EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000008993 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3182 bases
Position: chrGeneScaffold_4044:50204-53385
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000009609	EXOSC1	PF10447.9	1.1e-15	1	1
ENSGMOP00000009609	ECR1_N	PF14382.6	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000009868	-	585	-	ENSGMOP00000009609	194 (aa)	-	UPI00023F1A09

Gene Model

Click here to download ENSGMOG00000008993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000008993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000008993	exosc1	98	80.105	ENSG00000171311	EXOSC1	98	80.105	Homo_sapiens
ENSGMOG00000008993	exosc1	100	95.361	ENSAPOG00000007822	exosc1	100	95.361	Acanthochromis_polyacanthus
ENSGMOG00000008993	exosc1	98	80.628	ENSAMEG00000000129	EXOSC1	98	80.628	Ailuropoda_melanoleuca
ENSGMOG00000008993	exosc1	95	94.595	ENSACIG00000018956	exosc1	91	94.595	Amphilophus_citrinellus
ENSGMOG00000008993	exosc1	100	95.876	ENSAOCG00000010699	exosc1	100	95.876	Amphiprion_ocellaris
ENSGMOG00000008993	exosc1	93	83.889	ENSAPEG00000012690	exosc1	97	83.889	Amphiprion_percula
ENSGMOG00000008993	exosc1	100	95.361	ENSATEG00000018683	exosc1	100	95.361	Anabas_testudineus
ENSGMOG00000008993	exosc1	96	76.471	ENSACAG00000002101	EXOSC1	96	76.471	Anolis_carolinensis
ENSGMOG00000008993	exosc1	98	80.105	ENSANAG00000034669	EXOSC1	98	80.105	Aotus_nancymaae
ENSGMOG00000008993	exosc1	100	95.361	ENSACLG00000021243	exosc1	100	95.361	Astatotilapia_calliptera
ENSGMOG00000008993	exosc1	100	93.299	ENSAMXG00000011116	exosc1	100	93.299	Astyanax_mexicanus
ENSGMOG00000008993	exosc1	98	80.628	ENSBTAG00000012699	EXOSC1	98	80.628	Bos_taurus
ENSGMOG00000008993	exosc1	94	36.649	WBGene00012966	exos-1	92	36.649	Caenorhabditis_elegans
ENSGMOG00000008993	exosc1	98	79.581	ENSCJAG00000016586	EXOSC1	98	79.581	Callithrix_jacchus
ENSGMOG00000008993	exosc1	98	80.105	ENSCAFG00000009068	EXOSC1	92	80.105	Canis_familiaris
ENSGMOG00000008993	exosc1	98	80.105	ENSCAFG00020006002	EXOSC1	92	80.105	Canis_lupus_dingo
ENSGMOG00000008993	exosc1	98	80.628	ENSCHIG00000015253	EXOSC1	98	80.628	Capra_hircus
ENSGMOG00000008993	exosc1	98	79.058	ENSTSYG00000000760	EXOSC1	98	79.058	Carlito_syrichta
ENSGMOG00000008993	exosc1	98	80.105	ENSCPOG00000001173	EXOSC1	98	80.105	Cavia_porcellus
ENSGMOG00000008993	exosc1	98	42.487	ENSCCAG00000023986	EXOSC1	98	42.487	Cebus_capucinus
ENSGMOG00000008993	exosc1	98	80.105	ENSCATG00000034114	EXOSC1	98	80.105	Cercocebus_atys
ENSGMOG00000008993	exosc1	98	80.105	ENSCLAG00000002463	EXOSC1	98	80.105	Chinchilla_lanigera
ENSGMOG00000008993	exosc1	98	79.581	ENSCSAG00000005870	EXOSC1	98	79.581	Chlorocebus_sabaeus
ENSGMOG00000008993	exosc1	95	67.935	ENSCHOG00000006477	EXOSC1	98	67.935	Choloepus_hoffmanni
