifugu_rubripes
ENSGMOG00000008143	pus1	94	69.589	ENSTNIG00000003942	pus1	93	70.411	Tetraodon_nigroviridis
ENSGMOG00000008143	pus1	89	67.246	ENSTTRG00000000632	PUS1	81	67.246	Tursiops_truncatus
ENSGMOG00000008143	pus1	88	67.930	ENSUAMG00000017197	PUS1	87	67.930	Ursus_americanus
ENSGMOG00000008143	pus1	96	63.852	ENSUMAG00000002831	PUS1	96	69.159	Ursus_maritimus
ENSGMOG00000008143	pus1	89	67.246	ENSVVUG00000004199	PUS1	79	67.246	Vulpes_vulpes
ENSGMOG00000008143	pus1	68	30.496	ENSXETG00000024532	pus3	50	30.496	Xenopus_tropicalis
ENSGMOG00000008143	pus1	92	66.295	ENSXETG00000002030	pus1	89	66.295	Xenopus_tropicalis
ENSGMOG00000008143	pus1	82	49.226	ENSXETG00000033640	-	99	49.226	Xenopus_tropicalis
ENSGMOG00000008143	pus1	99	75.128	ENSXCOG00000004722	pus1	98	76.316	Xiphophorus_couchianus
ENSGMOG00000008143	pus1	99	75.192	ENSXMAG00000000988	pus1	94	75.192	Xiphophorus_maculatus