EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008761 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 8910 bases
Position: chrGeneScaffold_2708:109196-118105
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000009381	Beta-Casp	PF10996.8	4.6e-20	1	1
ENSGMOP00000009381	Lactamase_B	PF00753.27	4.3e-07	1	1
ENSGMOP00000009381	RMMBL	PF07521.12	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009634	-	2373	-	ENSGMOP00000009381	790 (aa)	-	UPI00023F1E33

Gene Model

Click here to download ENSGMOG00000008761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008761	cpsf2	100	83.586	ENSG00000165934	CPSF2	100	88.750	Homo_sapiens
ENSGMOG00000008761	cpsf2	100	90.025	ENSAPOG00000001242	cpsf2	100	90.025	Acanthochromis_polyacanthus
ENSGMOG00000008761	cpsf2	100	89.786	ENSACIG00000009331	cpsf2	100	89.786	Amphilophus_citrinellus
ENSGMOG00000008761	cpsf2	100	89.899	ENSAOCG00000014095	cpsf2	100	89.899	Amphiprion_ocellaris
ENSGMOG00000008761	cpsf2	100	89.899	ENSAPEG00000009158	cpsf2	100	89.899	Amphiprion_percula
ENSGMOG00000008761	cpsf2	96	89.108	ENSATEG00000017644	cpsf2	99	87.667	Anabas_testudineus
ENSGMOG00000008761	cpsf2	100	83.270	ENSAPLG00000006330	CPSF2	100	83.270	Anas_platyrhynchos
ENSGMOG00000008761	cpsf2	100	82.850	ENSACAG00000009245	CPSF2	100	82.850	Anolis_carolinensis
ENSGMOG00000008761	cpsf2	100	83.586	ENSANAG00000022915	CPSF2	100	83.586	Aotus_nancymaae
ENSGMOG00000008761	cpsf2	100	87.028	ENSAMXG00000018696	cpsf2	100	87.028	Astyanax_mexicanus
ENSGMOG00000008761	cpsf2	100	83.586	ENSBTAG00000010227	CPSF2	100	83.586	Bos_taurus
ENSGMOG00000008761	cpsf2	100	42.974	WBGene00017313	cpsf-2	100	43.023	Caenorhabditis_elegans
ENSGMOG00000008761	cpsf2	100	83.586	ENSCJAG00000018069	CPSF2	100	83.586	Callithrix_jacchus
ENSGMOG00000008761	cpsf2	100	83.460	ENSCAFG00000010909	CPSF2	100	83.460	Canis_familiaris
ENSGMOG00000008761	cpsf2	100	83.460	ENSCAFG00020020670	CPSF2	100	83.460	Canis_lupus_dingo
ENSGMOG00000008761	cpsf2	100	83.586	ENSCHIG00000023848	CPSF2	100	83.586	Capra_hircus
ENSGMOG00000008761	cpsf2	100	83.586	ENSTSYG00000009036	CPSF2	100	83.586	Carlito_syrichta
ENSGMOG00000008761	cpsf2	100	83.586	ENSCPOG00000010899	CPSF2	100	83.586	Cavia_porcellus
ENSGMOG00000008761	cpsf2	100	83.586	ENSCCAG00000028088	CPSF2	100	83.586	Cebus_capucinus
ENSGMOG00000008761	cpsf2	100	83.586	ENSCATG00000030132	CPSF2	100	83.586	Cercocebus_atys
ENSGMOG00000008761	cpsf2	100	83.586	ENSCLAG00000012404	CPSF2	100	83.586	Chinchilla_lanigera
ENSGMOG00000008761	cpsf2	100	83.586	ENSCSAG00000011300	CPSF2	100	83.586	Chlorocebus_sabaeus
ENSGMOG00000008761	cpsf2	100	78.283	ENSCHOG00000012904	CPSF2	100	78.283	Choloepus_hoffmanni
