EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000009882 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 8989 bases
Position: chrGeneScaffold_2580:78323-87311
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000010571	RRM_1	PF00076.22	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000010858	-	786	-	ENSGMOP00000010571	261 (aa)	-	UPI00023F198C

Gene Model

Click here to download ENSGMOG00000009882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000009882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000009882	alyref	69	57.447	ENSGMOG00000013122	-	100	57.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000009882	alyref	100	52.399	ENSAPOG00000000183	-	100	52.399	Acanthochromis_polyacanthus
ENSGMOG00000009882	alyref	99	63.370	ENSACIG00000006351	alyref	98	65.091	Amphilophus_citrinellus
ENSGMOG00000009882	alyref	100	49.117	ENSACIG00000020351	-	100	51.056	Amphilophus_citrinellus
ENSGMOG00000009882	alyref	100	69.343	ENSAOCG00000014012	alyref	100	71.898	Amphiprion_ocellaris
ENSGMOG00000009882	alyref	71	57.216	ENSAOCG00000019305	-	100	51.661	Amphiprion_ocellaris
ENSGMOG00000009882	alyref	100	69.343	ENSAPEG00000014603	alyref	100	71.898	Amphiprion_percula
ENSGMOG00000009882	alyref	71	59.794	ENSAPEG00000013527	-	100	51.661	Amphiprion_percula
ENSGMOG00000009882	alyref	100	70.000	ENSATEG00000004307	alyref	100	71.786	Anabas_testudineus
ENSGMOG00000009882	alyref	100	54.710	ENSATEG00000000382	-	100	54.412	Anabas_testudineus
ENSGMOG00000009882	alyref	52	67.647	ENSAPLG00000014745	-	100	65.217	Anas_platyrhynchos
ENSGMOG00000009882	alyref	100	67.273	ENSACLG00000008432	alyref	100	69.818	Astatotilapia_calliptera
ENSGMOG00000009882	alyref	100	51.449	ENSACLG00000010184	-	100	51.812	Astatotilapia_calliptera
ENSGMOG00000009882	alyref	100	66.548	ENSAMXG00000007359	alyref	100	69.039	Astyanax_mexicanus
ENSGMOG00000009882	alyref	99	45.745	ENSCING00000013568	-	99	46.043	Ciona_intestinalis
ENSGMOG00000009882	alyref	99	44.118	ENSCSAVG00000003324	-	99	44.364	Ciona_savignyi
ENSGMOG00000009882	alyref	100	69.485	ENSCSEG00000017800	alyref	100	70.588	Cynoglossus_semilaevis
ENSGMOG00000009882	alyref	100	72.491	ENSCVAG00000014869	alyref	100	70.000	Cyprinodon_variegatus
ENSGMOG00000009882	alyref	100	46.909	ENSCVAG00000007789	-	100	47.778	Cyprinodon_variegatus
ENSGMOG00000009882	alyref	100	66.548	ENSDARG00000077732	alyref	100	67.616	Danio_rerio
ENSGMOG00000009882	alyref	97	43.939	FBgn0010774	Ref1	73	48.718	Drosophila_melanogaster
ENSGMOG00000009882	alyref	100	38.828	ENSEBUG00000006305	alyref	100	41.241	Eptatretus_burgeri
ENSGMOG00000009882	alyref	99	51.341	ENSEBUG00000008253	alyref	95	49.808	Eptatretus_burgeri
ENSGMOG00000009882	alyref	100	61.372	ENSELUG00000008849	-	100	61.733	Esox_lucius
ENSGMOG00000009882	alyref	100	70.111	ENSELUG00000017178	alyref	100	72.325	Esox_lucius
ENSGMOG00000009882	alyref	61	71.519	ENSFALG00000011923	-	100	70.186	Ficedula_albicollis
ENSGMOG00000009882	alyref	100	70.111	ENSFHEG00000019426	alyref	100	72.325	Fundulus_heteroclitus
ENSGMOG00000009882	alyref	100	49.451	ENSFHEG00000004698	-	100	49.627	Fundulus_heteroclitus
ENSGMOG00000009882	alyref	100	67.518	ENSGAFG00000006014	alyref	100	70.803	Gambusia_affinis
