EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 22953 bases
Position: chrGeneScaffold_1125:245879-268831
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000008988	RRM_5	PF13893.6	1.6e-07	1	2
ENSGMOP00000008988	RRM_5	PF13893.6	1.6e-07	2	2
ENSGMOP00000008988	RRM_1	PF00076.22	1.7e-39	1	3
ENSGMOP00000008988	RRM_1	PF00076.22	1.7e-39	2	3
ENSGMOP00000008988	RRM_1	PF00076.22	1.7e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009234	-	10152	-	ENSGMOP00000008988	3383 (aa)	-	UPI00023F1318

Gene Model

Click here to download ENSGMOG00000008397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008397	-	88	65.726	ENSG00000065526	SPEN	85	90.079	Homo_sapiens
ENSGMOG00000008397	-	77	79.191	ENSAPOG00000011411	si:ch1073-335m2.2	86	77.901	Acanthochromis_polyacanthus
ENSGMOG00000008397	-	98	92.737	ENSAPOG00000009853	-	97	91.304	Acanthochromis_polyacanthus
ENSGMOG00000008397	-	95	65.737	ENSAMEG00000011817	SPEN	80	66.667	Ailuropoda_melanoleuca
ENSGMOG00000008397	-	98	92.737	ENSAOCG00000014505	-	97	91.304	Amphiprion_ocellaris
ENSGMOG00000008397	-	81	75.362	ENSAOCG00000008077	si:ch1073-335m2.2	68	75.362	Amphiprion_ocellaris
ENSGMOG00000008397	-	51	79.191	ENSAPEG00000013515	si:ch1073-335m2.2	92	77.901	Amphiprion_percula
ENSGMOG00000008397	-	98	92.737	ENSAPEG00000010288	-	97	91.304	Amphiprion_percula
ENSGMOG00000008397	-	93	79.769	ENSATEG00000007674	si:ch1073-335m2.2	73	77.348	Anabas_testudineus
ENSGMOG00000008397	-	98	91.209	ENSATEG00000005627	-	97	90.761	Anabas_testudineus
ENSGMOG00000008397	-	93	53.506	ENSAPLG00000012618	SPEN	100	43.725	Anas_platyrhynchos
ENSGMOG00000008397	-	80	70.520	ENSANAG00000034428	SPEN	79	65.863	Aotus_nancymaae
ENSGMOG00000008397	-	91	79.769	ENSACLG00000021433	si:ch1073-335m2.2	100	67.265	Astatotilapia_calliptera
ENSGMOG00000008397	-	98	89.385	ENSACLG00000016922	-	97	88.043	Astatotilapia_calliptera
ENSGMOG00000008397	-	98	85.475	ENSAMXG00000012485	spen	95	83.333	Astyanax_mexicanus
ENSGMOG00000008397	-	95	66.008	ENSBTAG00000018729	SPEN	81	66.008	Bos_taurus
ENSGMOG00000008397	-	80	79.888	ENSCJAG00000008527	SPEN	80	66.265	Callithrix_jacchus
ENSGMOG00000008397	-	78	53.541	ENSCAFG00000016132	-	82	54.640	Canis_familiaris
ENSGMOG00000008397	-	95	67.068	ENSCHIG00000025070	SPEN	81	67.068	Capra_hircus
ENSGMOG00000008397	-	78	67.755	ENSTSYG00000036016	SPEN	78	67.755	Carlito_syrichta
ENSGMOG00000008397	-	79	76.316	ENSCAPG00000013803	SPEN	81	76.316	Cavia_aperea
ENSGMOG00000008397	-	79	76.159	ENSCPOG00000014036	SPEN	80	76.159	Cavia_porcellus