ENSGMOG00000008993	exosc1	55	67.290	ENSCPBG00000011949	EXOSC1	88	67.290	Chrysemys_picta_bellii
ENSGMOG00000008993	exosc1	99	51.295	ENSCING00000022734	-	92	51.295	Ciona_intestinalis
ENSGMOG00000008993	exosc1	99	53.368	ENSCSAVG00000010865	-	98	53.368	Ciona_savignyi
ENSGMOG00000008993	exosc1	98	80.105	ENSCANG00000034159	EXOSC1	98	80.105	Colobus_angolensis_palliatus
ENSGMOG00000008993	exosc1	98	79.058	ENSCGRG00001000335	Exosc1	98	79.058	Cricetulus_griseus_chok1gshd
ENSGMOG00000008993	exosc1	98	79.058	ENSCGRG00000011602	Exosc1	98	79.058	Cricetulus_griseus_crigri
ENSGMOG00000008993	exosc1	100	82.474	ENSCSEG00000007895	exosc1	97	82.474	Cynoglossus_semilaevis
ENSGMOG00000008993	exosc1	100	87.629	ENSCVAG00000016748	exosc1	100	87.629	Cyprinodon_variegatus
ENSGMOG00000008993	exosc1	100	93.299	ENSDARG00000059841	exosc1	100	93.299	Danio_rerio
ENSGMOG00000008993	exosc1	74	77.241	ENSDNOG00000007983	EXOSC1	98	77.241	Dasypus_novemcinctus
ENSGMOG00000008993	exosc1	98	79.581	ENSDORG00000016528	Exosc1	98	79.581	Dipodomys_ordii
ENSGMOG00000008993	exosc1	95	47.368	FBgn0032346	Csl4	92	47.368	Drosophila_melanogaster
ENSGMOG00000008993	exosc1	98	78.534	ENSETEG00000002469	-	98	78.534	Echinops_telfairi
ENSGMOG00000008993	exosc1	97	64.062	ENSEBUG00000008164	exosc1	96	64.062	Eptatretus_burgeri
ENSGMOG00000008993	exosc1	98	71.204	ENSEASG00005008684	EXOSC1	98	71.204	Equus_asinus_asinus
ENSGMOG00000008993	exosc1	60	56.897	ENSECAG00000010621	EXOSC1	69	56.897	Equus_caballus
ENSGMOG00000008993	exosc1	98	79.058	ENSEEUG00000005647	EXOSC1	98	79.058	Erinaceus_europaeus
ENSGMOG00000008993	exosc1	99	90.355	ENSELUG00000017369	exosc1	87	90.355	Esox_lucius
ENSGMOG00000008993	exosc1	98	80.628	ENSFCAG00000040563	EXOSC1	92	80.628	Felis_catus
ENSGMOG00000008993	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSGMOG00000008993	exosc1	98	80.628	ENSFDAG00000000846	EXOSC1	98	80.628	Fukomys_damarensis
ENSGMOG00000008993	exosc1	100	86.082	ENSFHEG00000009154	exosc1	100	86.082	Fundulus_heteroclitus
ENSGMOG00000008993	exosc1	98	65.445	ENSGALG00000039917	EXOSC1	99	83.448	Gallus_gallus
ENSGMOG00000008993	exosc1	100	86.598	ENSGAFG00000010265	exosc1	95	86.598	Gambusia_affinis
ENSGMOG00000008993	exosc1	100	92.784	ENSGACG00000018936	exosc1	100	92.784	Gasterosteus_aculeatus
ENSGMOG00000008993	exosc1	98	76.440	ENSGAGG00000019192	EXOSC1	98	76.440	Gopherus_agassizii
ENSGMOG00000008993	exosc1	98	69.110	ENSGGOG00000003099	EXOSC1	98	69.110	Gorilla_gorilla
ENSGMOG00000008993	exosc1	100	95.361	ENSHBUG00000017857	exosc1	100	95.361	Haplochromis_burtoni
ENSGMOG00000008993	exosc1	98	80.105	ENSHGLG00000016927	EXOSC1	98	80.105	Heterocephalus_glaber_female
ENSGMOG00000008993	exosc1	98	80.105	ENSHGLG00100012208	EXOSC1	98	80.105	Heterocephalus_glaber_male
