EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008653 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 22224 bases
Position: chrGeneScaffold_3498:63562-85785
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000009266	MIF4G_like	PF09088.11	1.5e-36	1	1
ENSGMOP00000009266	MIF4G_like_2	PF09090.11	8.7e-86	1	1
ENSGMOP00000009266	MIF4G	PF02854.19	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009518	NCBP1-201	2412	-	ENSGMOP00000009266	803 (aa)	-	UPI00023F1446

Gene Model

Click here to download ENSGMOG00000008653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008653	NCBP1	99	79.623	ENSG00000136937	NCBP1	99	79.623	Homo_sapiens
ENSGMOG00000008653	NCBP1	99	91.834	ENSAPOG00000008002	NCBP1	100	91.834	Acanthochromis_polyacanthus
ENSGMOG00000008653	NCBP1	99	79.674	ENSAMEG00000004763	NCBP1	99	79.674	Ailuropoda_melanoleuca
ENSGMOG00000008653	NCBP1	99	90.704	ENSACIG00000000274	NCBP1	100	90.704	Amphilophus_citrinellus
ENSGMOG00000008653	NCBP1	99	92.085	ENSAOCG00000021148	NCBP1	100	92.085	Amphiprion_ocellaris
ENSGMOG00000008653	NCBP1	99	92.085	ENSAPEG00000001701	NCBP1	100	92.085	Amphiprion_percula
ENSGMOG00000008653	NCBP1	99	91.583	ENSATEG00000006929	NCBP1	100	91.583	Anabas_testudineus
ENSGMOG00000008653	NCBP1	94	81.078	ENSAPLG00000016318	NCBP1	99	81.603	Anas_platyrhynchos
ENSGMOG00000008653	NCBP1	99	80.549	ENSACAG00000004409	NCBP1	87	80.673	Anolis_carolinensis
ENSGMOG00000008653	NCBP1	99	77.610	ENSANAG00000025744	NCBP1	99	78.926	Aotus_nancymaae
ENSGMOG00000008653	NCBP1	99	90.075	ENSACLG00000014812	NCBP1	100	90.075	Astatotilapia_calliptera
ENSGMOG00000008653	NCBP1	99	88.582	ENSAMXG00000016364	NCBP1	100	88.582	Astyanax_mexicanus
ENSGMOG00000008653	NCBP1	99	79.748	ENSBTAG00000009732	NCBP1	99	85.498	Bos_taurus
ENSGMOG00000008653	NCBP1	99	36.275	WBGene00018156	ncbp-1	100	36.275	Caenorhabditis_elegans
ENSGMOG00000008653	NCBP1	99	79.623	ENSCJAG00000010840	NCBP1	99	84.762	Callithrix_jacchus
ENSGMOG00000008653	NCBP1	99	79.874	ENSCAFG00000002445	NCBP1	99	79.874	Canis_familiaris
ENSGMOG00000008653	NCBP1	98	79.693	ENSCAFG00020017997	NCBP1	96	86.783	Canis_lupus_dingo
ENSGMOG00000008653	NCBP1	99	79.623	ENSCHIG00000020139	NCBP1	99	79.623	Capra_hircus
ENSGMOG00000008653	NCBP1	50	86.500	ENSTSYG00000011914	NCBP1	99	84.472	Carlito_syrichta
ENSGMOG00000008653	NCBP1	80	72.179	ENSCAPG00000014252	NCBP1	90	72.179	Cavia_aperea
ENSGMOG00000008653	NCBP1	94	79.024	ENSCPOG00000012573	NCBP1	98	79.024	Cavia_porcellus
ENSGMOG00000008653	NCBP1	99	79.623	ENSCCAG00000032297	NCBP1	99	79.623	Cebus_capucinus
ENSGMOG00000008653	NCBP1	99	79.623	ENSCATG00000010052	NCBP1	99	79.623	Cercocebus_atys
ENSGMOG00000008653	NCBP1	99	79.623	ENSCLAG00000014339	NCBP1	99	79.623	Chinchilla_lanigera