ENSGMOG00000008761	cpsf2	100	83.859	ENSCPBG00000008766	CPSF2	97	83.859	Chrysemys_picta_bellii
ENSGMOG00000008761	cpsf2	100	52.956	ENSCING00000007881	-	100	52.956	Ciona_intestinalis
ENSGMOG00000008761	cpsf2	94	83.580	ENSCANG00000041651	CPSF2	100	83.558	Colobus_angolensis_palliatus
ENSGMOG00000008761	cpsf2	100	83.207	ENSCGRG00001006901	Cpsf2	100	83.207	Cricetulus_griseus_chok1gshd
ENSGMOG00000008761	cpsf2	100	83.207	ENSCGRG00000012416	Cpsf2	100	83.207	Cricetulus_griseus_crigri
ENSGMOG00000008761	cpsf2	100	89.001	ENSCSEG00000004116	cpsf2	100	89.001	Cynoglossus_semilaevis
ENSGMOG00000008761	cpsf2	100	89.633	ENSCVAG00000000095	cpsf2	100	89.899	Cyprinodon_variegatus
ENSGMOG00000008761	cpsf2	100	86.055	ENSDARG00000028971	cpsf2	100	86.055	Danio_rerio
ENSGMOG00000008761	cpsf2	100	83.586	ENSDNOG00000042757	CPSF2	100	83.586	Dasypus_novemcinctus
ENSGMOG00000008761	cpsf2	100	83.586	ENSDORG00000013709	Cpsf2	100	83.586	Dipodomys_ordii
ENSGMOG00000008761	cpsf2	100	52.222	FBgn0027873	Cpsf100	100	52.593	Drosophila_melanogaster
ENSGMOG00000008761	cpsf2	100	76.166	ENSETEG00000012123	CPSF2	100	76.166	Echinops_telfairi
ENSGMOG00000008761	cpsf2	52	77.751	ENSEBUG00000012098	cpsf2	93	77.751	Eptatretus_burgeri
ENSGMOG00000008761	cpsf2	89	89.761	ENSEASG00005021193	CPSF2	100	89.761	Equus_asinus_asinus
ENSGMOG00000008761	cpsf2	100	83.460	ENSECAG00000023935	CPSF2	100	83.460	Equus_caballus
ENSGMOG00000008761	cpsf2	100	88.346	ENSELUG00000008442	cpsf2	100	88.346	Esox_lucius
ENSGMOG00000008761	cpsf2	100	83.460	ENSFCAG00000007886	CPSF2	100	83.460	Felis_catus
ENSGMOG00000008761	cpsf2	100	83.859	ENSFALG00000002412	CPSF2	100	83.859	Ficedula_albicollis
ENSGMOG00000008761	cpsf2	100	83.460	ENSFDAG00000006327	CPSF2	100	83.460	Fukomys_damarensis
ENSGMOG00000008761	cpsf2	96	89.136	ENSFHEG00000015465	cpsf2	98	89.091	Fundulus_heteroclitus
ENSGMOG00000008761	cpsf2	100	83.439	ENSGALG00000010783	CPSF2	100	83.965	Gallus_gallus
ENSGMOG00000008761	cpsf2	100	89.646	ENSGAFG00000001407	cpsf2	100	89.646	Gambusia_affinis
ENSGMOG00000008761	cpsf2	100	90.152	ENSGACG00000008418	cpsf2	100	90.152	Gasterosteus_aculeatus
ENSGMOG00000008761	cpsf2	100	83.733	ENSGAGG00000008287	CPSF2	100	83.733	Gopherus_agassizii
ENSGMOG00000008761	cpsf2	100	83.586	ENSGGOG00000011799	CPSF2	100	83.586	Gorilla_gorilla
ENSGMOG00000008761	cpsf2	100	89.886	ENSHBUG00000023466	cpsf2	100	89.886	Haplochromis_burtoni
ENSGMOG00000008761	cpsf2	100	83.586	ENSHGLG00000018311	CPSF2	100	83.586	Heterocephalus_glaber_female
ENSGMOG00000008761	cpsf2	100	83.586	ENSHGLG00100016460	CPSF2	100	83.586	Heterocephalus_glaber_male
