EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000008558 (Gene tree)
Gene ID: -
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger%2C matrin-type 3
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 4985 bases
Position: chrGeneScaffold_1321:215211-220195
Accession: ZDB-GENE-130530-881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000009155	zf-met	PF12874.7	1e-18	1	3
ENSGMOP00000009155	zf-met	PF12874.7	1e-18	2	3
ENSGMOP00000009155	zf-met	PF12874.7	1e-18	3	3
ENSGMOP00000009155	zf-C2H2_jaz	PF12171.8	4.5e-18	1	3
ENSGMOP00000009155	zf-C2H2_jaz	PF12171.8	4.5e-18	2	3
ENSGMOP00000009155	zf-C2H2_jaz	PF12171.8	4.5e-18	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009404	-	723	-	ENSGMOP00000009155	240 (aa)	-	UPI00023F16FF

Gene Model

Click here to download ENSGMOG00000008558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000008558	zmat3	60	39.252	ENSGMOG00000010508	zgc:171482	80	39.252
ENSGMOG00000008558	zmat3	92	33.077	ENSGMOG00000007950	zmat4a	73	33.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008558	zmat3	95	69.099	ENSG00000172667	ZMAT3	79	69.099	Homo_sapiens
ENSGMOG00000008558	zmat3	100	77.366	ENSAPOG00000015037	zmat3	86	77.366	Acanthochromis_polyacanthus
ENSGMOG00000008558	zmat3	99	68.182	ENSAMEG00000010742	ZMAT3	83	68.182	Ailuropoda_melanoleuca
ENSGMOG00000008558	zmat3	100	77.273	ENSACIG00000023037	zmat3	80	77.273	Amphilophus_citrinellus
ENSGMOG00000008558	zmat3	100	76.955	ENSAOCG00000017955	zmat3	82	76.955	Amphiprion_ocellaris
ENSGMOG00000008558	zmat3	100	76.955	ENSAPEG00000014553	zmat3	85	76.955	Amphiprion_percula
ENSGMOG00000008558	zmat3	100	76.446	ENSATEG00000022244	zmat3	88	76.446	Anabas_testudineus
ENSGMOG00000008558	zmat3	98	69.397	ENSAPLG00000013292	ZMAT3	87	69.397	Anas_platyrhynchos
ENSGMOG00000008558	zmat3	97	67.949	ENSACAG00000005005	ZMAT3	80	67.949	Anolis_carolinensis
ENSGMOG00000008558	zmat3	89	66.514	ENSANAG00000035673	ZMAT3	76	67.431	Aotus_nancymaae
ENSGMOG00000008558	zmat3	100	76.860	ENSACLG00000026272	zmat3	84	76.860	Astatotilapia_calliptera
ENSGMOG00000008558	zmat3	96	71.667	ENSAMXG00000009798	zmat3	66	71.667	Astyanax_mexicanus
ENSGMOG00000008558	zmat3	99	68.033	ENSBTAG00000012463	ZMAT3	83	68.465	Bos_taurus
ENSGMOG00000008558	zmat3	95	68.261	ENSCJAG00000013399	ZMAT3	79	68.670	Callithrix_jacchus
ENSGMOG00000008558	zmat3	99	66.803	ENSCAFG00000011081	ZMAT3	83	68.050	Canis_familiaris
ENSGMOG00000008558	zmat3	99	66.803	ENSCAFG00020023107	ZMAT3	83	68.050	Canis_lupus_dingo
ENSGMOG00000008558	zmat3	99	67.917	ENSCHIG00000025074	ZMAT3	83	67.917	Capra_hircus
ENSGMOG00000008558	zmat3	95	68.534	ENSTSYG00000026546	ZMAT3	79	68.966	Carlito_syrichta