ENSGMOG00000008397	-	95	66.265	ENSCCAG00000020258	SPEN	76	79.888	Cebus_capucinus
ENSGMOG00000008397	-	78	85.926	ENSCATG00000015079	SPEN	77	84.173	Cercocebus_atys
ENSGMOG00000008397	-	61	76.159	ENSCLAG00000002018	SPEN	64	76.159	Chinchilla_lanigera
ENSGMOG00000008397	-	83	76.617	ENSCSAG00000000841	SPEN	78	76.617	Chlorocebus_sabaeus
ENSGMOG00000008397	-	83	76.617	ENSCANG00000034547	SPEN	78	76.617	Colobus_angolensis_palliatus
ENSGMOG00000008397	-	65	67.500	ENSCGRG00001007725	Spen	63	67.500	Cricetulus_griseus_chok1gshd
ENSGMOG00000008397	-	61	76.159	ENSCGRG00000010581	Spen	59	76.159	Cricetulus_griseus_crigri
ENSGMOG00000008397	-	98	90.503	ENSCSEG00000003915	-	97	89.617	Cynoglossus_semilaevis
ENSGMOG00000008397	-	73	77.901	ENSCVAG00000009075	si:ch1073-335m2.2	52	77.901	Cyprinodon_variegatus
ENSGMOG00000008397	-	51	74.595	ENSDARG00000074332	si:ch1073-335m2.2	75	70.142	Danio_rerio
ENSGMOG00000008397	-	96	84.530	ENSDARG00000074245	spen	100	90.370	Danio_rerio
ENSGMOG00000008397	-	95	66.535	ENSDNOG00000041948	SPEN	85	47.176	Dasypus_novemcinctus
ENSGMOG00000008397	-	84	75.342	ENSDORG00000023909	Spen	79	75.342	Dipodomys_ordii
ENSGMOG00000008397	-	90	86.029	ENSEASG00005015911	SPEN	79	82.069	Equus_asinus_asinus
ENSGMOG00000008397	-	90	86.029	ENSECAG00000008833	SPEN	79	84.892	Equus_caballus
ENSGMOG00000008397	-	53	81.395	ENSEEUG00000010255	SPEN	58	81.395	Erinaceus_europaeus
ENSGMOG00000008397	-	87	80.000	ENSELUG00000007726	si:ch1073-335m2.2	92	75.258	Esox_lucius
ENSGMOG00000008397	-	83	75.342	ENSFDAG00000010212	SPEN	86	75.342	Fukomys_damarensis
ENSGMOG00000008397	-	80	78.035	ENSFHEG00000004544	si:ch1073-335m2.2	65	72.549	Fundulus_heteroclitus
ENSGMOG00000008397	-	99	91.061	ENSGAFG00000015819	-	97	89.130	Gambusia_affinis
ENSGMOG00000008397	-	90	79.191	ENSGACG00000001176	si:ch1073-335m2.2	75	50.720	Gasterosteus_aculeatus
ENSGMOG00000008397	-	98	90.217	ENSGACG00000005341	-	100	61.728	Gasterosteus_aculeatus
ENSGMOG00000008397	-	99	72.904	ENSGAGG00000020785	SPEN	93	48.490	Gopherus_agassizii
ENSGMOG00000008397	-	89	65.726	ENSGGOG00000012041	SPEN	80	65.726	Gorilla_gorilla
ENSGMOG00000008397	-	98	89.385	ENSHBUG00000020626	-	97	88.043	Haplochromis_burtoni
ENSGMOG00000008397	-	91	79.769	ENSHBUG00000023253	si:ch1073-335m2.2	100	67.265	Haplochromis_burtoni
ENSGMOG00000008397	-	69	79.888	ENSHGLG00000019259	SPEN	72	79.888	Heterocephalus_glaber_female
ENSGMOG00000008397	-	59	75.342	ENSHGLG00100019294	SPEN	64	75.342	Heterocephalus_glaber_male
ENSGMOG00000008397	-	98	83.889	ENSIPUG00000021668	spen	95	82.162	Ictalurus_punctatus
