EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000010161 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 16248 bases
Position: chrGeneScaffold_1874:50458-66705
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000010883	GTP_EFTU	PF00009.27	1.1e-62	1	1
ENSGMOP00000010883	GTP_EFTU_D2	PF03144.25	1.1e-13	1	1
ENSGMOP00000010883	EFG_IV	PF03764.18	1.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000011181	-	2184	-	ENSGMOP00000010883	727 (aa)	-	UPI00023F1B1A

Gene Model

Click here to download ENSGMOG00000010161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000010161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000010161	gfm1	95	34.925	ENSGMOG00000003177	gfm2	92	34.789
ENSGMOG00000010161	gfm1	69	33.862	ENSGMOG00000011722	eef2l2	66	33.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000010161	gfm1	99	78.838	ENSG00000168827	GFM1	100	95.000	Homo_sapiens
ENSGMOG00000010161	gfm1	92	84.408	ENSAPOG00000016489	gfm1	95	84.408	Acanthochromis_polyacanthus
ENSGMOG00000010161	gfm1	99	79.057	ENSAMEG00000013542	GFM1	95	79.057	Ailuropoda_melanoleuca
ENSGMOG00000010161	gfm1	100	81.181	ENSACIG00000014465	gfm1	94	81.181	Amphilophus_citrinellus
ENSGMOG00000010161	gfm1	100	85.144	ENSAOCG00000006023	gfm1	97	85.144	Amphiprion_ocellaris
ENSGMOG00000010161	gfm1	100	85.007	ENSAPEG00000024499	gfm1	99	84.573	Amphiprion_percula
ENSGMOG00000010161	gfm1	100	86.245	ENSATEG00000013789	gfm1	97	86.245	Anabas_testudineus
ENSGMOG00000010161	gfm1	100	77.610	ENSAPLG00000005022	GFM1	99	77.610	Anas_platyrhynchos
ENSGMOG00000010161	gfm1	100	78.680	ENSACAG00000006829	GFM1	98	78.680	Anolis_carolinensis
ENSGMOG00000010161	gfm1	99	78.976	ENSANAG00000035983	GFM1	96	78.976	Aotus_nancymaae
ENSGMOG00000010161	gfm1	100	86.382	ENSACLG00000016586	gfm1	99	85.185	Astatotilapia_calliptera
ENSGMOG00000010161	gfm1	100	86.657	ENSAMXG00000013435	gfm1	97	86.657	Astyanax_mexicanus
ENSGMOG00000010161	gfm1	99	79.224	ENSBTAG00000027795	GFM1	95	79.224	Bos_taurus
ENSGMOG00000010161	gfm1	97	56.454	WBGene00009246	gfm-1	93	56.454	Caenorhabditis_elegans
ENSGMOG00000010161	gfm1	99	78.976	ENSCJAG00000000363	GFM1	96	78.976	Callithrix_jacchus
ENSGMOG00000010161	gfm1	99	78.918	ENSCAFG00000009006	GFM1	100	78.351	Canis_familiaris
ENSGMOG00000010161	gfm1	99	78.918	ENSCAFG00020005878	GFM1	98	78.918	Canis_lupus_dingo
ENSGMOG00000010161	gfm1	99	79.501	ENSCHIG00000015220	GFM1	95	79.501	Capra_hircus
ENSGMOG00000010161	gfm1	99	78.562	ENSTSYG00000002013	GFM1	96	78.562	Carlito_syrichta
ENSGMOG00000010161	gfm1	99	69.326	ENSCAPG00000005699	GFM1	97	69.326	Cavia_aperea