ENSGMOG00000008653	NCBP1	99	79.623	ENSCSAG00000010929	NCBP1	99	79.623	Chlorocebus_sabaeus
ENSGMOG00000008653	NCBP1	88	79.245	ENSCHOG00000010332	NCBP1	91	74.783	Choloepus_hoffmanni
ENSGMOG00000008653	NCBP1	99	79.748	ENSCPBG00000024344	NCBP1	99	81.405	Chrysemys_picta_bellii
ENSGMOG00000008653	NCBP1	98	53.836	ENSCING00000008990	-	99	53.836	Ciona_intestinalis
ENSGMOG00000008653	NCBP1	98	53.558	ENSCSAVG00000005300	-	99	52.821	Ciona_savignyi
ENSGMOG00000008653	NCBP1	99	79.623	ENSCANG00000036913	NCBP1	99	79.623	Colobus_angolensis_palliatus
ENSGMOG00000008653	NCBP1	99	79.119	ENSCGRG00001015771	Ncbp1	99	79.119	Cricetulus_griseus_chok1gshd
ENSGMOG00000008653	NCBP1	98	79.108	ENSCGRG00000010311	Ncbp1	99	79.108	Cricetulus_griseus_crigri
ENSGMOG00000008653	NCBP1	99	91.206	ENSCSEG00000012377	NCBP1	100	91.206	Cynoglossus_semilaevis
ENSGMOG00000008653	NCBP1	99	90.088	ENSCVAG00000008795	NCBP1	100	90.088	Cyprinodon_variegatus
ENSGMOG00000008653	NCBP1	99	78.994	ENSDNOG00000006885	NCBP1	99	78.994	Dasypus_novemcinctus
ENSGMOG00000008653	NCBP1	99	75.469	ENSDORG00000013652	Ncbp1	99	75.469	Dipodomys_ordii
ENSGMOG00000008653	NCBP1	82	33.869	FBgn0038887	CG7907	88	33.869	Drosophila_melanogaster
ENSGMOG00000008653	NCBP1	99	56.571	FBgn0022942	Cbp80	99	56.625	Drosophila_melanogaster
ENSGMOG00000008653	NCBP1	88	75.378	ENSETEG00000009705	NCBP1	89	75.378	Echinops_telfairi
ENSGMOG00000008653	NCBP1	99	72.111	ENSEBUG00000008386	NCBP1	99	72.111	Eptatretus_burgeri
ENSGMOG00000008653	NCBP1	99	79.497	ENSEASG00005022795	NCBP1	99	79.497	Equus_asinus_asinus
ENSGMOG00000008653	NCBP1	99	79.623	ENSECAG00000013847	NCBP1	99	79.623	Equus_caballus
ENSGMOG00000008653	NCBP1	94	75.594	ENSEEUG00000015973	NCBP1	99	75.726	Erinaceus_europaeus
ENSGMOG00000008653	NCBP1	99	90.704	ENSELUG00000022519	NCBP1	100	90.704	Esox_lucius
ENSGMOG00000008653	NCBP1	99	79.748	ENSFCAG00000001206	NCBP1	99	79.748	Felis_catus
ENSGMOG00000008653	NCBP1	98	82.061	ENSFALG00000001193	NCBP1	99	82.592	Ficedula_albicollis
ENSGMOG00000008653	NCBP1	99	79.497	ENSFDAG00000010864	NCBP1	99	79.497	Fukomys_damarensis
ENSGMOG00000008653	NCBP1	99	90.590	ENSFHEG00000000655	NCBP1	100	90.590	Fundulus_heteroclitus
ENSGMOG00000008653	NCBP1	98	81.992	ENSGALG00000002087	NCBP1	99	82.309	Gallus_gallus
ENSGMOG00000008653	NCBP1	99	91.343	ENSGAFG00000017787	NCBP1	100	91.343	Gambusia_affinis
ENSGMOG00000008653	NCBP1	99	90.000	ENSGACG00000016772	NCBP1	99	90.000	Gasterosteus_aculeatus
ENSGMOG00000008653	NCBP1	99	81.887	ENSGAGG00000019483	NCBP1	99	81.887	Gopherus_agassizii
ENSGMOG00000008653	NCBP1	99	79.623	ENSGGOG00000001376	NCBP1	99	79.623	Gorilla_gorilla
ENSGMOG00000008653	NCBP1	99	90.075	ENSHBUG00000020843	NCBP1	100	90.075	Haplochromis_burtoni