ENSGMOG00000008761	cpsf2	100	88.636	ENSHCOG00000019527	cpsf2	98	88.636	Hippocampus_comes
ENSGMOG00000008761	cpsf2	100	87.909	ENSIPUG00000020857	cpsf2	100	87.909	Ictalurus_punctatus
ENSGMOG00000008761	cpsf2	100	83.586	ENSSTOG00000009528	CPSF2	100	83.586	Ictidomys_tridecemlineatus
ENSGMOG00000008761	cpsf2	100	83.460	ENSJJAG00000017925	Cpsf2	100	83.460	Jaculus_jaculus
ENSGMOG00000008761	cpsf2	100	88.510	ENSKMAG00000019429	cpsf2	100	88.510	Kryptolebias_marmoratus
ENSGMOG00000008761	cpsf2	95	89.453	ENSLBEG00000011585	cpsf2	100	89.880	Labrus_bergylta
ENSGMOG00000008761	cpsf2	100	82.174	ENSLACG00000019024	CPSF2	100	82.174	Latimeria_chalumnae
ENSGMOG00000008761	cpsf2	100	86.633	ENSLOCG00000014102	cpsf2	100	86.633	Lepisosteus_oculatus
ENSGMOG00000008761	cpsf2	100	83.375	ENSLAFG00000004891	CPSF2	100	83.375	Loxodonta_africana
ENSGMOG00000008761	cpsf2	100	83.586	ENSMFAG00000041212	CPSF2	100	83.586	Macaca_fascicularis
ENSGMOG00000008761	cpsf2	100	83.586	ENSMMUG00000000699	CPSF2	100	83.586	Macaca_mulatta
ENSGMOG00000008761	cpsf2	100	83.586	ENSMNEG00000031584	CPSF2	100	83.586	Macaca_nemestrina
ENSGMOG00000008761	cpsf2	100	83.586	ENSMLEG00000029394	CPSF2	100	83.586	Mandrillus_leucophaeus
ENSGMOG00000008761	cpsf2	100	89.381	ENSMAMG00000004235	cpsf2	100	89.381	Mastacembelus_armatus
ENSGMOG00000008761	cpsf2	100	90.013	ENSMZEG00005001769	cpsf2	100	90.013	Maylandia_zebra
ENSGMOG00000008761	cpsf2	100	83.207	ENSMGAG00000013122	CPSF2	100	83.733	Meleagris_gallopavo
ENSGMOG00000008761	cpsf2	100	83.207	ENSMAUG00000015160	Cpsf2	100	83.207	Mesocricetus_auratus
ENSGMOG00000008761	cpsf2	100	83.586	ENSMICG00000016441	CPSF2	100	83.586	Microcebus_murinus
ENSGMOG00000008761	cpsf2	100	83.207	ENSMOCG00000015372	Cpsf2	100	83.207	Microtus_ochrogaster
ENSGMOG00000008761	cpsf2	100	84.091	ENSMMOG00000015590	cpsf2	100	84.091	Mola_mola
ENSGMOG00000008761	cpsf2	100	83.586	ENSMODG00000002042	CPSF2	100	83.586	Monodelphis_domestica
ENSGMOG00000008761	cpsf2	100	85.967	ENSMALG00000022275	cpsf2	100	85.967	Monopterus_albus
ENSGMOG00000008761	cpsf2	100	83.207	ENSMUSG00000041781	Cpsf2	100	83.207	Mus_musculus
ENSGMOG00000008761	cpsf2	100	83.081	MGP_PahariEiJ_G0029791	Cpsf2	100	83.081	Mus_pahari
ENSGMOG00000008761	cpsf2	100	83.207	MGP_SPRETEiJ_G0018877	Cpsf2	100	83.207	Mus_spretus
ENSGMOG00000008761	cpsf2	100	83.586	ENSMPUG00000007617	CPSF2	98	83.586	Mustela_putorius_furo
ENSGMOG00000008761	cpsf2	100	83.460	ENSMLUG00000005570	CPSF2	100	83.460	Myotis_lucifugus
ENSGMOG00000008761	cpsf2	100	83.207	ENSNGAG00000020312	Cpsf2	100	83.207	Nannospalax_galili
ENSGMOG00000008761	cpsf2	100	89.899	ENSNBRG00000022402	cpsf2	100	89.899	Neolamprologus_brichardi