ENSGMOG00000009882	alyref	100	48.889	ENSGAFG00000007573	-	100	48.148	Gambusia_affinis
ENSGMOG00000009882	alyref	100	67.273	ENSHBUG00000020196	alyref	100	69.818	Haplochromis_burtoni
ENSGMOG00000009882	alyref	100	52.330	ENSHBUG00000001454	-	100	52.688	Haplochromis_burtoni
ENSGMOG00000009882	alyref	98	45.683	ENSHCOG00000012825	-	94	46.792	Hippocampus_comes
ENSGMOG00000009882	alyref	100	67.416	ENSIPUG00000009469	alyref	99	68.539	Ictalurus_punctatus
ENSGMOG00000009882	alyref	100	49.814	ENSKMAG00000006462	-	100	49.438	Kryptolebias_marmoratus
ENSGMOG00000009882	alyref	100	69.455	ENSKMAG00000008912	alyref	100	72.727	Kryptolebias_marmoratus
ENSGMOG00000009882	alyref	75	55.122	ENSLBEG00000005387	-	70	53.431	Labrus_bergylta
ENSGMOG00000009882	alyref	100	67.148	ENSLBEG00000023118	alyref	90	69.314	Labrus_bergylta
ENSGMOG00000009882	alyref	99	48.315	ENSLBEG00000012930	-	99	46.768	Labrus_bergylta
ENSGMOG00000009882	alyref	78	62.385	ENSLOCG00000013879	alyref	89	66.667	Lepisosteus_oculatus
ENSGMOG00000009882	alyref	100	52.222	ENSMAMG00000005464	-	100	51.111	Mastacembelus_armatus
ENSGMOG00000009882	alyref	100	71.533	ENSMAMG00000003034	alyref	100	72.628	Mastacembelus_armatus
ENSGMOG00000009882	alyref	100	67.273	ENSMZEG00005008639	alyref	100	69.818	Maylandia_zebra
ENSGMOG00000009882	alyref	100	51.087	ENSMZEG00005012096	-	100	51.449	Maylandia_zebra
ENSGMOG00000009882	alyref	99	44.840	ENSMMOG00000007032	-	98	44.604	Mola_mola
ENSGMOG00000009882	alyref	99	70.896	ENSMMOG00000012458	alyref	97	71.956	Mola_mola
ENSGMOG00000009882	alyref	100	49.645	ENSMALG00000006054	-	100	50.000	Monopterus_albus
ENSGMOG00000009882	alyref	100	55.597	ENSMLUG00000006521	-	100	55.224	Myotis_lucifugus
ENSGMOG00000009882	alyref	98	52.941	ENSMLUG00000022467	-	98	49.632	Myotis_lucifugus
ENSGMOG00000009882	alyref	98	51.481	ENSMLUG00000028605	-	98	51.852	Myotis_lucifugus
ENSGMOG00000009882	alyref	100	56.631	ENSMLUG00000004098	-	100	58.555	Myotis_lucifugus
ENSGMOG00000009882	alyref	98	54.307	ENSMLUG00000030671	-	99	53.137	Myotis_lucifugus
ENSGMOG00000009882	alyref	100	55.720	ENSMLUG00000014372	-	100	55.926	Myotis_lucifugus
ENSGMOG00000009882	alyref	98	53.817	ENSMLUG00000022178	-	98	53.053	Myotis_lucifugus
ENSGMOG00000009882	alyref	98	51.908	ENSMLUG00000009247	-	98	52.290	Myotis_lucifugus
ENSGMOG00000009882	alyref	100	64.394	ENSNGAG00000022014	-	100	64.751	Nannospalax_galili
ENSGMOG00000009882	alyref	85	96.000	ENSNBRG00000001747	alyref	76	100.000	Neolamprologus_brichardi
ENSGMOG00000009882	alyref	100	52.190	ENSNBRG00000017460	-	100	52.555	Neolamprologus_brichardi
ENSGMOG00000009882	alyref	100	66.786	ENSONIG00000019434	alyref	100	68.929	Oreochromis_niloticus
ENSGMOG00000009882	alyref	100	53.309	ENSONIG00000003296	-	100	54.212	Oreochromis_niloticus
ENSGMOG00000009882	alyref	67	55.191	ENSORLG00000001620	-	50	56.284	Oryzias_latipes
ENSGMOG00000009882	alyref	100	68.750	ENSORLG00020011942	alyref	100	70.588	Oryzias_latipes_hni
ENSGMOG00000009882	alyref	100	46.181	ENSORLG00020015673	-	99	47.970	Oryzias_latipes_hni
ENSGMOG00000009882	alyref	100	68.889	ENSORLG00015022664	alyref	100	71.111	Oryzias_latipes_hsok
ENSGMOG00000009882	alyref	100	46.181	ENSORLG00015015143	-	99	49.446	Oryzias_latipes_hsok
ENSGMOG00000009882	alyref	99	49.442	ENSOMEG00000007158	-	97	46.442	Oryzias_melastigma