ENSGMOG00000008653	NCBP1	99	69.434	ENSHGLG00000018112	-	99	69.434	Heterocephalus_glaber_female
ENSGMOG00000008653	NCBP1	99	79.497	ENSHGLG00000001882	NCBP1	99	79.497	Heterocephalus_glaber_female
ENSGMOG00000008653	NCBP1	99	79.497	ENSHGLG00100013014	NCBP1	99	79.497	Heterocephalus_glaber_male
ENSGMOG00000008653	NCBP1	99	69.182	ENSHGLG00100017373	-	99	69.182	Heterocephalus_glaber_male
ENSGMOG00000008653	NCBP1	74	85.666	ENSHCOG00000000204	NCBP1	87	85.666	Hippocampus_comes
ENSGMOG00000008653	NCBP1	99	87.940	ENSIPUG00000007275	ncbp1	100	87.940	Ictalurus_punctatus
ENSGMOG00000008653	NCBP1	99	79.623	ENSSTOG00000002695	NCBP1	99	79.623	Ictidomys_tridecemlineatus
ENSGMOG00000008653	NCBP1	99	91.080	ENSKMAG00000003594	NCBP1	99	92.292	Kryptolebias_marmoratus
ENSGMOG00000008653	NCBP1	99	89.963	ENSLBEG00000011661	NCBP1	100	89.963	Labrus_bergylta
ENSGMOG00000008653	NCBP1	99	76.090	ENSLACG00000013955	NCBP1	99	76.332	Latimeria_chalumnae
ENSGMOG00000008653	NCBP1	99	75.622	ENSLOCG00000009579	NCBP1	99	75.622	Lepisosteus_oculatus
ENSGMOG00000008653	NCBP1	99	79.497	ENSLAFG00000005999	NCBP1	99	79.497	Loxodonta_africana
ENSGMOG00000008653	NCBP1	99	79.623	ENSMFAG00000030994	NCBP1	99	79.623	Macaca_fascicularis
ENSGMOG00000008653	NCBP1	98	79.464	ENSMMUG00000012281	NCBP1	99	79.491	Macaca_mulatta
ENSGMOG00000008653	NCBP1	99	79.623	ENSMNEG00000042790	NCBP1	99	79.623	Macaca_nemestrina
ENSGMOG00000008653	NCBP1	99	79.623	ENSMLEG00000030374	NCBP1	99	79.623	Mandrillus_leucophaeus
ENSGMOG00000008653	NCBP1	99	90.201	ENSMAMG00000014806	NCBP1	100	90.201	Mastacembelus_armatus
ENSGMOG00000008653	NCBP1	99	90.075	ENSMZEG00005003469	NCBP1	100	90.075	Maylandia_zebra
ENSGMOG00000008653	NCBP1	97	88.129	ENSMZEG00005009290	-	100	88.129	Maylandia_zebra
ENSGMOG00000008653	NCBP1	99	78.635	ENSMAUG00000020583	Ncbp1	99	78.635	Mesocricetus_auratus
ENSGMOG00000008653	NCBP1	99	79.119	ENSMICG00000012682	NCBP1	99	79.119	Microcebus_murinus
ENSGMOG00000008653	NCBP1	99	79.119	ENSMOCG00000015818	Ncbp1	99	79.119	Microtus_ochrogaster
ENSGMOG00000008653	NCBP1	90	88.504	ENSMMOG00000002610	NCBP1	100	88.504	Mola_mola
ENSGMOG00000008653	NCBP1	99	79.371	ENSMODG00000003202	NCBP1	99	79.623	Monodelphis_domestica
ENSGMOG00000008653	NCBP1	99	90.452	ENSMALG00000003547	NCBP1	100	90.452	Monopterus_albus
ENSGMOG00000008653	NCBP1	99	79.245	MGP_CAROLIEiJ_G0025982	Ncbp1	99	79.245	Mus_caroli
ENSGMOG00000008653	NCBP1	99	79.245	ENSMUSG00000028330	Ncbp1	99	79.245	Mus_musculus
ENSGMOG00000008653	NCBP1	99	79.245	MGP_PahariEiJ_G0028318	Ncbp1	99	79.245	Mus_pahari
ENSGMOG00000008653	NCBP1	99	79.245	MGP_SPRETEiJ_G0026945	Ncbp1	99	79.245	Mus_spretus
ENSGMOG00000008653	NCBP1	99	80.000	ENSMPUG00000006399	NCBP1	99	80.000	Mustela_putorius_furo
