EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000008611 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 17847 bases
Position: chrGeneScaffold_1686:64742-82588
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000009238	KH_1	PF00013.29	1.4e-38	1	2
ENSGMOP00000009238	KH_1	PF00013.29	1.4e-38	2	2
ENSGMOP00000009226	KH_1	PF00013.29	1.7e-38	1	2
ENSGMOP00000009226	KH_1	PF00013.29	1.7e-38	2	2
ENSGMOP00000009238	KH_2	PF07650.17	9.8e-10	1	1
ENSGMOP00000009226	KH_2	PF07650.17	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009477	-	1056	-	ENSGMOP00000009226	351 (aa)	-	UPI00023F1646
ENSGMOT00000009489	-	993	-	ENSGMOP00000009238	330 (aa)	-	UPI00023F1647

Gene Model

Click here to download ENSGMOG00000008611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000008611	-	98	48.563	ENSGMOG00000017799	-	72	48.563
ENSGMOG00000008611	-	98	53.614	ENSGMOG00000005953	zgc:110045	94	53.614
ENSGMOG00000008611	-	98	56.757	ENSGMOG00000001342	PCBP2	90	56.757
ENSGMOG00000008611	-	98	58.154	ENSGMOG00000009787	pcbp2	95	58.154
ENSGMOG00000008611	-	99	65.976	ENSGMOG00000011992	pcbp3	96	66.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008611	-	100	70.997	ENSAPOG00000016582	-	96	69.851	Acanthochromis_polyacanthus
ENSGMOG00000008611	-	100	69.789	ENSAPOG00000020003	pcbp3	86	69.789	Acanthochromis_polyacanthus
ENSGMOG00000008611	-	98	71.779	ENSAMEG00000001697	-	88	71.779	Ailuropoda_melanoleuca
ENSGMOG00000008611	-	100	66.856	ENSACIG00000010933	pcbp3	94	66.856	Amphilophus_citrinellus
ENSGMOG00000008611	-	100	68.843	ENSACIG00000002739	-	96	68.843	Amphilophus_citrinellus
ENSGMOG00000008611	-	100	70.091	ENSAOCG00000008592	-	97	70.091	Amphiprion_ocellaris
ENSGMOG00000008611	-	88	73.793	ENSAOCG00000007806	-	96	73.793	Amphiprion_ocellaris
ENSGMOG00000008611	-	100	67.139	ENSAPEG00000008011	pcbp3	95	67.139	Amphiprion_percula
ENSGMOG00000008611	-	99	70.821	ENSAPEG00000005209	-	95	70.821	Amphiprion_percula
ENSGMOG00000008611	-	100	70.695	ENSATEG00000009833	-	96	70.695	Anabas_testudineus
ENSGMOG00000008611	-	100	66.856	ENSATEG00000015787	-	99	66.856	Anabas_testudineus
ENSGMOG00000008611	-	98	56.989	ENSAPLG00000008951	-	80	56.117	Anas_platyrhynchos
ENSGMOG00000008611	-	98	69.725	ENSAPLG00000002975	-	95	69.725	Anas_platyrhynchos
ENSGMOG00000008611	-	99	61.383	ENSACAG00000009819	-	94	61.383	Anolis_carolinensis
ENSGMOG00000008611	-	99	67.529	ENSACAG00000004607	-	96	67.529	Anolis_carolinensis
ENSGMOG00000008611	-	75	80.242	ENSANAG00000030702	-	95	80.242	Aotus_nancymaae
ENSGMOG00000008611	-	100	67.139	ENSACLG00000011835	pcbp3	95	67.139	Astatotilapia_calliptera
ENSGMOG00000008611	-	100	70.695	ENSACLG00000003801	-	96	70.695	Astatotilapia_calliptera
ENSGMOG00000008611	-	100	67.674	ENSAMXG00000013588	-	99	67.674	Astyanax_mexicanus
ENSGMOG00000008611	-	98	52.408	ENSAMXG00000001760	zgc:110045	72	52.408	Astyanax_mexicanus
ENSGMOG00000008611	-	100	67.705	ENSAMXG00000003440	pcbp3	95	67.705	Astyanax_mexicanus
ENSGMOG00000008611	-	89	66.524	ENSCAFG00020019472	-	82	66.524	Canis_lupus_dingo