ENSGMOG00000008993	exosc1	100	94.330	ENSHCOG00000019882	exosc1	100	94.330	Hippocampus_comes
ENSGMOG00000008993	exosc1	100	90.206	ENSIPUG00000007685	exosc1	100	90.206	Ictalurus_punctatus
ENSGMOG00000008993	exosc1	98	79.581	ENSSTOG00000006615	EXOSC1	98	79.581	Ictidomys_tridecemlineatus
ENSGMOG00000008993	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSGMOG00000008993	exosc1	98	80.105	ENSJJAG00000013311	Exosc1	98	80.105	Jaculus_jaculus
ENSGMOG00000008993	exosc1	100	91.237	ENSKMAG00000001202	exosc1	82	91.237	Kryptolebias_marmoratus
ENSGMOG00000008993	exosc1	100	95.361	ENSLBEG00000011448	exosc1	100	95.361	Labrus_bergylta
ENSGMOG00000008993	exosc1	100	64.500	ENSLOCG00000003776	exosc1	100	64.500	Lepisosteus_oculatus
ENSGMOG00000008993	exosc1	98	80.105	ENSLAFG00000015983	EXOSC1	98	80.105	Loxodonta_africana
ENSGMOG00000008993	exosc1	98	80.105	ENSMFAG00000001493	EXOSC1	98	80.105	Macaca_fascicularis
ENSGMOG00000008993	exosc1	98	80.105	ENSMMUG00000020028	EXOSC1	98	73.333	Macaca_mulatta
ENSGMOG00000008993	exosc1	98	80.105	ENSMNEG00000029816	EXOSC1	98	80.105	Macaca_nemestrina
ENSGMOG00000008993	exosc1	98	74.346	ENSMLEG00000027643	EXOSC1	98	74.346	Mandrillus_leucophaeus
ENSGMOG00000008993	exosc1	100	94.330	ENSMAMG00000012200	exosc1	100	94.330	Mastacembelus_armatus
ENSGMOG00000008993	exosc1	100	95.361	ENSMZEG00005007042	exosc1	100	95.361	Maylandia_zebra
ENSGMOG00000008993	exosc1	98	69.110	ENSMAUG00000020462	-	98	69.110	Mesocricetus_auratus
ENSGMOG00000008993	exosc1	98	79.581	ENSMICG00000007664	EXOSC1	91	79.581	Microcebus_murinus
ENSGMOG00000008993	exosc1	97	74.603	ENSMOCG00000017124	-	96	74.603	Microtus_ochrogaster
ENSGMOG00000008993	exosc1	98	79.058	ENSMOCG00000006004	-	98	79.058	Microtus_ochrogaster
ENSGMOG00000008993	exosc1	100	69.588	ENSMMOG00000021403	exosc1	100	69.588	Mola_mola
ENSGMOG00000008993	exosc1	98	80.729	ENSMODG00000004213	EXOSC1	98	80.729	Monodelphis_domestica
ENSGMOG00000008993	exosc1	95	94.054	ENSMALG00000007061	exosc1	93	94.054	Monopterus_albus
ENSGMOG00000008993	exosc1	98	78.534	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.534	Mus_caroli
ENSGMOG00000008993	exosc1	98	78.534	ENSMUSG00000034321	Exosc1	98	78.534	Mus_musculus
ENSGMOG00000008993	exosc1	98	79.058	MGP_PahariEiJ_G0014449	Exosc1	98	79.058	Mus_pahari
ENSGMOG00000008993	exosc1	98	78.534	MGP_SPRETEiJ_G0023880	Exosc1	98	78.534	Mus_spretus
ENSGMOG00000008993	exosc1	98	80.628	ENSMPUG00000017044	EXOSC1	98	80.628	Mustela_putorius_furo
ENSGMOG00000008993	exosc1	98	80.105	ENSMLUG00000009228	EXOSC1	98	80.105	Myotis_lucifugus
ENSGMOG00000008993	exosc1	98	77.487	ENSNGAG00000022033	Exosc1	98	77.487	Nannospalax_galili
ENSGMOG00000008993	exosc1	100	74.227	ENSNBRG00000024007	exosc1	99	74.227	Neolamprologus_brichardi
ENSGMOG00000008993	exosc1	98	79.581	ENSNLEG00000013872	EXOSC1	98	79.581	Nomascus_leucogenys