ENSGMOG00000008558	zmat3	95	69.565	ENSCAPG00000014645	ZMAT3	79	69.565	Cavia_aperea
ENSGMOG00000008558	zmat3	95	69.565	ENSCPOG00000003865	ZMAT3	79	69.565	Cavia_porcellus
ENSGMOG00000008558	zmat3	95	67.686	ENSCCAG00000036721	ZMAT3	79	68.534	Cebus_capucinus
ENSGMOG00000008558	zmat3	96	62.338	ENSCATG00000025137	ZMAT3	77	62.338	Cercocebus_atys
ENSGMOG00000008558	zmat3	95	70.000	ENSCLAG00000013464	ZMAT3	79	70.000	Chinchilla_lanigera
ENSGMOG00000008558	zmat3	95	68.534	ENSCSAG00000012935	ZMAT3	79	68.534	Chlorocebus_sabaeus
ENSGMOG00000008558	zmat3	95	70.690	ENSCHOG00000005591	ZMAT3	79	70.690	Choloepus_hoffmanni
ENSGMOG00000008558	zmat3	98	67.094	ENSCPBG00000026917	ZMAT3	79	67.094	Chrysemys_picta_bellii
ENSGMOG00000008558	zmat3	95	68.670	ENSCANG00000029476	ZMAT3	79	68.670	Colobus_angolensis_palliatus
ENSGMOG00000008558	zmat3	96	67.234	ENSCGRG00001012339	Zmat3	80	67.234	Cricetulus_griseus_chok1gshd
ENSGMOG00000008558	zmat3	96	67.234	ENSCGRG00000011491	Zmat3	80	67.234	Cricetulus_griseus_crigri
ENSGMOG00000008558	zmat3	100	76.400	ENSCSEG00000019463	zmat3	75	77.632	Cynoglossus_semilaevis
ENSGMOG00000008558	zmat3	100	75.510	ENSCVAG00000011847	zmat3	84	75.510	Cyprinodon_variegatus
ENSGMOG00000008558	zmat3	100	71.888	ENSDARG00000080021	zmat3	80	71.888	Danio_rerio
ENSGMOG00000008558	zmat3	99	67.623	ENSDNOG00000012284	ZMAT3	83	67.623	Dasypus_novemcinctus
ENSGMOG00000008558	zmat3	99	67.901	ENSDORG00000011801	Zmat3	83	67.901	Dipodomys_ordii
ENSGMOG00000008558	zmat3	75	63.128	ENSETEG00000008883	ZMAT3	76	63.128	Echinops_telfairi
ENSGMOG00000008558	zmat3	99	67.901	ENSEASG00005016887	ZMAT3	83	67.901	Equus_asinus_asinus
ENSGMOG00000008558	zmat3	99	67.901	ENSECAG00000012784	ZMAT3	83	67.901	Equus_caballus
ENSGMOG00000008558	zmat3	98	62.445	ENSEEUG00000001126	ZMAT3	79	62.445	Erinaceus_europaeus
ENSGMOG00000008558	zmat3	100	72.581	ENSELUG00000010132	zmat3	66	72.581	Esox_lucius
ENSGMOG00000008558	zmat3	99	67.623	ENSFCAG00000014578	ZMAT3	83	67.623	Felis_catus
ENSGMOG00000008558	zmat3	98	68.220	ENSFALG00000008403	ZMAT3	80	68.220	Ficedula_albicollis
ENSGMOG00000008558	zmat3	95	70.130	ENSFDAG00000013376	ZMAT3	79	70.130	Fukomys_damarensis
ENSGMOG00000008558	zmat3	100	77.778	ENSFHEG00000003221	zmat3	87	78.601	Fundulus_heteroclitus
ENSGMOG00000008558	zmat3	98	68.966	ENSGALG00000040948	ZMAT3	90	68.966	Gallus_gallus
ENSGMOG00000008558	zmat3	66	77.215	ENSGAFG00000010485	zmat3	55	77.215	Gambusia_affinis
ENSGMOG00000008558	zmat3	100	77.366	ENSGACG00000006175	zmat3	93	77.366	Gasterosteus_aculeatus
ENSGMOG00000008558	zmat3	95	68.261	ENSGAGG00000009275	ZMAT3	79	68.261	Gopherus_agassizii
ENSGMOG00000008558	zmat3	95	68.966	ENSGGOG00000009975	ZMAT3	79	68.966	Gorilla_gorilla