ENSGMOG00000010161	gfm1	99	79.363	ENSCPOG00000001194	GFM1	95	79.363	Cavia_porcellus
ENSGMOG00000010161	gfm1	99	78.423	ENSCCAG00000025561	GFM1	96	78.423	Cebus_capucinus
ENSGMOG00000010161	gfm1	99	78.867	ENSCATG00000037622	GFM1	96	78.867	Cercocebus_atys
ENSGMOG00000010161	gfm1	99	78.670	ENSCLAG00000002503	GFM1	95	78.670	Chinchilla_lanigera
ENSGMOG00000010161	gfm1	99	79.006	ENSCSAG00000012162	GFM1	96	79.006	Chlorocebus_sabaeus
ENSGMOG00000010161	gfm1	99	70.263	ENSCHOG00000004867	GFM1	95	70.263	Choloepus_hoffmanni
ENSGMOG00000010161	gfm1	99	79.339	ENSCPBG00000018367	GFM1	97	79.339	Chrysemys_picta_bellii
ENSGMOG00000010161	gfm1	97	58.042	ENSCING00000011960	-	93	58.042	Ciona_intestinalis
ENSGMOG00000010161	gfm1	97	60.000	ENSCSAVG00000008514	-	99	58.840	Ciona_savignyi
ENSGMOG00000010161	gfm1	99	79.006	ENSCANG00000031714	GFM1	96	79.006	Colobus_angolensis_palliatus
ENSGMOG00000010161	gfm1	99	79.057	ENSCGRG00001022095	GFM1	95	79.057	Cricetulus_griseus_chok1gshd
ENSGMOG00000010161	gfm1	99	79.057	ENSCGRG00000012043	GFM1	95	79.057	Cricetulus_griseus_crigri
ENSGMOG00000010161	gfm1	100	80.330	ENSCSEG00000017088	gfm1	99	80.330	Cynoglossus_semilaevis
ENSGMOG00000010161	gfm1	100	87.758	ENSCVAG00000004126	gfm1	100	85.972	Cyprinodon_variegatus
ENSGMOG00000010161	gfm1	100	82.118	ENSDARG00000063624	gfm1	97	82.118	Danio_rerio
ENSGMOG00000010161	gfm1	56	78.484	ENSDNOG00000016385	-	100	78.484	Dasypus_novemcinctus
ENSGMOG00000010161	gfm1	99	77.040	ENSDORG00000014165	Gfm1	96	77.040	Dipodomys_ordii
ENSGMOG00000010161	gfm1	98	67.461	FBgn0263133	mEFG1	95	67.461	Drosophila_melanogaster
ENSGMOG00000010161	gfm1	99	71.823	ENSETEG00000019197	GFM1	95	71.823	Echinops_telfairi
ENSGMOG00000010161	gfm1	93	63.018	ENSEBUG00000012794	gfm1	99	63.018	Eptatretus_burgeri
ENSGMOG00000010161	gfm1	91	65.726	ENSEEUG00000000429	GFM1	92	65.726	Erinaceus_europaeus
ENSGMOG00000010161	gfm1	100	88.033	ENSELUG00000014728	gfm1	97	88.033	Esox_lucius
ENSGMOG00000010161	gfm1	99	78.809	ENSFCAG00000013291	GFM1	95	78.809	Felis_catus
ENSGMOG00000010161	gfm1	93	78.056	ENSFALG00000007619	GFM1	100	78.056	Ficedula_albicollis
ENSGMOG00000010161	gfm1	99	79.144	ENSFDAG00000016559	GFM1	96	79.144	Fukomys_damarensis
ENSGMOG00000010161	gfm1	100	86.795	ENSFHEG00000006091	gfm1	97	86.795	Fundulus_heteroclitus
ENSGMOG00000010161	gfm1	99	78.237	ENSGALG00000009634	GFM1	98	78.237	Gallus_gallus
ENSGMOG00000010161	gfm1	100	86.933	ENSGAFG00000012527	gfm1	97	86.933	Gambusia_affinis
ENSGMOG00000010161	gfm1	99	86.915	ENSGACG00000009864	gfm1	97	86.915	Gasterosteus_aculeatus
ENSGMOG00000010161	gfm1	99	78.838	ENSGGOG00000003085	GFM1	96	78.838	Gorilla_gorilla