ENSGMOG00000008761	cpsf2	100	83.081	ENSNLEG00000017132	CPSF2	100	83.081	Nomascus_leucogenys
ENSGMOG00000008761	cpsf2	91	92.557	ENSMEUG00000008138	CPSF2	91	92.557	Notamacropus_eugenii
ENSGMOG00000008761	cpsf2	85	87.687	ENSOPRG00000008484	-	92	87.687	Ochotona_princeps
ENSGMOG00000008761	cpsf2	100	83.333	ENSODEG00000008682	CPSF2	100	83.333	Octodon_degus
ENSGMOG00000008761	cpsf2	100	89.773	ENSONIG00000005901	cpsf2	100	89.773	Oreochromis_niloticus
ENSGMOG00000008761	cpsf2	100	83.333	ENSOANG00000003822	CPSF2	100	83.333	Ornithorhynchus_anatinus
ENSGMOG00000008761	cpsf2	100	83.460	ENSOCUG00000005713	CPSF2	100	83.460	Oryctolagus_cuniculus
ENSGMOG00000008761	cpsf2	100	83.818	ENSORLG00000011628	cpsf2	100	83.818	Oryzias_latipes
ENSGMOG00000008761	cpsf2	100	89.254	ENSORLG00020016980	cpsf2	100	89.254	Oryzias_latipes_hni
ENSGMOG00000008761	cpsf2	100	89.254	ENSORLG00015011910	cpsf2	100	89.254	Oryzias_latipes_hsok
ENSGMOG00000008761	cpsf2	100	88.748	ENSOMEG00000022876	cpsf2	100	88.748	Oryzias_melastigma
ENSGMOG00000008761	cpsf2	100	80.730	ENSOARG00000012889	CPSF2	100	80.730	Ovis_aries
ENSGMOG00000008761	cpsf2	100	83.586	ENSPPAG00000039666	CPSF2	100	83.586	Pan_paniscus
ENSGMOG00000008761	cpsf2	99	83.439	ENSPPRG00000010869	CPSF2	100	83.439	Panthera_pardus
ENSGMOG00000008761	cpsf2	100	83.460	ENSPTIG00000021202	CPSF2	100	83.460	Panthera_tigris_altaica
ENSGMOG00000008761	cpsf2	100	83.586	ENSPTRG00000006651	CPSF2	100	83.586	Pan_troglodytes
ENSGMOG00000008761	cpsf2	100	83.586	ENSPANG00000017417	CPSF2	100	83.586	Papio_anubis
ENSGMOG00000008761	cpsf2	100	83.249	ENSPKIG00000021453	cpsf2	100	83.249	Paramormyrops_kingsleyae
ENSGMOG00000008761	cpsf2	100	83.102	ENSPSIG00000006289	CPSF2	100	83.102	Pelodiscus_sinensis
ENSGMOG00000008761	cpsf2	76	83.000	ENSPMGG00000002511	cpsf2	99	83.582	Periophthalmus_magnuspinnatus
ENSGMOG00000008761	cpsf2	100	83.333	ENSPEMG00000007917	Cpsf2	100	83.333	Peromyscus_maniculatus_bairdii
ENSGMOG00000008761	cpsf2	100	72.875	ENSPMAG00000006205	cpsf2	100	73.000	Petromyzon_marinus
ENSGMOG00000008761	cpsf2	100	83.586	ENSPCIG00000011393	CPSF2	100	83.586	Phascolarctos_cinereus
ENSGMOG00000008761	cpsf2	100	89.899	ENSPFOG00000018648	cpsf2	100	89.899	Poecilia_formosa
ENSGMOG00000008761	cpsf2	100	89.899	ENSPLAG00000019199	cpsf2	99	89.899	Poecilia_latipinna
ENSGMOG00000008761	cpsf2	96	89.895	ENSPMEG00000012100	cpsf2	100	89.481	Poecilia_mexicana
ENSGMOG00000008761	cpsf2	100	89.646	ENSPREG00000008960	cpsf2	100	89.646	Poecilia_reticulata
ENSGMOG00000008761	cpsf2	64	78.854	ENSPPYG00000029685	-	100	78.854	Pongo_abelii
ENSGMOG00000008761	cpsf2	100	83.586	ENSPCAG00000012477	CPSF2	100	83.586	Procavia_capensis