ENSGMOG00000008558	zmat3	100	76.446	ENSHBUG00000004401	zmat3	84	76.446	Haplochromis_burtoni
ENSGMOG00000008558	zmat3	99	68.465	ENSHGLG00000011523	ZMAT3	83	68.465	Heterocephalus_glaber_female
ENSGMOG00000008558	zmat3	99	68.465	ENSHGLG00100012235	ZMAT3	83	68.465	Heterocephalus_glaber_male
ENSGMOG00000008558	zmat3	100	74.694	ENSHCOG00000010624	zmat3	72	74.694	Hippocampus_comes
ENSGMOG00000008558	zmat3	96	69.231	ENSIPUG00000003043	zmat3	84	69.231	Ictalurus_punctatus
ENSGMOG00000008558	zmat3	99	67.901	ENSSTOG00000028436	ZMAT3	83	68.313	Ictidomys_tridecemlineatus
ENSGMOG00000008558	zmat3	96	68.803	ENSJJAG00000004288	Zmat3	80	68.803	Jaculus_jaculus
ENSGMOG00000008558	zmat3	100	77.510	ENSKMAG00000008962	zmat3	89	77.917	Kryptolebias_marmoratus
ENSGMOG00000008558	zmat3	100	77.959	ENSLBEG00000001993	zmat3	87	77.959	Labrus_bergylta
ENSGMOG00000008558	zmat3	100	61.200	ENSLACG00000015780	ZMAT3	69	61.600	Latimeria_chalumnae
ENSGMOG00000008558	zmat3	100	70.281	ENSLOCG00000001108	zmat3	67	70.683	Lepisosteus_oculatus
ENSGMOG00000008558	zmat3	99	68.465	ENSLAFG00000000897	ZMAT3	83	68.465	Loxodonta_africana
ENSGMOG00000008558	zmat3	95	68.670	ENSMFAG00000021292	ZMAT3	79	68.670	Macaca_fascicularis
ENSGMOG00000008558	zmat3	95	68.670	ENSMMUG00000003216	ZMAT3	79	68.670	Macaca_mulatta
ENSGMOG00000008558	zmat3	95	68.670	ENSMNEG00000036725	ZMAT3	79	68.670	Macaca_nemestrina
ENSGMOG00000008558	zmat3	95	68.534	ENSMLEG00000026279	ZMAT3	79	68.534	Mandrillus_leucophaeus
ENSGMOG00000008558	zmat3	100	76.860	ENSMAMG00000012349	zmat3	78	76.860	Mastacembelus_armatus
ENSGMOG00000008558	zmat3	100	76.860	ENSMZEG00005015427	zmat3	82	76.860	Maylandia_zebra
ENSGMOG00000008558	zmat3	98	68.220	ENSMGAG00000009873	ZMAT3	80	68.220	Meleagris_gallopavo
ENSGMOG00000008558	zmat3	96	68.376	ENSMAUG00000001986	Zmat3	80	68.376	Mesocricetus_auratus
ENSGMOG00000008558	zmat3	99	68.033	ENSMICG00000049501	ZMAT3	83	68.033	Microcebus_murinus
ENSGMOG00000008558	zmat3	98	68.803	ENSMOCG00000018844	Zmat3	80	68.803	Microtus_ochrogaster
ENSGMOG00000008558	zmat3	100	76.033	ENSMMOG00000001603	zmat3	75	76.033	Mola_mola
ENSGMOG00000008558	zmat3	95	66.087	ENSMODG00000021308	ZMAT3	77	66.094	Monodelphis_domestica
ENSGMOG00000008558	zmat3	100	77.273	ENSMALG00000019683	zmat3	84	77.273	Monopterus_albus
ENSGMOG00000008558	zmat3	96	67.949	MGP_CAROLIEiJ_G0024914	Zmat3	80	67.949	Mus_caroli
ENSGMOG00000008558	zmat3	96	67.949	ENSMUSG00000027663	Zmat3	80	67.949	Mus_musculus
ENSGMOG00000008558	zmat3	96	67.382	MGP_PahariEiJ_G0026359	Zmat3	80	67.382	Mus_pahari
ENSGMOG00000008558	zmat3	96	67.949	MGP_SPRETEiJ_G0025848	Zmat3	80	67.949	Mus_spretus
ENSGMOG00000008558	zmat3	95	68.966	ENSMPUG00000017206	ZMAT3	79	68.966	Mustela_putorius_furo
