EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008438 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 11941 bases
Position: chrGeneScaffold_4376:6201-18141
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000009032	RRM_1	PF00076.22	3.6e-06	1	1
ENSGMOP00000009032	G-patch	PF01585.23	6.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009279	-	1242	-	ENSGMOP00000009032	414 (aa)	-	UPI00023F139C

Gene Model

Click here to download ENSGMOG00000008438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008438	rbm17	100	75.297	ENSG00000134453	RBM17	99	75.297	Homo_sapiens
ENSGMOG00000008438	rbm17	99	82.933	ENSAPOG00000007101	rbm17	99	82.933	Acanthochromis_polyacanthus
ENSGMOG00000008438	rbm17	100	75.534	ENSAMEG00000002107	RBM17	99	75.534	Ailuropoda_melanoleuca
ENSGMOG00000008438	rbm17	100	79.236	ENSACIG00000006251	rbm17	99	79.236	Amphilophus_citrinellus
ENSGMOG00000008438	rbm17	100	83.014	ENSAOCG00000014892	rbm17	99	83.014	Amphiprion_ocellaris
ENSGMOG00000008438	rbm17	100	83.014	ENSAPEG00000022779	rbm17	99	83.014	Amphiprion_percula
ENSGMOG00000008438	rbm17	100	82.857	ENSATEG00000004406	rbm17	99	82.857	Anabas_testudineus
ENSGMOG00000008438	rbm17	100	76.010	ENSAPLG00000004190	RBM17	99	76.010	Anas_platyrhynchos
ENSGMOG00000008438	rbm17	90	72.938	ENSACAG00000005418	RBM17	99	72.938	Anolis_carolinensis
ENSGMOG00000008438	rbm17	100	75.772	ENSANAG00000030127	RBM17	92	83.333	Aotus_nancymaae
ENSGMOG00000008438	rbm17	100	64.929	ENSANAG00000019330	-	93	78.947	Aotus_nancymaae
ENSGMOG00000008438	rbm17	100	79.036	ENSACLG00000003928	rbm17	99	79.036	Astatotilapia_calliptera
ENSGMOG00000008438	rbm17	100	78.282	ENSAMXG00000005853	rbm17	99	78.520	Astyanax_mexicanus
ENSGMOG00000008438	rbm17	100	75.297	ENSBTAG00000021951	RBM17	99	75.297	Bos_taurus
ENSGMOG00000008438	rbm17	100	74.109	ENSBTAG00000011094	-	99	74.109	Bos_taurus
ENSGMOG00000008438	rbm17	100	75.772	ENSCJAG00000020573	RBM17	99	75.772	Callithrix_jacchus
ENSGMOG00000008438	rbm17	100	75.534	ENSCAFG00000005206	RBM17	99	75.534	Canis_familiaris
ENSGMOG00000008438	rbm17	100	72.356	ENSCAFG00020005420	RBM17	99	73.798	Canis_lupus_dingo
ENSGMOG00000008438	rbm17	100	75.297	ENSCHIG00000023204	-	99	75.297	Capra_hircus
ENSGMOG00000008438	rbm17	100	73.397	ENSCHIG00000019921	-	99	73.397	Capra_hircus
ENSGMOG00000008438	rbm17	100	75.772	ENSTSYG00000001165	RBM17	97	82.609	Carlito_syrichta
ENSGMOG00000008438	rbm17	96	58.955	ENSCAPG00000006275	RBM17	99	64.456	Cavia_aperea
ENSGMOG00000008438	rbm17	100	72.422	ENSCPOG00000005679	RBM17	99	74.038	Cavia_porcellus
ENSGMOG00000008438	rbm17	100	75.772	ENSCCAG00000018655	RBM17	92	83.333	Cebus_capucinus
ENSGMOG00000008438	rbm17	100	75.297	ENSCATG00000041566	RBM17	92	83.333	Cercocebus_atys
ENSGMOG00000008438	rbm17	100	75.772	ENSCLAG00000012195	RBM17	99	75.772	Chinchilla_lanigera
ENSGMOG00000008438	rbm17	100	75.297	ENSCSAG00000013564	RBM17	99	75.297	Chlorocebus_sabaeus