ENSGMOG00000008653	NCBP1	98	78.699	ENSMLUG00000015201	NCBP1	99	78.699	Myotis_lucifugus
ENSGMOG00000008653	NCBP1	99	79.748	ENSNGAG00000014101	Ncbp1	99	79.748	Nannospalax_galili
ENSGMOG00000008653	NCBP1	73	94.273	ENSNBRG00000014674	NCBP1	94	94.273	Neolamprologus_brichardi
ENSGMOG00000008653	NCBP1	99	79.623	ENSNLEG00000016909	NCBP1	99	79.623	Nomascus_leucogenys
ENSGMOG00000008653	NCBP1	88	79.749	ENSMEUG00000010672	NCBP1	90	79.749	Notamacropus_eugenii
ENSGMOG00000008653	NCBP1	83	72.101	ENSOPRG00000002144	-	88	72.101	Ochotona_princeps
ENSGMOG00000008653	NCBP1	99	79.623	ENSODEG00000003232	NCBP1	99	79.623	Octodon_degus
ENSGMOG00000008653	NCBP1	99	90.075	ENSONIG00000001502	NCBP1	100	90.075	Oreochromis_niloticus
ENSGMOG00000008653	NCBP1	78	83.788	ENSOANG00000001918	NCBP1	100	83.788	Ornithorhynchus_anatinus
ENSGMOG00000008653	NCBP1	97	78.827	ENSOCUG00000013853	NCBP1	97	78.827	Oryctolagus_cuniculus
ENSGMOG00000008653	NCBP1	99	91.239	ENSORLG00000011008	NCBP1	100	91.239	Oryzias_latipes
ENSGMOG00000008653	NCBP1	99	91.364	ENSORLG00020017455	NCBP1	100	91.364	Oryzias_latipes_hni
ENSGMOG00000008653	NCBP1	99	91.364	ENSORLG00015012127	NCBP1	100	91.364	Oryzias_latipes_hsok
ENSGMOG00000008653	NCBP1	99	91.239	ENSOMEG00000020698	NCBP1	100	91.239	Oryzias_melastigma
ENSGMOG00000008653	NCBP1	99	79.548	ENSOGAG00000013888	NCBP1	99	79.548	Otolemur_garnettii
ENSGMOG00000008653	NCBP1	99	79.623	ENSOARG00000011233	NCBP1	99	79.623	Ovis_aries
ENSGMOG00000008653	NCBP1	99	79.623	ENSPPAG00000026462	NCBP1	99	79.623	Pan_paniscus
ENSGMOG00000008653	NCBP1	99	79.874	ENSPPRG00000022574	NCBP1	99	79.874	Panthera_pardus
ENSGMOG00000008653	NCBP1	99	79.874	ENSPTIG00000018507	NCBP1	99	79.874	Panthera_tigris_altaica
ENSGMOG00000008653	NCBP1	99	79.623	ENSPTRG00000021167	NCBP1	99	79.623	Pan_troglodytes
ENSGMOG00000008653	NCBP1	99	79.623	ENSPANG00000025591	NCBP1	99	79.623	Papio_anubis
ENSGMOG00000008653	NCBP1	99	86.164	ENSPKIG00000015861	NCBP1	99	86.164	Paramormyrops_kingsleyae
ENSGMOG00000008653	NCBP1	64	80.078	ENSPSIG00000009558	NCBP1	99	80.507	Pelodiscus_sinensis
ENSGMOG00000008653	NCBP1	99	86.449	ENSPMGG00000020476	NCBP1	100	86.449	Periophthalmus_magnuspinnatus
ENSGMOG00000008653	NCBP1	99	78.868	ENSPEMG00000020105	Ncbp1	99	78.868	Peromyscus_maniculatus_bairdii
ENSGMOG00000008653	NCBP1	99	68.035	ENSPMAG00000005533	NCBP1	99	68.035	Petromyzon_marinus
ENSGMOG00000008653	NCBP1	99	79.371	ENSPCIG00000015800	NCBP1	99	81.498	Phascolarctos_cinereus
ENSGMOG00000008653	NCBP1	99	91.114	ENSPFOG00000004158	NCBP1	100	91.114	Poecilia_formosa
ENSGMOG00000008653	NCBP1	99	91.343	ENSPLAG00000020002	NCBP1	100	91.343	Poecilia_latipinna
ENSGMOG00000008653	NCBP1	99	91.343	ENSPMEG00000019821	NCBP1	100	91.343	Poecilia_mexicana