ENSGMOG00000008611	-	98	69.632	ENSCSAG00000007440	-	86	69.632	Chlorocebus_sabaeus
ENSGMOG00000008611	-	98	61.272	ENSCPBG00000000733	-	74	59.437	Chrysemys_picta_bellii
ENSGMOG00000008611	-	98	70.859	ENSCPBG00000012151	-	95	70.859	Chrysemys_picta_bellii
ENSGMOG00000008611	-	100	59.420	ENSCSEG00000016984	-	96	59.420	Cynoglossus_semilaevis
ENSGMOG00000008611	-	99	69.605	ENSCSEG00000000822	pcbp3	98	69.605	Cynoglossus_semilaevis
ENSGMOG00000008611	-	99	71.212	ENSCVAG00000005262	-	96	71.212	Cyprinodon_variegatus
ENSGMOG00000008611	-	100	67.330	ENSCVAG00000014482	pcbp3	95	67.330	Cyprinodon_variegatus
ENSGMOG00000008611	-	100	67.989	ENSDARG00000054378	pcbp3	96	67.989	Danio_rerio
ENSGMOG00000008611	-	98	67.692	ENSETEG00000015988	-	95	67.692	Echinops_telfairi
ENSGMOG00000008611	-	77	60.236	ENSEBUG00000016192	pcbp3	87	60.236	Eptatretus_burgeri
ENSGMOG00000008611	-	98	57.447	ENSEBUG00000007485	-	92	53.604	Eptatretus_burgeri
ENSGMOG00000008611	-	90	52.521	ENSEBUG00000005495	pcbp3	70	52.521	Eptatretus_burgeri
ENSGMOG00000008611	-	100	70.393	ENSELUG00000001560	-	95	67.806	Esox_lucius
ENSGMOG00000008611	-	100	66.479	ENSELUG00000003521	pcbp3	95	66.479	Esox_lucius
ENSGMOG00000008611	-	98	57.258	ENSFALG00000004411	-	76	56.383	Ficedula_albicollis
ENSGMOG00000008611	-	98	69.325	ENSFALG00000003949	-	95	69.325	Ficedula_albicollis
ENSGMOG00000008611	-	99	70.909	ENSFHEG00000006539	-	96	70.909	Fundulus_heteroclitus
ENSGMOG00000008611	-	100	69.486	ENSFHEG00000016615	pcbp3	94	69.486	Fundulus_heteroclitus
ENSGMOG00000008611	-	99	66.571	ENSGALG00000004394	-	96	66.571	Gallus_gallus
ENSGMOG00000008611	-	99	61.671	ENSGALG00000013155	-	98	61.207	Gallus_gallus
ENSGMOG00000008611	-	100	65.254	ENSGAFG00000011430	pcbp3	95	65.254	Gambusia_affinis
ENSGMOG00000008611	-	99	70.821	ENSGAFG00000010274	-	94	70.821	Gambusia_affinis
ENSGMOG00000008611	-	99	70.659	ENSGACG00000002266	-	95	70.659	Gasterosteus_aculeatus
ENSGMOG00000008611	-	100	66.856	ENSGACG00000014955	-	96	66.856	Gasterosteus_aculeatus
ENSGMOG00000008611	-	71	60.221	ENSGAGG00000006956	-	83	53.991	Gopherus_agassizii
ENSGMOG00000008611	-	87	64.808	ENSGAGG00000000271	-	99	64.808	Gopherus_agassizii
ENSGMOG00000008611	-	100	69.789	ENSHBUG00000010697	pcbp3	97	69.789	Haplochromis_burtoni
ENSGMOG00000008611	-	100	70.695	ENSHBUG00000021782	-	96	70.695	Haplochromis_burtoni
ENSGMOG00000008611	-	99	65.957	ENSHCOG00000006067	-	95	65.957	Hippocampus_comes
ENSGMOG00000008611	-	100	67.330	ENSHCOG00000017868	pcbp3	95	67.330	Hippocampus_comes
ENSGMOG00000008611	-	99	70.000	ENSIPUG00000006238	pcbp3	96	70.000	Ictalurus_punctatus
ENSGMOG00000008611	-	100	67.139	ENSKMAG00000003046	pcbp3	95	67.139	Kryptolebias_marmoratus
ENSGMOG00000008611	-	99	70.517	ENSKMAG00000018530	-	94	70.517	Kryptolebias_marmoratus
ENSGMOG00000008611	-	100	64.671	ENSLBEG00000006542	-	96	64.671	Labrus_bergylta
ENSGMOG00000008611	-	100	69.394	ENSLBEG00000006201	pcbp3	95	69.394	Labrus_bergylta
ENSGMOG00000008611	-	98	56.911	ENSLACG00000010804	zgc:110045	75	56.032	Latimeria_chalumnae
ENSGMOG00000008611	-	98	61.622	ENSLACG00000010386	pcbp3	73	61.622	Latimeria_chalumnae