ENSGMOG00000010161	gfm1	100	86.520	ENSHBUG00000002120	gfm1	97	86.520	Haplochromis_burtoni
ENSGMOG00000010161	gfm1	99	78.116	ENSHGLG00000016855	GFM1	95	78.116	Heterocephalus_glaber_female
ENSGMOG00000010161	gfm1	99	78.116	ENSHGLG00100013049	GFM1	95	78.116	Heterocephalus_glaber_male
ENSGMOG00000010161	gfm1	100	88.033	ENSHCOG00000007638	gfm1	98	87.120	Hippocampus_comes
ENSGMOG00000010161	gfm1	100	85.557	ENSIPUG00000005873	gfm1	97	85.557	Ictalurus_punctatus
ENSGMOG00000010161	gfm1	99	77.317	ENSSTOG00000010150	GFM1	97	77.317	Ictidomys_tridecemlineatus
ENSGMOG00000010161	gfm1	99	78.700	ENSJJAG00000016447	Gfm1	96	78.700	Jaculus_jaculus
ENSGMOG00000010161	gfm1	100	84.319	ENSKMAG00000020768	gfm1	97	84.319	Kryptolebias_marmoratus
ENSGMOG00000010161	gfm1	97	86.950	ENSLBEG00000021315	gfm1	100	86.950	Labrus_bergylta
ENSGMOG00000010161	gfm1	100	80.605	ENSLACG00000012295	GFM1	98	80.605	Latimeria_chalumnae
ENSGMOG00000010161	gfm1	100	78.249	ENSLOCG00000003778	gfm1	99	78.249	Lepisosteus_oculatus
ENSGMOG00000010161	gfm1	99	76.625	ENSLAFG00000010945	GFM1	99	75.380	Loxodonta_africana
ENSGMOG00000010161	gfm1	99	78.867	ENSMFAG00000035731	GFM1	96	78.867	Macaca_fascicularis
ENSGMOG00000010161	gfm1	99	78.867	ENSMMUG00000004961	GFM1	96	78.867	Macaca_mulatta
ENSGMOG00000010161	gfm1	99	78.591	ENSMNEG00000033245	GFM1	96	78.591	Macaca_nemestrina
ENSGMOG00000010161	gfm1	99	77.486	ENSMLEG00000030908	GFM1	99	76.716	Mandrillus_leucophaeus
ENSGMOG00000010161	gfm1	100	86.382	ENSMAMG00000011760	gfm1	97	86.382	Mastacembelus_armatus
ENSGMOG00000010161	gfm1	100	86.520	ENSMZEG00005016639	gfm1	97	86.520	Maylandia_zebra
ENSGMOG00000010161	gfm1	99	78.099	ENSMGAG00000010641	GFM1	97	78.099	Meleagris_gallopavo
ENSGMOG00000010161	gfm1	99	79.391	ENSMAUG00000000611	Gfm1	96	79.391	Mesocricetus_auratus
ENSGMOG00000010161	gfm1	99	78.976	ENSMICG00000049086	GFM1	95	78.976	Microcebus_murinus
ENSGMOG00000010161	gfm1	99	79.391	ENSMOCG00000000465	Gfm1	96	79.391	Microtus_ochrogaster
ENSGMOG00000010161	gfm1	100	85.970	ENSMMOG00000012538	gfm1	98	85.970	Mola_mola
ENSGMOG00000010161	gfm1	100	78.129	ENSMODG00000015673	GFM1	97	78.129	Monodelphis_domestica
ENSGMOG00000010161	gfm1	99	85.477	ENSMALG00000012508	gfm1	95	85.477	Monopterus_albus
ENSGMOG00000010161	gfm1	99	78.918	MGP_CAROLIEiJ_G0025052	Gfm1	95	78.918	Mus_caroli
ENSGMOG00000010161	gfm1	99	78.779	ENSMUSG00000027774	Gfm1	95	78.779	Mus_musculus
ENSGMOG00000010161	gfm1	99	78.502	MGP_PahariEiJ_G0026495	Gfm1	95	78.502	Mus_pahari
ENSGMOG00000010161	gfm1	99	78.779	MGP_SPRETEiJ_G0025994	Gfm1	95	78.779	Mus_spretus
ENSGMOG00000010161	gfm1	99	78.809	ENSMPUG00000002859	GFM1	95	78.809	Mustela_putorius_furo