ENSGMOG00000008438	rbm17	93	59.694	ENSCHOG00000005131	RBM17	100	59.694	Choloepus_hoffmanni
ENSGMOG00000008438	rbm17	100	76.010	ENSCPBG00000019836	RBM17	99	76.010	Chrysemys_picta_bellii
ENSGMOG00000008438	rbm17	100	44.048	ENSCSAVG00000008782	-	99	44.048	Ciona_savignyi
ENSGMOG00000008438	rbm17	100	75.059	ENSCANG00000030987	RBM17	92	83.333	Colobus_angolensis_palliatus
ENSGMOG00000008438	rbm17	98	67.822	ENSCANG00000023715	-	99	67.822	Colobus_angolensis_palliatus
ENSGMOG00000008438	rbm17	100	60.386	ENSCGRG00001009256	-	99	59.903	Cricetulus_griseus_chok1gshd
ENSGMOG00000008438	rbm17	100	75.772	ENSCGRG00001013842	Rbm17	99	75.772	Cricetulus_griseus_chok1gshd
ENSGMOG00000008438	rbm17	100	75.772	ENSCGRG00000006907	Rbm17	99	75.772	Cricetulus_griseus_crigri
ENSGMOG00000008438	rbm17	100	78.520	ENSCSEG00000018164	rbm17	99	78.520	Cynoglossus_semilaevis
ENSGMOG00000008438	rbm17	100	77.108	ENSCVAG00000002476	rbm17	99	76.867	Cyprinodon_variegatus
ENSGMOG00000008438	rbm17	100	75.359	ENSDARG00000031346	rbm17	99	77.088	Danio_rerio
ENSGMOG00000008438	rbm17	100	75.297	ENSDNOG00000035920	RBM17	99	75.297	Dasypus_novemcinctus
ENSGMOG00000008438	rbm17	99	34.573	FBgn0086683	Spf45	99	34.735	Drosophila_melanogaster
ENSGMOG00000008438	rbm17	100	60.096	ENSETEG00000006642	RBM17	99	60.096	Echinops_telfairi
ENSGMOG00000008438	rbm17	63	66.667	ENSEBUG00000010253	rbm17	83	66.667	Eptatretus_burgeri
ENSGMOG00000008438	rbm17	93	72.308	ENSEASG00005009236	-	99	72.308	Equus_asinus_asinus
ENSGMOG00000008438	rbm17	100	71.875	ENSEASG00005019205	-	99	73.558	Equus_asinus_asinus
ENSGMOG00000008438	rbm17	100	64.904	ENSECAG00000008939	RBM17	99	66.827	Equus_caballus
ENSGMOG00000008438	rbm17	100	66.508	ENSECAG00000001379	-	99	66.508	Equus_caballus
ENSGMOG00000008438	rbm17	86	65.027	ENSEEUG00000013077	RBM17	100	65.027	Erinaceus_europaeus
ENSGMOG00000008438	rbm17	100	80.562	ENSELUG00000006440	rbm17	99	80.562	Esox_lucius
ENSGMOG00000008438	rbm17	100	75.534	ENSFCAG00000031988	RBM17	99	75.534	Felis_catus
ENSGMOG00000008438	rbm17	100	75.059	ENSFALG00000001790	RBM17	99	75.059	Ficedula_albicollis
ENSGMOG00000008438	rbm17	100	75.772	ENSFDAG00000007470	RBM17	99	75.772	Fukomys_damarensis
ENSGMOG00000008438	rbm17	100	79.048	ENSFHEG00000001266	rbm17	99	78.923	Fundulus_heteroclitus
ENSGMOG00000008438	rbm17	100	76.010	ENSGALG00000006332	RBM17	99	76.010	Gallus_gallus
ENSGMOG00000008438	rbm17	100	78.947	ENSGAFG00000019879	rbm17	99	80.144	Gambusia_affinis
ENSGMOG00000008438	rbm17	100	82.254	ENSGACG00000019174	rbm17	99	82.254	Gasterosteus_aculeatus
ENSGMOG00000008438	rbm17	100	76.010	ENSGAGG00000019906	RBM17	99	76.010	Gopherus_agassizii
ENSGMOG00000008438	rbm17	100	82.734	ENSHBUG00000016624	rbm17	99	82.734	Haplochromis_burtoni
ENSGMOG00000008438	rbm17	100	75.772	ENSHGLG00000011580	RBM17	99	75.772	Heterocephalus_glaber_female
ENSGMOG00000008438	rbm17	100	75.772	ENSHGLG00100010460	RBM17	99	75.772	Heterocephalus_glaber_male