ENSGMOG00000008397	-	86	66.798	ENSSTOG00000021428	SPEN	83	66.798	Ictidomys_tridecemlineatus
ENSGMOG00000008397	-	66	65.863	ENSJJAG00000010882	Spen	92	66.531	Jaculus_jaculus
ENSGMOG00000008397	-	98	88.827	ENSKMAG00000003882	-	97	86.957	Kryptolebias_marmoratus
ENSGMOG00000008397	-	88	79.769	ENSKMAG00000021725	si:ch1073-335m2.2	72	73.096	Kryptolebias_marmoratus
ENSGMOG00000008397	-	80	81.325	ENSLBEG00000020855	si:ch1073-335m2.2	71	81.325	Labrus_bergylta
ENSGMOG00000008397	-	85	56.758	ENSLBEG00000019129	-	100	56.758	Labrus_bergylta
ENSGMOG00000008397	-	97	84.472	ENSLACG00000003258	SPEN	99	84.472	Latimeria_chalumnae
ENSGMOG00000008397	-	97	84.138	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.138	Lepisosteus_oculatus
ENSGMOG00000008397	-	84	65.217	ENSLAFG00000004524	SPEN	83	65.217	Loxodonta_africana
ENSGMOG00000008397	-	83	76.617	ENSMFAG00000041974	SPEN	78	76.617	Macaca_fascicularis
ENSGMOG00000008397	-	83	76.617	ENSMMUG00000008026	SPEN	78	76.617	Macaca_mulatta
ENSGMOG00000008397	-	83	76.617	ENSMNEG00000042402	SPEN	78	76.617	Macaca_nemestrina
ENSGMOG00000008397	-	83	76.617	ENSMLEG00000039293	SPEN	78	76.617	Mandrillus_leucophaeus
ENSGMOG00000008397	-	88	79.769	ENSMAMG00000023870	si:ch1073-335m2.2	73	72.277	Mastacembelus_armatus
ENSGMOG00000008397	-	90	59.411	ENSMZEG00005021491	-	99	59.536	Maylandia_zebra
ENSGMOG00000008397	-	66	79.769	ENSMZEG00005011762	si:ch1073-335m2.2	72	67.265	Maylandia_zebra
ENSGMOG00000008397	-	65	67.611	ENSMAUG00000008318	Spen	65	67.611	Mesocricetus_auratus
ENSGMOG00000008397	-	98	65.737	ENSMICG00000030994	SPEN	83	66.535	Microcebus_murinus
ENSGMOG00000008397	-	65	69.198	ENSMOCG00000016083	Spen	63	69.198	Microtus_ochrogaster
ENSGMOG00000008397	-	94	51.777	ENSMODG00000003411	SPEN	94	52.666	Monodelphis_domestica
ENSGMOG00000008397	-	98	92.737	ENSMALG00000008625	-	97	91.304	Monopterus_albus
ENSGMOG00000008397	-	64	76.119	MGP_CAROLIEiJ_G0026745	Spen	65	76.119	Mus_caroli
ENSGMOG00000008397	-	64	77.114	ENSMUSG00000040761	Spen	65	77.114	Mus_musculus
ENSGMOG00000008397	-	70	61.455	MGP_PahariEiJ_G0029076	Spen	67	60.791	Mus_pahari
ENSGMOG00000008397	-	68	77.114	MGP_SPRETEiJ_G0027724	Spen	65	77.114	Mus_spretus
ENSGMOG00000008397	-	62	76.923	ENSMPUG00000016317	SPEN	79	67.755	Mustela_putorius_furo
ENSGMOG00000008397	-	60	86.022	ENSMLUG00000010144	SPEN	99	71.375	Myotis_lucifugus
ENSGMOG00000008397	-	68	65.863	ENSNGAG00000000641	Spen	70	65.863	Nannospalax_galili