ENSGMOG00000009882	alyref	100	67.528	ENSOMEG00000019176	alyref	100	69.742	Oryzias_melastigma
ENSGMOG00000009882	alyref	69	70.000	ENSPPAG00000036403	-	68	72.222	Pan_paniscus
ENSGMOG00000009882	alyref	99	61.404	ENSPKIG00000006233	-	80	68.561	Paramormyrops_kingsleyae
ENSGMOG00000009882	alyref	100	70.036	ENSPKIG00000007070	alyref	100	72.453	Paramormyrops_kingsleyae
ENSGMOG00000009882	alyref	99	67.790	ENSPMGG00000016600	alyref	91	69.259	Periophthalmus_magnuspinnatus
ENSGMOG00000009882	alyref	71	50.256	ENSPMGG00000012994	-	99	48.969	Periophthalmus_magnuspinnatus
ENSGMOG00000009882	alyref	100	62.069	ENSPEMG00000016628	-	100	62.069	Peromyscus_maniculatus_bairdii
ENSGMOG00000009882	alyref	100	66.909	ENSPFOG00000022825	alyref	99	70.182	Poecilia_formosa
ENSGMOG00000009882	alyref	100	47.464	ENSPFOG00000017094	-	100	47.253	Poecilia_formosa
ENSGMOG00000009882	alyref	100	47.464	ENSPLAG00000014380	-	100	47.253	Poecilia_latipinna
ENSGMOG00000009882	alyref	100	67.153	ENSPLAG00000006948	alyref	100	70.438	Poecilia_latipinna
ENSGMOG00000009882	alyref	100	66.909	ENSPMEG00000003547	alyref	100	70.182	Poecilia_mexicana
ENSGMOG00000009882	alyref	100	47.464	ENSPMEG00000023039	-	100	47.253	Poecilia_mexicana
ENSGMOG00000009882	alyref	100	48.339	ENSPREG00000003649	-	100	47.794	Poecilia_reticulata
ENSGMOG00000009882	alyref	100	67.153	ENSPREG00000015795	alyref	100	69.708	Poecilia_reticulata
ENSGMOG00000009882	alyref	99	50.000	ENSPNYG00000002879	-	98	50.368	Pundamilia_nyererei
ENSGMOG00000009882	alyref	100	67.273	ENSPNYG00000017498	alyref	100	69.818	Pundamilia_nyererei
ENSGMOG00000009882	alyref	100	66.667	ENSPNAG00000002531	alyref	100	67.766	Pygocentrus_nattereri
ENSGMOG00000009882	alyref	84	65.455	ENSSBOG00000030924	-	87	71.958	Saimiri_boliviensis_boliviensis
ENSGMOG00000009882	alyref	99	53.933	ENSSHAG00000000609	-	99	54.340	Sarcophilus_harrisii
ENSGMOG00000009882	alyref	99	51.246	ENSSHAG00000012866	-	99	52.672	Sarcophilus_harrisii
ENSGMOG00000009882	alyref	69	66.667	ENSSFOG00015003678	alyref	83	70.430	Scleropages_formosus
ENSGMOG00000009882	alyref	78	70.388	ENSSFOG00015003923	alyref	73	74.272	Scleropages_formosus
ENSGMOG00000009882	alyref	100	69.091	ENSSMAG00000009283	alyref	100	71.636	Scophthalmus_maximus
ENSGMOG00000009882	alyref	100	50.362	ENSSMAG00000011169	-	100	57.143	Scophthalmus_maximus
ENSGMOG00000009882	alyref	100	70.073	ENSSDUG00000016158	alyref	100	72.263	Seriola_dumerili
ENSGMOG00000009882	alyref	100	70.182	ENSSLDG00000017803	alyref	100	72.364	Seriola_lalandi_dorsalis
ENSGMOG00000009882	alyref	99	51.493	ENSSPAG00000017028	-	96	51.493	Stegastes_partitus
ENSGMOG00000009882	alyref	100	52.416	ENSTRUG00000003051	-	100	51.301	Takifugu_rubripes
ENSGMOG00000009882	alyref	100	63.763	ENSTNIG00000011595	alyref	100	64.599	Tetraodon_nigroviridis
ENSGMOG00000009882	alyref	100	51.515	ENSTNIG00000014136	-	100	48.864	Tetraodon_nigroviridis
ENSGMOG00000009882	alyref	70	71.196	ENSVVUG00000000272	-	82	73.224	Vulpes_vulpes
ENSGMOG00000009882	alyref	99	66.421	ENSXCOG00000018047	alyref	99	68.978	Xiphophorus_couchianus
ENSGMOG00000009882	alyref	100	48.352	ENSXMAG00000018086	-	100	48.881	Xiphophorus_maculatus
ENSGMOG00000009882	alyref	99	66.421	ENSXMAG00000012218	alyref	99	68.978	Xiphophorus_maculatus