ENSGMOG00000008611	-	98	60.983	ENSLOCG00000005058	zgc:110045	79	60.983	Lepisosteus_oculatus
ENSGMOG00000008611	-	98	69.939	ENSLOCG00000009369	pcbp3	95	69.939	Lepisosteus_oculatus
ENSGMOG00000008611	-	100	69.486	ENSMAMG00000011620	-	96	69.486	Mastacembelus_armatus
ENSGMOG00000008611	-	100	69.486	ENSMAMG00000022336	pcbp3	92	69.486	Mastacembelus_armatus
ENSGMOG00000008611	-	100	64.326	ENSMZEG00005014882	-	96	64.638	Maylandia_zebra
ENSGMOG00000008611	-	100	67.139	ENSMZEG00005008993	pcbp3	97	67.236	Maylandia_zebra
ENSGMOG00000008611	-	99	65.819	ENSMGAG00000001883	-	95	65.915	Meleagris_gallopavo
ENSGMOG00000008611	-	98	57.258	ENSMGAG00000006794	-	76	56.383	Meleagris_gallopavo
ENSGMOG00000008611	-	100	70.091	ENSMMOG00000005216	-	96	70.091	Mola_mola
ENSGMOG00000008611	-	100	68.675	ENSMMOG00000000730	pcbp3	87	68.675	Mola_mola
ENSGMOG00000008611	-	96	71.495	ENSMODG00000027884	-	93	71.495	Monodelphis_domestica
ENSGMOG00000008611	-	99	66.761	ENSMALG00000000691	pcbp3	94	66.761	Monopterus_albus
ENSGMOG00000008611	-	98	69.725	ENSMPUG00000001779	-	87	69.725	Mustela_putorius_furo
ENSGMOG00000008611	-	100	64.809	ENSNBRG00000016714	-	96	65.282	Neolamprologus_brichardi
ENSGMOG00000008611	-	100	67.045	ENSNBRG00000016409	-	94	67.045	Neolamprologus_brichardi
ENSGMOG00000008611	-	98	66.763	ENSOPRG00000003431	-	99	66.763	Ochotona_princeps
ENSGMOG00000008611	-	100	67.614	ENSONIG00000012122	-	99	66.289	Oreochromis_niloticus
ENSGMOG00000008611	-	100	70.695	ENSONIG00000004611	-	96	70.695	Oreochromis_niloticus
ENSGMOG00000008611	-	98	69.018	ENSOCUG00000002696	-	86	69.018	Oryctolagus_cuniculus
ENSGMOG00000008611	-	99	70.821	ENSORLG00000022739	-	95	70.821	Oryzias_latipes
ENSGMOG00000008611	-	100	70.091	ENSORLG00000000059	pcbp3	99	70.091	Oryzias_latipes
ENSGMOG00000008611	-	99	70.517	ENSORLG00020006124	-	95	70.517	Oryzias_latipes_hni
ENSGMOG00000008611	-	100	70.091	ENSORLG00020012671	pcbp3	97	70.091	Oryzias_latipes_hni
ENSGMOG00000008611	-	99	70.821	ENSORLG00015008051	-	94	70.821	Oryzias_latipes_hsok
ENSGMOG00000008611	-	100	70.091	ENSORLG00015000429	pcbp3	97	70.091	Oryzias_latipes_hsok
ENSGMOG00000008611	-	92	69.637	ENSOMEG00000020811	pcbp3	97	69.637	Oryzias_melastigma
ENSGMOG00000008611	-	99	70.821	ENSOMEG00000020162	-	95	70.821	Oryzias_melastigma
ENSGMOG00000008611	-	99	66.292	ENSOGAG00000008044	-	96	66.292	Otolemur_garnettii
ENSGMOG00000008611	-	71	59.429	ENSPKIG00000020913	-	83	55.330	Paramormyrops_kingsleyae
ENSGMOG00000008611	-	100	70.695	ENSPKIG00000019329	pcbp3	96	70.149	Paramormyrops_kingsleyae
ENSGMOG00000008611	-	75	69.202	ENSPSIG00000008350	-	67	69.202	Pelodiscus_sinensis
ENSGMOG00000008611	-	98	61.656	ENSPSIG00000014970	-	95	62.270	Pelodiscus_sinensis
ENSGMOG00000008611	-	99	66.761	ENSPMGG00000022383	pcbp3	95	66.761	Periophthalmus_magnuspinnatus
ENSGMOG00000008611	-	99	55.488	ENSPMAG00000004551	pcbp3	88	55.488	Petromyzon_marinus
ENSGMOG00000008611	-	71	60.000	ENSPMAG00000004637	-	92	59.218	Petromyzon_marinus
ENSGMOG00000008611	-	99	66.379	ENSPCIG00000028092	-	95	66.379	Phascolarctos_cinereus