ENSGMOG00000008397	-	85	57.694	ENSNBRG00000022090	-	100	57.957	Neolamprologus_brichardi
ENSGMOG00000008397	-	91	79.191	ENSNBRG00000005733	si:ch1073-335m2.2	100	67.265	Neolamprologus_brichardi
ENSGMOG00000008397	-	93	76.119	ENSNLEG00000007652	SPEN	78	76.119	Nomascus_leucogenys
ENSGMOG00000008397	-	68	82.292	ENSMEUG00000002422	SPEN	90	82.292	Notamacropus_eugenii
ENSGMOG00000008397	-	60	76.821	ENSOPRG00000015800	SPEN	66	64.134	Ochotona_princeps
ENSGMOG00000008397	-	80	79.888	ENSODEG00000016644	SPEN	96	79.888	Octodon_degus
ENSGMOG00000008397	-	98	88.525	ENSONIG00000006573	-	99	79.855	Oreochromis_niloticus
ENSGMOG00000008397	-	66	60.819	ENSOCUG00000010840	SPEN	69	50.421	Oryctolagus_cuniculus
ENSGMOG00000008397	-	88	52.798	ENSORLG00000028894	-	100	52.960	Oryzias_latipes
ENSGMOG00000008397	-	88	53.079	ENSORLG00020007735	-	100	53.273	Oryzias_latipes_hni
ENSGMOG00000008397	-	98	86.592	ENSORLG00015022085	-	98	84.783	Oryzias_latipes_hsok
ENSGMOG00000008397	-	98	86.413	ENSOMEG00000007639	-	98	86.413	Oryzias_melastigma
ENSGMOG00000008397	-	66	81.065	ENSOMEG00000004509	si:ch1073-335m2.2	71	81.065	Oryzias_melastigma
ENSGMOG00000008397	-	66	77.320	ENSOGAG00000025110	SPEN	86	67.470	Otolemur_garnettii
ENSGMOG00000008397	-	95	66.667	ENSOARG00000008477	SPEN	80	66.667	Ovis_aries
ENSGMOG00000008397	-	88	65.726	ENSPPAG00000035690	SPEN	80	65.726	Pan_paniscus
ENSGMOG00000008397	-	88	65.726	ENSPTRG00000000210	SPEN	80	65.726	Pan_troglodytes
ENSGMOG00000008397	-	83	76.617	ENSPANG00000006293	SPEN	78	76.617	Papio_anubis
ENSGMOG00000008397	-	95	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	97	100.000	Paramormyrops_kingsleyae
ENSGMOG00000008397	-	99	82.258	ENSPKIG00000002617	SPEN	98	82.258	Paramormyrops_kingsleyae
ENSGMOG00000008397	-	93	51.954	ENSPSIG00000008026	SPEN	100	42.915	Pelodiscus_sinensis
ENSGMOG00000008397	-	65	65.600	ENSPEMG00000022997	Spen	63	65.600	Peromyscus_maniculatus_bairdii
ENSGMOG00000008397	-	99	89.011	ENSPMEG00000006764	-	97	88.587	Poecilia_mexicana
ENSGMOG00000008397	-	99	89.560	ENSPREG00000010399	-	97	89.130	Poecilia_reticulata
ENSGMOG00000008397	-	89	65.726	ENSPPYG00000001834	SPEN	79	76.119	Pongo_abelii
ENSGMOG00000008397	-	85	74.627	ENSPCAG00000009543	SPEN	73	74.627	Procavia_capensis
ENSGMOG00000008397	-	94	79.330	ENSPCOG00000021735	SPEN	80	63.386	Propithecus_coquereli
ENSGMOG00000008397	-	68	75.124	ENSPVAG00000013794	SPEN	65	65.217	Pteropus_vampyrus
ENSGMOG00000008397	-	98	89.385	ENSPNYG00000012379	-	97	88.043	Pundamilia_nyererei
ENSGMOG00000008397	-	91	79.769	ENSPNYG00000009042	si:ch1073-335m2.2	100	67.265	Pundamilia_nyererei