ENSGMOG00000008993	exosc1	58	73.214	ENSMEUG00000002246	EXOSC1	97	73.214	Notamacropus_eugenii
ENSGMOG00000008993	exosc1	98	79.581	ENSOPRG00000005065	EXOSC1	98	79.581	Ochotona_princeps
ENSGMOG00000008993	exosc1	98	80.628	ENSODEG00000016709	EXOSC1	98	80.628	Octodon_degus
ENSGMOG00000008993	exosc1	100	95.361	ENSONIG00000017683	exosc1	99	95.361	Oreochromis_niloticus
ENSGMOG00000008993	exosc1	59	89.474	ENSOANG00000006563	EXOSC1	98	86.179	Ornithorhynchus_anatinus
ENSGMOG00000008993	exosc1	98	78.646	ENSOCUG00000011898	-	98	78.646	Oryctolagus_cuniculus
ENSGMOG00000008993	exosc1	98	74.346	ENSOCUG00000026461	-	98	74.346	Oryctolagus_cuniculus
ENSGMOG00000008993	exosc1	100	89.744	ENSORLG00000011595	exosc1	100	89.744	Oryzias_latipes
ENSGMOG00000008993	exosc1	100	89.744	ENSORLG00020005831	exosc1	100	89.744	Oryzias_latipes_hni
ENSGMOG00000008993	exosc1	100	90.256	ENSORLG00015004317	exosc1	100	90.256	Oryzias_latipes_hsok
ENSGMOG00000008993	exosc1	100	75.258	ENSOMEG00000013907	exosc1	99	75.258	Oryzias_melastigma
ENSGMOG00000008993	exosc1	98	79.058	ENSOGAG00000016259	EXOSC1	98	79.058	Otolemur_garnettii
ENSGMOG00000008993	exosc1	98	80.105	ENSOARG00000010136	EXOSC1	98	80.105	Ovis_aries
ENSGMOG00000008993	exosc1	98	74.093	ENSPPAG00000039842	EXOSC1	98	74.093	Pan_paniscus
ENSGMOG00000008993	exosc1	98	80.628	ENSPPRG00000023366	EXOSC1	98	80.628	Panthera_pardus
ENSGMOG00000008993	exosc1	98	80.628	ENSPTIG00000017701	EXOSC1	98	80.628	Panthera_tigris_altaica
ENSGMOG00000008993	exosc1	98	80.105	ENSPTRG00000002808	EXOSC1	98	80.105	Pan_troglodytes
ENSGMOG00000008993	exosc1	98	80.105	ENSPANG00000021324	EXOSC1	98	80.105	Papio_anubis
ENSGMOG00000008993	exosc1	100	90.722	ENSPKIG00000016037	exosc1	100	90.722	Paramormyrops_kingsleyae
ENSGMOG00000008993	exosc1	91	65.263	ENSPSIG00000013571	EXOSC1	98	78.512	Pelodiscus_sinensis
ENSGMOG00000008993	exosc1	100	81.959	ENSPMGG00000014002	exosc1	100	81.959	Periophthalmus_magnuspinnatus
ENSGMOG00000008993	exosc1	98	79.058	ENSPEMG00000010710	-	98	79.058	Peromyscus_maniculatus_bairdii
ENSGMOG00000008993	exosc1	95	68.817	ENSPMAG00000000195	exosc1	95	68.817	Petromyzon_marinus
ENSGMOG00000008993	exosc1	98	80.105	ENSPCIG00000002210	EXOSC1	97	80.105	Phascolarctos_cinereus
ENSGMOG00000008993	exosc1	100	86.082	ENSPFOG00000006755	exosc1	95	86.082	Poecilia_formosa
ENSGMOG00000008993	exosc1	100	86.082	ENSPLAG00000005880	exosc1	100	86.082	Poecilia_latipinna
ENSGMOG00000008993	exosc1	100	86.082	ENSPMEG00000015598	exosc1	95	86.082	Poecilia_mexicana
ENSGMOG00000008993	exosc1	100	73.711	ENSPREG00000000405	exosc1	94	73.711	Poecilia_reticulata
ENSGMOG00000008993	exosc1	98	80.105	ENSPPYG00000002531	EXOSC1	98	80.105	Pongo_abelii
ENSGMOG00000008993	exosc1	98	79.058	ENSPCAG00000009135	EXOSC1	98	79.058	Procavia_capensis