ENSGMOG00000008558	zmat3	99	66.667	ENSMLUG00000013074	ZMAT3	82	66.667	Myotis_lucifugus
ENSGMOG00000008558	zmat3	96	69.231	ENSNGAG00000023602	Zmat3	80	69.231	Nannospalax_galili
ENSGMOG00000008558	zmat3	100	76.446	ENSNBRG00000020886	zmat3	84	76.446	Neolamprologus_brichardi
ENSGMOG00000008558	zmat3	95	69.099	ENSNLEG00000005658	ZMAT3	79	69.099	Nomascus_leucogenys
ENSGMOG00000008558	zmat3	99	66.805	ENSMEUG00000015724	ZMAT3	82	66.803	Notamacropus_eugenii
ENSGMOG00000008558	zmat3	95	68.534	ENSODEG00000003313	ZMAT3	79	68.966	Octodon_degus
ENSGMOG00000008558	zmat3	99	76.707	ENSONIG00000008388	zmat3	84	76.707	Oreochromis_niloticus
ENSGMOG00000008558	zmat3	92	63.226	ENSOANG00000009901	ZMAT3	67	63.226	Ornithorhynchus_anatinus
ENSGMOG00000008558	zmat3	99	67.500	ENSOCUG00000004658	ZMAT3	83	67.490	Oryctolagus_cuniculus
ENSGMOG00000008558	zmat3	100	76.000	ENSORLG00000011575	zmat3	51	76.000	Oryzias_latipes
ENSGMOG00000008558	zmat3	100	75.600	ENSORLG00020005858	zmat3	51	75.600	Oryzias_latipes_hni
ENSGMOG00000008558	zmat3	100	76.000	ENSORLG00015003707	zmat3	51	76.000	Oryzias_latipes_hsok
ENSGMOG00000008558	zmat3	100	76.000	ENSOMEG00000011303	zmat3	77	76.250	Oryzias_melastigma
ENSGMOG00000008558	zmat3	99	68.033	ENSOGAG00000003252	ZMAT3	83	68.033	Otolemur_garnettii
ENSGMOG00000008558	zmat3	99	68.050	ENSOARG00000020713	ZMAT3	83	68.050	Ovis_aries
ENSGMOG00000008558	zmat3	95	69.099	ENSPPAG00000035483	ZMAT3	79	69.099	Pan_paniscus
ENSGMOG00000008558	zmat3	99	67.623	ENSPPRG00000004407	ZMAT3	83	67.623	Panthera_pardus
ENSGMOG00000008558	zmat3	99	67.623	ENSPTIG00000009929	ZMAT3	83	67.623	Panthera_tigris_altaica
ENSGMOG00000008558	zmat3	95	69.099	ENSPTRG00000015641	ZMAT3	79	69.099	Pan_troglodytes
ENSGMOG00000008558	zmat3	95	68.534	ENSPANG00000023167	ZMAT3	79	68.534	Papio_anubis
ENSGMOG00000008558	zmat3	100	70.082	ENSPKIG00000023370	zmat3	68	70.082	Paramormyrops_kingsleyae
ENSGMOG00000008558	zmat3	99	66.255	ENSPSIG00000014839	ZMAT3	82	66.255	Pelodiscus_sinensis
ENSGMOG00000008558	zmat3	100	72.016	ENSPMGG00000023924	zmat3	89	72.016	Periophthalmus_magnuspinnatus
ENSGMOG00000008558	zmat3	98	67.521	ENSPEMG00000019154	Zmat3	80	67.521	Peromyscus_maniculatus_bairdii
ENSGMOG00000008558	zmat3	100	77.510	ENSPFOG00000019206	zmat3	65	77.510	Poecilia_formosa
ENSGMOG00000008558	zmat3	100	78.512	ENSPLAG00000022572	zmat3	85	78.512	Poecilia_latipinna
ENSGMOG00000008558	zmat3	100	71.074	ENSPMEG00000004131	-	82	71.074	Poecilia_mexicana
ENSGMOG00000008558	zmat3	100	78.926	ENSPREG00000022632	zmat3	87	78.926	Poecilia_reticulata
ENSGMOG00000008558	zmat3	96	68.511	ENSPPYG00000014315	ZMAT3	79	69.099	Pongo_abelii