ENSGMOG00000008611	-	100	66.479	ENSPLAG00000011449	pcbp3	87	66.479	Poecilia_latipinna
ENSGMOG00000008611	-	99	72.121	ENSPLAG00000004074	-	89	72.121	Poecilia_latipinna
ENSGMOG00000008611	-	91	78.378	ENSPMEG00000006653	-	95	78.378	Poecilia_mexicana
ENSGMOG00000008611	-	99	66.667	ENSPMEG00000021239	pcbp3	95	66.667	Poecilia_mexicana
ENSGMOG00000008611	-	100	68.485	ENSPREG00000015736	pcbp3	99	68.485	Poecilia_reticulata
ENSGMOG00000008611	-	99	70.821	ENSPREG00000020585	-	95	70.821	Poecilia_reticulata
ENSGMOG00000008611	-	100	70.393	ENSPNYG00000013205	-	96	70.393	Pundamilia_nyererei
ENSGMOG00000008611	-	100	70.091	ENSPNYG00000012326	pcbp3	95	70.091	Pundamilia_nyererei
ENSGMOG00000008611	-	56	61.261	ENSPNAG00000006838	zgc:110045	55	61.261	Pygocentrus_nattereri
ENSGMOG00000008611	-	100	70.695	ENSPNAG00000015104	pcbp3	96	70.695	Pygocentrus_nattereri
ENSGMOG00000008611	-	99	67.781	ENSPNAG00000008541	-	97	67.781	Pygocentrus_nattereri
ENSGMOG00000008611	-	98	69.632	ENSRNOG00000001245	Pcbp3	95	69.632	Rattus_norvegicus
ENSGMOG00000008611	-	98	62.349	ENSRBIG00000028177	-	96	60.335	Rhinopithecus_bieti
ENSGMOG00000008611	-	98	70.552	ENSSHAG00000007890	-	95	70.552	Sarcophilus_harrisii
ENSGMOG00000008611	-	100	70.997	ENSSFOG00015010205	pcbp3	99	68.182	Scleropages_formosus
ENSGMOG00000008611	-	99	66.857	ENSSFOG00015014706	pcbp3	94	66.857	Scleropages_formosus
ENSGMOG00000008611	-	98	62.577	ENSSFOG00015007118	-	93	62.577	Scleropages_formosus
ENSGMOG00000008611	-	100	69.789	ENSSMAG00000011929	pcbp3	97	69.789	Scophthalmus_maximus
ENSGMOG00000008611	-	100	70.393	ENSSMAG00000003135	-	96	70.393	Scophthalmus_maximus
ENSGMOG00000008611	-	100	67.045	ENSSDUG00000011608	pcbp3	98	67.045	Seriola_dumerili
ENSGMOG00000008611	-	100	66.964	ENSSDUG00000008502	-	94	66.964	Seriola_dumerili
ENSGMOG00000008611	-	100	70.997	ENSSLDG00000020161	-	94	70.997	Seriola_lalandi_dorsalis
ENSGMOG00000008611	-	100	67.045	ENSSLDG00000008518	pcbp3	98	67.045	Seriola_lalandi_dorsalis
ENSGMOG00000008611	-	98	57.143	ENSSPUG00000013214	-	92	60.127	Sphenodon_punctatus
ENSGMOG00000008611	-	88	73.793	ENSSPAG00000004190	-	96	73.793	Stegastes_partitus
ENSGMOG00000008611	-	100	60.355	ENSSPAG00000023341	-	94	59.581	Stegastes_partitus
ENSGMOG00000008611	-	98	64.724	ENSTGUG00000008158	-	95	64.724	Taeniopygia_guttata
ENSGMOG00000008611	-	98	69.846	ENSTGUG00000003316	-	95	69.846	Taeniopygia_guttata
ENSGMOG00000008611	-	91	71.000	ENSTRUG00000006280	-	89	71.000	Takifugu_rubripes
ENSGMOG00000008611	-	100	68.529	ENSTRUG00000013604	pcbp3	94	68.529	Takifugu_rubripes
ENSGMOG00000008611	-	99	66.282	ENSTTRG00000015075	-	96	66.282	Tursiops_truncatus
ENSGMOG00000008611	-	94	55.618	ENSXETG00000010491	pcbp2	74	55.618	Xenopus_tropicalis
ENSGMOG00000008611	-	98	69.632	ENSXETG00000011483	pcbp1	95	69.632	Xenopus_tropicalis
ENSGMOG00000008611	-	99	66.667	ENSXCOG00000020481	pcbp3	95	66.667	Xiphophorus_couchianus
ENSGMOG00000008611	-	99	71.125	ENSXMAG00000028711	-	94	71.125	Xiphophorus_maculatus
ENSGMOG00000008611	-	100	67.139	ENSXMAG00000008175	pcbp3	95	67.139	Xiphophorus_maculatus