ENSGMOG00000008438	rbm17	100	62.802	ENSHGLG00100010556	-	99	62.802	Heterocephalus_glaber_male
ENSGMOG00000008438	rbm17	100	81.340	ENSHCOG00000010865	rbm17	100	81.340	Hippocampus_comes
ENSGMOG00000008438	rbm17	100	73.810	ENSIPUG00000007699	Rbm17	99	78.385	Ictalurus_punctatus
ENSGMOG00000008438	rbm17	100	75.772	ENSSTOG00000013591	RBM17	99	75.772	Ictidomys_tridecemlineatus
ENSGMOG00000008438	rbm17	100	57.007	ENSJJAG00000000993	-	99	55.582	Jaculus_jaculus
ENSGMOG00000008438	rbm17	100	75.772	ENSJJAG00000022886	Rbm17	99	75.772	Jaculus_jaculus
ENSGMOG00000008438	rbm17	100	78.520	ENSKMAG00000021400	rbm17	99	79.714	Kryptolebias_marmoratus
ENSGMOG00000008438	rbm17	100	82.381	ENSLBEG00000000881	rbm17	99	82.381	Labrus_bergylta
ENSGMOG00000008438	rbm17	100	61.737	ENSLACG00000017297	RBM17	99	61.737	Latimeria_chalumnae
ENSGMOG00000008438	rbm17	100	77.725	ENSLOCG00000015659	rbm17	99	77.725	Lepisosteus_oculatus
ENSGMOG00000008438	rbm17	100	75.297	ENSLAFG00000011629	RBM17	99	75.297	Loxodonta_africana
ENSGMOG00000008438	rbm17	100	75.297	ENSMFAG00000035521	RBM17	92	83.333	Macaca_fascicularis
ENSGMOG00000008438	rbm17	100	75.297	ENSMMUG00000015152	RBM17	92	83.333	Macaca_mulatta
ENSGMOG00000008438	rbm17	100	75.297	ENSMNEG00000017264	RBM17	92	83.333	Macaca_nemestrina
ENSGMOG00000008438	rbm17	100	75.297	ENSMLEG00000029340	RBM17	92	83.333	Mandrillus_leucophaeus
ENSGMOG00000008438	rbm17	100	80.952	ENSMAMG00000000387	rbm17	99	81.190	Mastacembelus_armatus
ENSGMOG00000008438	rbm17	100	82.734	ENSMZEG00005015179	rbm17	99	82.734	Maylandia_zebra
ENSGMOG00000008438	rbm17	100	75.650	ENSMGAG00000003981	RBM17	99	75.650	Meleagris_gallopavo
ENSGMOG00000008438	rbm17	100	75.772	ENSMAUG00000019247	Rbm17	99	75.772	Mesocricetus_auratus
ENSGMOG00000008438	rbm17	100	75.772	ENSMICG00000003976	-	99	75.772	Microcebus_murinus
ENSGMOG00000008438	rbm17	100	71.090	ENSMICG00000041489	-	99	71.090	Microcebus_murinus
ENSGMOG00000008438	rbm17	93	61.578	ENSMOCG00000014517	-	99	61.832	Microtus_ochrogaster
ENSGMOG00000008438	rbm17	100	75.772	ENSMOCG00000011847	Rbm17	99	75.772	Microtus_ochrogaster
ENSGMOG00000008438	rbm17	100	76.596	ENSMMOG00000010264	rbm17	99	76.596	Mola_mola
ENSGMOG00000008438	rbm17	100	75.059	ENSMODG00000016648	RBM17	99	75.059	Monodelphis_domestica
ENSGMOG00000008438	rbm17	100	80.523	ENSMALG00000010597	rbm17	99	81.473	Monopterus_albus
ENSGMOG00000008438	rbm17	100	75.772	MGP_CAROLIEiJ_G0023173	Rbm17	99	75.772	Mus_caroli
ENSGMOG00000008438	rbm17	100	75.772	ENSMUSG00000037197	Rbm17	99	75.772	Mus_musculus
ENSGMOG00000008438	rbm17	100	76.247	MGP_PahariEiJ_G0019233	Rbm17	99	76.247	Mus_pahari
ENSGMOG00000008438	rbm17	100	75.772	MGP_SPRETEiJ_G0024091	Rbm17	99	75.772	Mus_spretus
ENSGMOG00000008438	rbm17	87	73.224	ENSMPUG00000016359	RBM17	96	73.224	Mustela_putorius_furo
ENSGMOG00000008438	rbm17	100	72.684	ENSMLUG00000025709	-	99	72.684	Myotis_lucifugus
ENSGMOG00000008438	rbm17	100	74.171	ENSMLUG00000002302	-	99	74.171	Myotis_lucifugus