ENSGMOG00000008993	exosc1	98	73.298	ENSPCOG00000027539	EXOSC1	98	73.298	Propithecus_coquereli
ENSGMOG00000008993	exosc1	98	80.105	ENSPVAG00000003372	EXOSC1	98	80.105	Pteropus_vampyrus
ENSGMOG00000008993	exosc1	100	95.361	ENSPNYG00000021745	exosc1	100	95.361	Pundamilia_nyererei
ENSGMOG00000008993	exosc1	100	92.268	ENSPNAG00000001944	exosc1	100	92.268	Pygocentrus_nattereri
ENSGMOG00000008993	exosc1	98	79.058	ENSRNOG00000048708	Exosc1	98	79.058	Rattus_norvegicus
ENSGMOG00000008993	exosc1	98	80.105	ENSRBIG00000035618	EXOSC1	98	80.105	Rhinopithecus_bieti
ENSGMOG00000008993	exosc1	98	80.105	ENSRROG00000032589	EXOSC1	91	80.105	Rhinopithecus_roxellana
ENSGMOG00000008993	exosc1	64	37.500	YNL232W	CSL4	54	37.500	Saccharomyces_cerevisiae
ENSGMOG00000008993	exosc1	98	80.105	ENSSBOG00000000359	EXOSC1	98	80.105	Saimiri_boliviensis_boliviensis
ENSGMOG00000008993	exosc1	75	89.041	ENSSHAG00000018219	EXOSC1	99	89.041	Sarcophilus_harrisii
ENSGMOG00000008993	exosc1	100	87.629	ENSSFOG00015016289	-	100	87.629	Scleropages_formosus
ENSGMOG00000008993	exosc1	100	90.206	ENSSFOG00015009069	exosc1	100	90.206	Scleropages_formosus
ENSGMOG00000008993	exosc1	100	96.392	ENSSMAG00000003721	exosc1	100	96.392	Scophthalmus_maximus
ENSGMOG00000008993	exosc1	100	97.423	ENSSDUG00000002993	exosc1	100	97.423	Seriola_dumerili
ENSGMOG00000008993	exosc1	100	97.423	ENSSLDG00000025181	exosc1	100	97.423	Seriola_lalandi_dorsalis
ENSGMOG00000008993	exosc1	98	68.586	ENSSARG00000000162	EXOSC1	98	68.586	Sorex_araneus
ENSGMOG00000008993	exosc1	98	74.869	ENSSPUG00000012263	EXOSC1	98	74.869	Sphenodon_punctatus
ENSGMOG00000008993	exosc1	100	87.629	ENSSPAG00000016792	exosc1	83	87.629	Stegastes_partitus
ENSGMOG00000008993	exosc1	98	79.581	ENSSSCG00000010518	EXOSC1	89	79.581	Sus_scrofa
ENSGMOG00000008993	exosc1	98	77.487	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSGMOG00000008993	exosc1	98	80.526	ENSTRUG00000007706	exosc1	98	80.526	Takifugu_rubripes
ENSGMOG00000008993	exosc1	98	80.311	ENSTNIG00000014079	exosc1	97	80.311	Tetraodon_nigroviridis
ENSGMOG00000008993	exosc1	98	73.822	ENSTBEG00000006011	EXOSC1	98	73.822	Tupaia_belangeri
ENSGMOG00000008993	exosc1	94	81.967	ENSTTRG00000009887	EXOSC1	99	81.967	Tursiops_truncatus
ENSGMOG00000008993	exosc1	98	64.398	ENSUAMG00000010266	EXOSC1	98	64.398	Ursus_americanus
ENSGMOG00000008993	exosc1	98	64.398	ENSUMAG00000022002	EXOSC1	98	64.398	Ursus_maritimus
ENSGMOG00000008993	exosc1	98	80.105	ENSVVUG00000023192	EXOSC1	62	80.105	Vulpes_vulpes
ENSGMOG00000008993	exosc1	99	76.684	ENSXETG00000003434	exosc1	99	76.684	Xenopus_tropicalis
ENSGMOG00000008993	exosc1	62	88.430	ENSXCOG00000014499	exosc1	93	88.430	Xiphophorus_couchianus
ENSGMOG00000008993	exosc1	100	74.227	ENSXMAG00000023382	exosc1	94	74.227	Xiphophorus_maculatus