ENSGMOG00000008761	cpsf2	100	83.460	ENSPCOG00000026387	CPSF2	100	83.460	Propithecus_coquereli
ENSGMOG00000008761	cpsf2	64	90.306	ENSPVAG00000004223	CPSF2	65	90.306	Pteropus_vampyrus
ENSGMOG00000008761	cpsf2	100	89.899	ENSPNYG00000023356	cpsf2	100	89.899	Pundamilia_nyererei
ENSGMOG00000008761	cpsf2	100	88.035	ENSPNAG00000001849	cpsf2	100	88.035	Pygocentrus_nattereri
ENSGMOG00000008761	cpsf2	100	83.207	ENSRNOG00000005733	Cpsf2	100	83.207	Rattus_norvegicus
ENSGMOG00000008761	cpsf2	100	83.586	ENSRBIG00000044792	CPSF2	100	83.586	Rhinopithecus_bieti
ENSGMOG00000008761	cpsf2	100	83.586	ENSRROG00000034875	CPSF2	100	83.586	Rhinopithecus_roxellana
ENSGMOG00000008761	cpsf2	100	83.586	ENSSBOG00000024571	CPSF2	100	83.586	Saimiri_boliviensis_boliviensis
ENSGMOG00000008761	cpsf2	100	83.586	ENSSHAG00000010458	CPSF2	100	83.586	Sarcophilus_harrisii
ENSGMOG00000008761	cpsf2	100	88.665	ENSSFOG00015002117	cpsf2	100	88.791	Scleropages_formosus
ENSGMOG00000008761	cpsf2	100	90.013	ENSSMAG00000002001	cpsf2	100	89.811	Scophthalmus_maximus
ENSGMOG00000008761	cpsf2	100	90.278	ENSSDUG00000004084	cpsf2	100	90.278	Seriola_dumerili
ENSGMOG00000008761	cpsf2	100	90.025	ENSSLDG00000024330	cpsf2	100	90.025	Seriola_lalandi_dorsalis
ENSGMOG00000008761	cpsf2	57	93.333	ENSSARG00000009784	-	63	93.333	Sorex_araneus
ENSGMOG00000008761	cpsf2	100	83.228	ENSSPUG00000013485	CPSF2	100	83.228	Sphenodon_punctatus
ENSGMOG00000008761	cpsf2	100	89.394	ENSSPAG00000013284	cpsf2	100	89.394	Stegastes_partitus
ENSGMOG00000008761	cpsf2	100	83.460	ENSSSCG00000002447	CPSF2	100	83.460	Sus_scrofa
ENSGMOG00000008761	cpsf2	100	83.480	ENSTGUG00000012571	-	100	83.480	Taeniopygia_guttata
ENSGMOG00000008761	cpsf2	100	88.496	ENSTRUG00000003742	cpsf2	100	88.496	Takifugu_rubripes
ENSGMOG00000008761	cpsf2	100	87.154	ENSTNIG00000012228	cpsf2	100	88.161	Tetraodon_nigroviridis
ENSGMOG00000008761	cpsf2	91	82.489	ENSTBEG00000004530	CPSF2	94	82.489	Tupaia_belangeri
ENSGMOG00000008761	cpsf2	88	85.417	ENSTTRG00000008697	CPSF2	88	85.417	Tursiops_truncatus
ENSGMOG00000008761	cpsf2	100	83.586	ENSUAMG00000028071	CPSF2	100	83.586	Ursus_americanus
ENSGMOG00000008761	cpsf2	100	83.586	ENSUMAG00000005029	CPSF2	100	83.586	Ursus_maritimus
ENSGMOG00000008761	cpsf2	99	83.439	ENSVPAG00000003503	CPSF2	100	83.439	Vicugna_pacos
ENSGMOG00000008761	cpsf2	100	83.460	ENSVVUG00000024642	CPSF2	100	83.460	Vulpes_vulpes
ENSGMOG00000008761	cpsf2	100	82.472	ENSXETG00000010289	cpsf2	100	82.472	Xenopus_tropicalis
ENSGMOG00000008761	cpsf2	100	89.899	ENSXCOG00000001764	cpsf2	100	89.899	Xiphophorus_couchianus
ENSGMOG00000008761	cpsf2	100	89.899	ENSXMAG00000017048	cpsf2	100	89.899	Xiphophorus_maculatus