ENSGMOG00000008438	rbm17	100	52.969	ENSNGAG00000000663	-	99	51.781	Nannospalax_galili
ENSGMOG00000008438	rbm17	100	75.772	ENSNGAG00000000741	Rbm17	99	75.772	Nannospalax_galili
ENSGMOG00000008438	rbm17	100	76.627	ENSNBRG00000018148	rbm17	99	76.627	Neolamprologus_brichardi
ENSGMOG00000008438	rbm17	100	75.297	ENSNLEG00000033350	RBM17	92	83.333	Nomascus_leucogenys
ENSGMOG00000008438	rbm17	100	69.834	ENSMEUG00000011347	RBM17	99	69.834	Notamacropus_eugenii
ENSGMOG00000008438	rbm17	100	65.558	ENSOPRG00000002993	RBM17	99	65.558	Ochotona_princeps
ENSGMOG00000008438	rbm17	100	75.592	ENSODEG00000004393	RBM17	99	75.592	Octodon_degus
ENSGMOG00000008438	rbm17	97	58.955	ENSODEG00000007286	-	99	59.204	Octodon_degus
ENSGMOG00000008438	rbm17	100	82.974	ENSONIG00000011838	rbm17	99	82.974	Oreochromis_niloticus
ENSGMOG00000008438	rbm17	100	74.822	ENSOANG00000015455	RBM17	99	75.059	Ornithorhynchus_anatinus
ENSGMOG00000008438	rbm17	100	80.952	ENSORLG00000028798	rbm17	99	80.952	Oryzias_latipes
ENSGMOG00000008438	rbm17	100	81.190	ENSORLG00020004593	rbm17	98	81.190	Oryzias_latipes_hni
ENSGMOG00000008438	rbm17	100	81.340	ENSORLG00015000033	rbm17	99	81.340	Oryzias_latipes_hsok
ENSGMOG00000008438	rbm17	100	81.190	ENSOMEG00000012060	rbm17	99	81.190	Oryzias_melastigma
ENSGMOG00000008438	rbm17	100	76.010	ENSOGAG00000015687	RBM17	99	76.010	Otolemur_garnettii
ENSGMOG00000008438	rbm17	100	75.297	ENSOARG00000012975	RBM17	99	75.297	Ovis_aries
ENSGMOG00000008438	rbm17	100	75.297	ENSPPAG00000032347	RBM17	92	83.333	Pan_paniscus
ENSGMOG00000008438	rbm17	100	75.534	ENSPPRG00000010706	RBM17	99	75.534	Panthera_pardus
ENSGMOG00000008438	rbm17	100	75.534	ENSPTIG00000007596	RBM17	99	75.534	Panthera_tigris_altaica
ENSGMOG00000008438	rbm17	100	75.297	ENSPTRG00000002265	RBM17	92	83.333	Pan_troglodytes
ENSGMOG00000008438	rbm17	100	75.297	ENSPANG00000023425	RBM17	92	83.333	Papio_anubis
ENSGMOG00000008438	rbm17	100	73.068	ENSPKIG00000005048	-	99	73.536	Paramormyrops_kingsleyae
ENSGMOG00000008438	rbm17	100	76.471	ENSPKIG00000025526	rbm17	99	76.056	Paramormyrops_kingsleyae
ENSGMOG00000008438	rbm17	100	74.764	ENSPSIG00000012332	RBM17	99	74.764	Pelodiscus_sinensis
ENSGMOG00000008438	rbm17	100	75.952	ENSPMGG00000007980	rbm17	99	75.952	Periophthalmus_magnuspinnatus
ENSGMOG00000008438	rbm17	100	75.772	ENSPEMG00000014320	Rbm17	99	75.772	Peromyscus_maniculatus_bairdii
ENSGMOG00000008438	rbm17	100	74.704	ENSPCIG00000019260	-	99	74.704	Phascolarctos_cinereus
ENSGMOG00000008438	rbm17	100	79.048	ENSPFOG00000013271	rbm17	99	80.238	Poecilia_formosa
ENSGMOG00000008438	rbm17	100	78.571	ENSPLAG00000004455	rbm17	99	79.762	Poecilia_latipinna
ENSGMOG00000008438	rbm17	100	79.187	ENSPMEG00000014864	rbm17	99	80.383	Poecilia_mexicana
ENSGMOG00000008438	rbm17	100	79.665	ENSPREG00000015589	rbm17	99	80.861	Poecilia_reticulata
ENSGMOG00000008438	rbm17	82	52.754	ENSPPYG00000019042	-	100	52.754	Pongo_abelii