ENSGMOG00000010161	gfm1	99	79.501	ENSMLUG00000000452	GFM1	95	79.501	Myotis_lucifugus
ENSGMOG00000010161	gfm1	99	78.423	ENSNGAG00000012375	Gfm1	96	78.423	Nannospalax_galili
ENSGMOG00000010161	gfm1	100	86.520	ENSNBRG00000004631	gfm1	99	86.520	Neolamprologus_brichardi
ENSGMOG00000010161	gfm1	99	78.838	ENSNLEG00000004176	GFM1	96	78.838	Nomascus_leucogenys
ENSGMOG00000010161	gfm1	94	70.029	ENSMEUG00000007784	GFM1	99	70.029	Notamacropus_eugenii
ENSGMOG00000010161	gfm1	99	77.040	ENSOPRG00000009860	GFM1	97	77.040	Ochotona_princeps
ENSGMOG00000010161	gfm1	99	79.640	ENSODEG00000004316	GFM1	95	79.640	Octodon_degus
ENSGMOG00000010161	gfm1	100	86.657	ENSONIG00000003772	gfm1	97	86.657	Oreochromis_niloticus
ENSGMOG00000010161	gfm1	99	78.976	ENSOCUG00000013561	GFM1	95	78.976	Oryctolagus_cuniculus
ENSGMOG00000010161	gfm1	98	86.517	ENSORLG00000006487	gfm1	100	86.517	Oryzias_latipes
ENSGMOG00000010161	gfm1	100	86.107	ENSORLG00020003362	gfm1	97	86.107	Oryzias_latipes_hni
ENSGMOG00000010161	gfm1	100	86.245	ENSORLG00015005829	gfm1	97	86.245	Oryzias_latipes_hsok
ENSGMOG00000010161	gfm1	100	86.657	ENSOMEG00000012894	gfm1	97	86.657	Oryzias_melastigma
ENSGMOG00000010161	gfm1	99	78.423	ENSOGAG00000008298	GFM1	95	78.423	Otolemur_garnettii
ENSGMOG00000010161	gfm1	99	78.621	ENSOARG00000002409	GFM1	99	78.621	Ovis_aries
ENSGMOG00000010161	gfm1	99	78.838	ENSPPAG00000033881	GFM1	96	78.838	Pan_paniscus
ENSGMOG00000010161	gfm1	99	78.809	ENSPPRG00000009281	GFM1	95	78.809	Panthera_pardus
ENSGMOG00000010161	gfm1	99	78.670	ENSPTIG00000012416	GFM1	95	78.670	Panthera_tigris_altaica
ENSGMOG00000010161	gfm1	99	78.838	ENSPTRG00000015570	GFM1	96	78.838	Pan_troglodytes
ENSGMOG00000010161	gfm1	99	78.729	ENSPANG00000016512	GFM1	96	78.729	Papio_anubis
ENSGMOG00000010161	gfm1	100	82.393	ENSPKIG00000004876	gfm1	97	82.393	Paramormyrops_kingsleyae
ENSGMOG00000010161	gfm1	99	79.890	ENSPSIG00000012567	GFM1	97	79.890	Pelodiscus_sinensis
ENSGMOG00000010161	gfm1	100	85.185	ENSPMGG00000014068	gfm1	100	85.185	Periophthalmus_magnuspinnatus
ENSGMOG00000010161	gfm1	99	78.779	ENSPEMG00000008942	Gfm1	95	78.779	Peromyscus_maniculatus_bairdii
ENSGMOG00000010161	gfm1	88	75.549	ENSPCIG00000020195	GFM1	94	78.325	Phascolarctos_cinereus
ENSGMOG00000010161	gfm1	100	88.033	ENSPFOG00000011022	gfm1	97	88.033	Poecilia_formosa
ENSGMOG00000010161	gfm1	100	88.033	ENSPLAG00000019585	gfm1	96	88.033	Poecilia_latipinna
ENSGMOG00000010161	gfm1	100	87.895	ENSPMEG00000012376	gfm1	97	87.895	Poecilia_mexicana
ENSGMOG00000010161	gfm1	100	87.895	ENSPREG00000001332	gfm1	92	87.895	Poecilia_reticulata
