EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000009831 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 18981 bases
Position: chrGeneScaffold_3746:6418-25398
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000010529	RRM_1	PF00076.22	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000010816	-	4881	-	ENSGMOP00000010529	1627 (aa)	-	UPI00023F18C3

Gene Model

Click here to download ENSGMOG00000009831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000009831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000009831	setd1ba	59	90.159	ENSAPOG00000014731	setd1ba	52	90.159	Acanthochromis_polyacanthus
ENSGMOG00000009831	setd1ba	59	79.641	ENSACIG00000016453	setd1ba	51	79.641	Amphilophus_citrinellus
ENSGMOG00000009831	setd1ba	55	87.984	ENSAOCG00000012148	setd1ba	50	87.984	Amphiprion_ocellaris
ENSGMOG00000009831	setd1ba	58	88.254	ENSAPEG00000010762	setd1ba	52	88.254	Amphiprion_percula
ENSGMOG00000009831	setd1ba	59	91.111	ENSATEG00000021563	setd1ba	56	91.111	Anabas_testudineus
ENSGMOG00000009831	setd1ba	59	90.476	ENSACLG00000016584	setd1ba	52	90.476	Astatotilapia_calliptera
ENSGMOG00000009831	setd1ba	56	83.962	ENSAMXG00000020648	setd1ba	52	83.962	Astyanax_mexicanus
ENSGMOG00000009831	setd1ba	52	67.181	ENSCANG00000023445	SETD1B	50	67.181	Colobus_angolensis_palliatus
ENSGMOG00000009831	setd1ba	56	78.481	ENSCGRG00000018075	Setd1b	54	78.481	Cricetulus_griseus_crigri
ENSGMOG00000009831	setd1ba	59	89.841	ENSCSEG00000001458	setd1ba	53	89.841	Cynoglossus_semilaevis
ENSGMOG00000009831	setd1ba	59	86.520	ENSCVAG00000022068	setd1ba	52	86.520	Cyprinodon_variegatus
ENSGMOG00000009831	setd1ba	58	85.220	ENSDARG00000060847	setd1ba	50	85.220	Danio_rerio
ENSGMOG00000009831	setd1ba	56	79.048	ENSEASG00005012369	SETD1B	50	79.048	Equus_asinus_asinus
ENSGMOG00000009831	setd1ba	59	88.254	ENSELUG00000020846	setd1ba	51	88.254	Esox_lucius
ENSGMOG00000009831	setd1ba	59	88.889	ENSFHEG00000013126	setd1ba	53	88.889	Fundulus_heteroclitus
ENSGMOG00000009831	setd1ba	58	87.227	ENSGAFG00000008712	setd1ba	53	87.227	Gambusia_affinis
ENSGMOG00000009831	setd1ba	59	89.841	ENSGACG00000017002	setd1ba	59	89.841	Gasterosteus_aculeatus
ENSGMOG00000009831	setd1ba	59	90.476	ENSHBUG00000019992	setd1ba	52	90.476	Haplochromis_burtoni
ENSGMOG00000009831	setd1ba	59	87.462	ENSHCOG00000001951	setd1ba	53	87.462	Hippocampus_comes
ENSGMOG00000009831	setd1ba	59	83.019	ENSIPUG00000024741	setd1b	54	83.019	Ictalurus_punctatus
ENSGMOG00000009831	setd1ba	57	88.050	ENSKMAG00000007804	setd1ba	52	88.050	Kryptolebias_marmoratus
ENSGMOG00000009831	setd1ba	58	86.667	ENSLBEG00000020113	setd1ba	53	86.667	Labrus_bergylta
ENSGMOG00000009831	setd1ba	59	90.476	ENSMAMG00000011027	setd1ba	53	90.476	Mastacembelus_armatus
ENSGMOG00000009831	setd1ba	59	90.476	ENSMZEG00005026617	setd1ba	52	90.476	Maylandia_zebra
ENSGMOG00000009831	setd1ba	57	87.107	ENSMMOG00000008190	setd1ba	52	87.107	Mola_mola
ENSGMOG00000009831	setd1ba	59	90.159	ENSMALG00000005362	setd1ba	52	90.159	Monopterus_albus
ENSGMOG00000009831	setd1ba	59	88.924	ENSNBRG00000002915	setd1ba	52	88.924	Neolamprologus_brichardi
ENSGMOG00000009831	setd1ba	59	89.206	ENSONIG00000013898	setd1ba	52	89.206	Oreochromis_niloticus
ENSGMOG00000009831	setd1ba	59	87.736	ENSORLG00000008435	setd1ba	52	87.736	Oryzias_latipes
ENSGMOG00000009831	setd1ba	59	88.050	ENSORLG00020017079	setd1ba	52	88.050	Oryzias_latipes_hni
ENSGMOG00000009831	setd1ba	59	90.794	ENSOMEG00000002270	setd1ba	53	90.794	Oryzias_melastigma
ENSGMOG00000009831	setd1ba	54	81.169	ENSPSIG00000015966	-	51	81.169	Pelodiscus_sinensis
ENSGMOG00000009831	setd1ba	57	87.697	ENSPMGG00000011527	setd1ba	56	87.697	Periophthalmus_magnuspinnatus
ENSGMOG00000009831	setd1ba	59	89.524	ENSPFOG00000019768	setd1ba	52	89.524	Poecilia_formosa
ENSGMOG00000009831	setd1ba	59	89.206	ENSPLAG00000023459	setd1ba	53	89.206	Poecilia_latipinna
ENSGMOG00000009831	setd1ba	59	88.889	ENSPMEG00000020446	setd1ba	52	88.889	Poecilia_mexicana
ENSGMOG00000009831	setd1ba	59	89.841	ENSPREG00000011589	setd1ba	52	89.841	Poecilia_reticulata
ENSGMOG00000009831	setd1ba	59	88.924	ENSPNYG00000009484	setd1ba	52	88.924	Pundamilia_nyererei
ENSGMOG00000009831	setd1ba	58	88.438	ENSSMAG00000001244	setd1ba	51	88.438	Scophthalmus_maximus
ENSGMOG00000009831	setd1ba	58	90.476	ENSSDUG00000018313	setd1ba	53	90.476	Seriola_dumerili
ENSGMOG00000009831	setd1ba	55	88.760	ENSSLDG00000015543	setd1ba	50	88.760	Seriola_lalandi_dorsalis
ENSGMOG00000009831	setd1ba	59	90.476	ENSSPAG00000015470	setd1ba	52	90.476	Stegastes_partitus
ENSGMOG00000009831	setd1ba	58	87.658	ENSTRUG00000009533	setd1ba	54	87.658	Takifugu_rubripes
ENSGMOG00000009831	setd1ba	59	89.342	ENSTNIG00000009090	setd1ba	53	89.342	Tetraodon_nigroviridis
ENSGMOG00000009831	setd1ba	54	78.413	ENSVVUG00000016690	SETD1B	51	78.413	Vulpes_vulpes
ENSGMOG00000009831	setd1ba	55	80.259	ENSXETG00000003760	setd1b	50	80.259	Xenopus_tropicalis
ENSGMOG00000009831	setd1ba	58	86.997	ENSXCOG00000004451	setd1ba	52	86.997	Xiphophorus_couchianus
ENSGMOG00000009831	setd1ba	59	89.841	ENSXMAG00000014097	setd1ba	53	89.841	Xiphophorus_maculatus