ENSGMOG00000008438	rbm17	100	56.057	ENSPPYG00000019881	-	100	56.057	Pongo_abelii
ENSGMOG00000008438	rbm17	100	75.297	ENSPPYG00000002067	RBM17	99	75.297	Pongo_abelii
ENSGMOG00000008438	rbm17	100	68.409	ENSPCAG00000016879	RBM17	99	68.409	Procavia_capensis
ENSGMOG00000008438	rbm17	100	75.772	ENSPCOG00000027881	RBM17	99	75.772	Propithecus_coquereli
ENSGMOG00000008438	rbm17	100	67.458	ENSPVAG00000015499	RBM17	99	67.458	Pteropus_vampyrus
ENSGMOG00000008438	rbm17	100	72.530	ENSPNYG00000015274	rbm17	99	70.120	Pundamilia_nyererei
ENSGMOG00000008438	rbm17	100	78.043	ENSPNAG00000030046	rbm17	99	78.759	Pygocentrus_nattereri
ENSGMOG00000008438	rbm17	100	75.772	ENSRNOG00000018767	Rbm17	99	75.772	Rattus_norvegicus
ENSGMOG00000008438	rbm17	100	75.297	ENSRBIG00000043727	RBM17	92	83.333	Rhinopithecus_bieti
ENSGMOG00000008438	rbm17	100	75.297	ENSRROG00000044142	RBM17	92	83.333	Rhinopithecus_roxellana
ENSGMOG00000008438	rbm17	100	75.534	ENSSBOG00000031661	-	99	75.534	Saimiri_boliviensis_boliviensis
ENSGMOG00000008438	rbm17	100	67.933	ENSSBOG00000023653	-	99	67.933	Saimiri_boliviensis_boliviensis
ENSGMOG00000008438	rbm17	100	75.059	ENSSHAG00000012480	-	99	75.059	Sarcophilus_harrisii
ENSGMOG00000008438	rbm17	100	75.650	ENSSFOG00015009892	rbm17	99	76.123	Scleropages_formosus
ENSGMOG00000008438	rbm17	100	80.742	ENSSMAG00000012368	rbm17	99	80.742	Scophthalmus_maximus
ENSGMOG00000008438	rbm17	100	79.812	ENSSDUG00000015015	rbm17	99	80.986	Seriola_dumerili
ENSGMOG00000008438	rbm17	100	79.812	ENSSLDG00000014486	rbm17	99	80.986	Seriola_lalandi_dorsalis
ENSGMOG00000008438	rbm17	50	71.171	ENSSARG00000001792	-	79	71.171	Sorex_araneus
ENSGMOG00000008438	rbm17	100	76.485	ENSSPUG00000001036	RBM17	99	76.485	Sphenodon_punctatus
ENSGMOG00000008438	rbm17	100	82.297	ENSSPAG00000002338	rbm17	99	82.297	Stegastes_partitus
ENSGMOG00000008438	rbm17	100	75.059	ENSSSCG00000011134	RBM17	99	75.059	Sus_scrofa
ENSGMOG00000008438	rbm17	100	75.297	ENSTGUG00000002013	RBM17	99	75.297	Taeniopygia_guttata
ENSGMOG00000008438	rbm17	100	81.623	ENSTRUG00000010698	rbm17	99	81.623	Takifugu_rubripes
ENSGMOG00000008438	rbm17	100	81.818	ENSTNIG00000006892	rbm17	99	81.818	Tetraodon_nigroviridis
ENSGMOG00000008438	rbm17	85	90.323	ENSTBEG00000014686	RBM17	84	90.323	Tupaia_belangeri
ENSGMOG00000008438	rbm17	90	73.947	ENSTTRG00000001344	RBM17	99	73.947	Tursiops_truncatus
ENSGMOG00000008438	rbm17	100	72.596	ENSUAMG00000009499	RBM17	99	74.038	Ursus_americanus
ENSGMOG00000008438	rbm17	100	75.534	ENSUMAG00000012237	RBM17	99	75.534	Ursus_maritimus
ENSGMOG00000008438	rbm17	100	69.834	ENSVPAG00000005497	RBM17	99	69.834	Vicugna_pacos
ENSGMOG00000008438	rbm17	100	72.356	ENSVVUG00000006780	RBM17	99	73.798	Vulpes_vulpes
ENSGMOG00000008438	rbm17	100	73.571	ENSXETG00000018123	rbm17	100	73.571	Xenopus_tropicalis
ENSGMOG00000008438	rbm17	100	79.808	ENSXMAG00000008674	rbm17	99	81.010	Xiphophorus_maculatus