ENSGMOG00000008558	zmat3	99	66.255	ENSPCAG00000008585	ZMAT3	84	66.255	Procavia_capensis
ENSGMOG00000008558	zmat3	99	68.313	ENSPCOG00000022835	ZMAT3	83	68.313	Propithecus_coquereli
ENSGMOG00000008558	zmat3	95	68.240	ENSPVAG00000004489	ZMAT3	79	68.240	Pteropus_vampyrus
ENSGMOG00000008558	zmat3	100	76.446	ENSPNYG00000014350	zmat3	84	76.446	Pundamilia_nyererei
ENSGMOG00000008558	zmat3	100	69.880	ENSPNAG00000015664	zmat3	68	69.880	Pygocentrus_nattereri
ENSGMOG00000008558	zmat3	96	67.949	ENSRNOG00000010119	Zmat3	80	67.949	Rattus_norvegicus
ENSGMOG00000008558	zmat3	96	67.660	ENSRBIG00000029622	ZMAT3	79	68.240	Rhinopithecus_bieti
ENSGMOG00000008558	zmat3	96	67.660	ENSRROG00000038345	ZMAT3	79	68.240	Rhinopithecus_roxellana
ENSGMOG00000008558	zmat3	96	66.809	ENSSBOG00000033332	ZMAT3	79	68.240	Saimiri_boliviensis_boliviensis
ENSGMOG00000008558	zmat3	99	67.220	ENSSHAG00000016154	ZMAT3	82	67.213	Sarcophilus_harrisii
ENSGMOG00000008558	zmat3	100	70.370	ENSSFOG00015006984	zmat3	81	70.000	Scleropages_formosus
ENSGMOG00000008558	zmat3	99	75.502	ENSSMAG00000019540	-	55	75.502	Scophthalmus_maximus
ENSGMOG00000008558	zmat3	100	76.707	ENSSDUG00000016188	zmat3	74	76.707	Seriola_dumerili
ENSGMOG00000008558	zmat3	100	77.200	ENSSLDG00000018611	zmat3	74	76.707	Seriola_lalandi_dorsalis
ENSGMOG00000008558	zmat3	68	63.855	ENSSARG00000004901	ZMAT3	73	63.855	Sorex_araneus
ENSGMOG00000008558	zmat3	98	66.525	ENSSPUG00000014753	ZMAT3	82	66.525	Sphenodon_punctatus
ENSGMOG00000008558	zmat3	100	76.955	ENSSPAG00000011062	zmat3	75	76.955	Stegastes_partitus
ENSGMOG00000008558	zmat3	99	67.901	ENSSSCG00000033860	ZMAT3	83	67.901	Sus_scrofa
ENSGMOG00000008558	zmat3	98	68.220	ENSTGUG00000010765	-	80	68.220	Taeniopygia_guttata
ENSGMOG00000008558	zmat3	98	78.059	ENSTRUG00000004788	zmat3	86	76.860	Takifugu_rubripes
ENSGMOG00000008558	zmat3	100	75.203	ENSTNIG00000006781	zmat3	87	75.203	Tetraodon_nigroviridis
ENSGMOG00000008558	zmat3	75	74.834	ENSTBEG00000012359	ZMAT3	94	74.834	Tupaia_belangeri
ENSGMOG00000008558	zmat3	99	64.315	ENSTTRG00000004923	ZMAT3	82	64.315	Tursiops_truncatus
ENSGMOG00000008558	zmat3	99	68.182	ENSUAMG00000007623	ZMAT3	83	68.182	Ursus_americanus
ENSGMOG00000008558	zmat3	99	67.635	ENSUMAG00000007847	ZMAT3	83	67.635	Ursus_maritimus
ENSGMOG00000008558	zmat3	99	67.623	ENSVPAG00000006611	ZMAT3	83	67.623	Vicugna_pacos
ENSGMOG00000008558	zmat3	99	66.803	ENSVVUG00000004729	ZMAT3	83	68.050	Vulpes_vulpes
ENSGMOG00000008558	zmat3	97	63.793	ENSXETG00000007251	zmat3	79	63.793	Xenopus_tropicalis
ENSGMOG00000008558	zmat3	100	79.253	ENSXCOG00000008397	zmat3	86	79.253	Xiphophorus_couchianus
ENSGMOG00000008558	zmat3	100	78.313	ENSXMAG00000015188	zmat3	53	78.313	Xiphophorus_maculatus