ENSGMOG00000008397	-	96	85.876	ENSPNAG00000020795	spen	97	83.696	Pygocentrus_nattereri
ENSGMOG00000008397	-	65	62.454	ENSRNOG00000033556	Spen	91	62.454	Rattus_norvegicus
ENSGMOG00000008397	-	83	76.617	ENSRBIG00000039654	SPEN	79	76.617	Rhinopithecus_bieti
ENSGMOG00000008397	-	82	76.617	ENSRROG00000035686	SPEN	78	76.617	Rhinopithecus_roxellana
ENSGMOG00000008397	-	84	66.932	ENSSBOG00000028770	SPEN	82	66.932	Saimiri_boliviensis_boliviensis
ENSGMOG00000008397	-	74	51.946	ENSSHAG00000004960	SPEN	90	81.250	Sarcophilus_harrisii
ENSGMOG00000008397	-	87	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	100	49.249	Scleropages_formosus
ENSGMOG00000008397	-	99	87.151	ENSSFOG00015010267	si:ch1073-335m2.2	98	84.574	Scleropages_formosus
ENSGMOG00000008397	-	68	79.191	ENSSMAG00000000125	si:ch1073-335m2.2	72	67.265	Scophthalmus_maximus
ENSGMOG00000008397	-	98	91.620	ENSSMAG00000008996	-	97	90.217	Scophthalmus_maximus
ENSGMOG00000008397	-	89	79.769	ENSSDUG00000008416	si:ch1073-335m2.2	92	68.161	Seriola_dumerili
ENSGMOG00000008397	-	98	92.179	ENSSDUG00000003476	-	97	90.761	Seriola_dumerili
ENSGMOG00000008397	-	98	92.179	ENSSLDG00000012950	-	97	90.761	Seriola_lalandi_dorsalis
ENSGMOG00000008397	-	73	79.769	ENSSLDG00000023347	si:ch1073-335m2.2	75	68.161	Seriola_lalandi_dorsalis
ENSGMOG00000008397	-	82	41.633	ENSSPUG00000001866	-	92	42.199	Sphenodon_punctatus
ENSGMOG00000008397	-	98	91.061	ENSSPAG00000006014	-	97	89.674	Stegastes_partitus
ENSGMOG00000008397	-	87	79.191	ENSSPAG00000012454	si:ch1073-335m2.2	91	78.453	Stegastes_partitus
ENSGMOG00000008397	-	85	43.269	ENSSSCG00000034484	SPEN	83	47.108	Sus_scrofa
ENSGMOG00000008397	-	98	93.855	ENSTRUG00000024350	-	97	91.848	Takifugu_rubripes
ENSGMOG00000008397	-	95	91.713	ENSTNIG00000010907	-	99	80.145	Tetraodon_nigroviridis
ENSGMOG00000008397	-	93	79.191	ENSTNIG00000014666	si:ch1073-335m2.2	73	71.144	Tetraodon_nigroviridis
ENSGMOG00000008397	-	60	77.436	ENSTBEG00000003628	SPEN	67	77.436	Tupaia_belangeri
ENSGMOG00000008397	-	72	75.362	ENSTTRG00000015704	SPEN	68	75.362	Tursiops_truncatus
ENSGMOG00000008397	-	64	77.949	ENSUAMG00000009600	SPEN	83	67.470	Ursus_americanus
ENSGMOG00000008397	-	82	77.949	ENSUMAG00000021641	SPEN	83	67.470	Ursus_maritimus
ENSGMOG00000008397	-	56	100.000	ENSVVUG00000028951	SPEN	59	100.000	Vulpes_vulpes
ENSGMOG00000008397	-	75	43.923	ENSXETG00000023114	SPEN	93	39.730	Xenopus_tropicalis
ENSGMOG00000008397	-	99	89.560	ENSXMAG00000021384	-	97	89.130	Xiphophorus_maculatus