ENSGMOG00000008653	NCBP1	99	91.092	ENSPREG00000006035	NCBP1	100	91.092	Poecilia_reticulata
ENSGMOG00000008653	NCBP1	99	79.623	ENSPPYG00000019426	NCBP1	99	79.623	Pongo_abelii
ENSGMOG00000008653	NCBP1	89	78.550	ENSPCAG00000009943	NCBP1	90	78.550	Procavia_capensis
ENSGMOG00000008653	NCBP1	81	84.211	ENSPCOG00000020024	NCBP1	98	84.211	Propithecus_coquereli
ENSGMOG00000008653	NCBP1	99	79.623	ENSPVAG00000005924	NCBP1	99	79.623	Pteropus_vampyrus
ENSGMOG00000008653	NCBP1	90	88.627	ENSPNYG00000002140	NCBP1	99	88.627	Pundamilia_nyererei
ENSGMOG00000008653	NCBP1	99	87.829	ENSPNAG00000027753	NCBP1	100	87.829	Pygocentrus_nattereri
ENSGMOG00000008653	NCBP1	99	79.245	ENSRNOG00000023605	Ncbp1	99	79.245	Rattus_norvegicus
ENSGMOG00000008653	NCBP1	99	79.623	ENSRBIG00000043175	NCBP1	99	79.623	Rhinopithecus_bieti
ENSGMOG00000008653	NCBP1	99	79.623	ENSRROG00000029767	NCBP1	99	79.623	Rhinopithecus_roxellana
ENSGMOG00000008653	NCBP1	99	79.623	ENSSBOG00000019378	NCBP1	98	85.610	Saimiri_boliviensis_boliviensis
ENSGMOG00000008653	NCBP1	68	74.525	ENSSHAG00000015882	NCBP1	72	75.573	Sarcophilus_harrisii
ENSGMOG00000008653	NCBP1	98	85.332	ENSSFOG00015001872	NCBP1	99	84.528	Scleropages_formosus
ENSGMOG00000008653	NCBP1	99	90.704	ENSSMAG00000007463	NCBP1	100	90.704	Scophthalmus_maximus
ENSGMOG00000008653	NCBP1	99	90.704	ENSSDUG00000007019	NCBP1	100	91.370	Seriola_dumerili
ENSGMOG00000008653	NCBP1	99	91.457	ENSSLDG00000021924	NCBP1	100	91.457	Seriola_lalandi_dorsalis
ENSGMOG00000008653	NCBP1	84	68.251	ENSSARG00000007274	NCBP1	86	68.251	Sorex_araneus
ENSGMOG00000008653	NCBP1	99	74.717	ENSSPUG00000008609	NCBP1	99	75.094	Sphenodon_punctatus
ENSGMOG00000008653	NCBP1	99	92.337	ENSSPAG00000012550	NCBP1	100	92.337	Stegastes_partitus
ENSGMOG00000008653	NCBP1	99	79.623	ENSSSCG00000005366	NCBP1	99	79.623	Sus_scrofa
ENSGMOG00000008653	NCBP1	99	77.107	ENSTGUG00000001472	NCBP1	99	77.889	Taeniopygia_guttata
ENSGMOG00000008653	NCBP1	99	89.322	ENSTRUG00000005287	NCBP1	100	89.322	Takifugu_rubripes
ENSGMOG00000008653	NCBP1	99	77.358	ENSTBEG00000004035	NCBP1	99	77.358	Tupaia_belangeri
ENSGMOG00000008653	NCBP1	87	82.266	ENSTTRG00000000507	NCBP1	88	82.266	Tursiops_truncatus
ENSGMOG00000008653	NCBP1	99	79.748	ENSUAMG00000005471	NCBP1	99	79.748	Ursus_americanus
ENSGMOG00000008653	NCBP1	96	77.649	ENSUMAG00000011865	NCBP1	99	79.215	Ursus_maritimus
ENSGMOG00000008653	NCBP1	99	76.226	ENSVPAG00000010537	NCBP1	99	76.226	Vicugna_pacos
ENSGMOG00000008653	NCBP1	99	79.874	ENSVVUG00000019725	NCBP1	99	79.874	Vulpes_vulpes
ENSGMOG00000008653	NCBP1	99	78.113	ENSXETG00000010179	ncbp1	99	77.862	Xenopus_tropicalis
ENSGMOG00000008653	NCBP1	99	90.715	ENSXMAG00000018253	NCBP1	100	90.715	Xiphophorus_maculatus