ENSGMOG00000010161	gfm1	99	78.700	ENSPPYG00000014244	GFM1	96	78.700	Pongo_abelii
ENSGMOG00000010161	gfm1	97	76.629	ENSPCAG00000008934	GFM1	100	76.629	Procavia_capensis
ENSGMOG00000010161	gfm1	99	78.976	ENSPCOG00000022259	GFM1	95	78.976	Propithecus_coquereli
ENSGMOG00000010161	gfm1	99	78.532	ENSPVAG00000013605	GFM1	95	78.532	Pteropus_vampyrus
ENSGMOG00000010161	gfm1	100	86.245	ENSPNYG00000006037	gfm1	98	86.245	Pundamilia_nyererei
ENSGMOG00000010161	gfm1	100	85.144	ENSPNAG00000001237	gfm1	97	85.144	Pygocentrus_nattereri
ENSGMOG00000010161	gfm1	99	79.334	ENSRNOG00000012873	Gfm1	95	79.334	Rattus_norvegicus
ENSGMOG00000010161	gfm1	99	78.591	ENSRBIG00000031363	GFM1	96	78.591	Rhinopithecus_bieti
ENSGMOG00000010161	gfm1	99	78.729	ENSRROG00000031081	GFM1	96	78.729	Rhinopithecus_roxellana
ENSGMOG00000010161	gfm1	95	55.444	YLR069C	-	90	55.444	Saccharomyces_cerevisiae
ENSGMOG00000010161	gfm1	99	78.838	ENSSBOG00000023252	GFM1	96	78.838	Saimiri_boliviensis_boliviensis
ENSGMOG00000010161	gfm1	100	78.955	ENSSHAG00000017772	GFM1	97	78.955	Sarcophilus_harrisii
ENSGMOG00000010161	gfm1	100	82.393	ENSSFOG00015003117	gfm1	99	81.843	Scleropages_formosus
ENSGMOG00000010161	gfm1	100	86.795	ENSSMAG00000013221	gfm1	97	86.795	Scophthalmus_maximus
ENSGMOG00000010161	gfm1	100	86.657	ENSSDUG00000018665	gfm1	97	86.657	Seriola_dumerili
ENSGMOG00000010161	gfm1	100	86.520	ENSSLDG00000020606	gfm1	97	86.520	Seriola_lalandi_dorsalis
ENSGMOG00000010161	gfm1	99	76.997	ENSSPUG00000018686	GFM1	98	76.997	Sphenodon_punctatus
ENSGMOG00000010161	gfm1	100	87.758	ENSSPAG00000008800	gfm1	97	87.758	Stegastes_partitus
ENSGMOG00000010161	gfm1	99	78.532	ENSSSCG00000025651	GFM1	95	78.532	Sus_scrofa
ENSGMOG00000010161	gfm1	100	85.420	ENSTRUG00000009244	gfm1	97	85.420	Takifugu_rubripes
ENSGMOG00000010161	gfm1	100	86.107	ENSTNIG00000007729	gfm1	97	86.107	Tetraodon_nigroviridis
ENSGMOG00000010161	gfm1	93	70.206	ENSTBEG00000017404	GFM1	89	70.206	Tupaia_belangeri
ENSGMOG00000010161	gfm1	99	79.086	ENSTTRG00000001735	GFM1	95	79.086	Tursiops_truncatus
ENSGMOG00000010161	gfm1	99	78.947	ENSUAMG00000026381	GFM1	95	78.947	Ursus_americanus
ENSGMOG00000010161	gfm1	99	78.947	ENSUMAG00000011268	GFM1	95	78.947	Ursus_maritimus
ENSGMOG00000010161	gfm1	99	75.762	ENSVPAG00000009444	GFM1	95	75.762	Vicugna_pacos
ENSGMOG00000010161	gfm1	99	78.720	ENSVVUG00000020091	GFM1	100	78.056	Vulpes_vulpes
ENSGMOG00000010161	gfm1	99	81.302	ENSXETG00000032551	GFM1	95	81.302	Xenopus_tropicalis
ENSGMOG00000010161	gfm1	52	87.566	ENSXCOG00000012590	gfm1	86	87.566	Xiphophorus_couchianus
ENSGMOG00000010161	gfm1	100	87.620	ENSXMAG00000000261	gfm1	97	87.620	Xiphophorus_maculatus