EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000010209 (Gene tree)
Gene ID: -
Gene Symbol: papola
Alias: papolb|si:ch211-199l3.6|wu:fc43b06|wu:fp01g10|zgc:109706
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 7287 bases
Position: chrGeneScaffold_2605:221492-228778
Accession: ZDB-GENE-030131-3507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000011051	PAP_RNA-bind	PF04926.15	9e-25	1	1
ENSGMOP00000011046	PAP_RNA-bind	PF04926.15	1e-24	1	1
ENSGMOP00000011019	PAP_RNA-bind	PF04926.15	3.2e-23	1	1
ENSGMOP00000011031	PAP_RNA-bind	PF04926.15	4.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000011329	-	1617	-	ENSGMOP00000011031	538 (aa)	-	UPI00023F1E7A
ENSGMOT00000011317	-	1617	-	ENSGMOP00000011019	538 (aa)	-	UPI00023F1E79
ENSGMOT00000011345	-	1608	-	ENSGMOP00000011046	535 (aa)	-	UPI00023F1E7B
ENSGMOT00000011351	-	1557	-	ENSGMOP00000011051	518 (aa)	-	UPI00023F1E7C

Gene Model

Click here to download ENSGMOG00000010209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000010209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000010209	papola	61	77.358	ENSGMOG00000018772	papolg	52	72.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000010209	papola	100	65.863	ENSG00000090060	PAPOLA	100	62.526	Homo_sapiens
ENSGMOG00000010209	papola	100	66.728	ENSAMEG00000014142	PAPOLA	73	66.362	Ailuropoda_melanoleuca
ENSGMOG00000010209	papola	99	65.328	ENSAPLG00000006645	PAPOLA	73	65.511	Anas_platyrhynchos
ENSGMOG00000010209	papola	100	65.385	ENSACAG00000013474	PAPOLA	70	70.259	Anolis_carolinensis
ENSGMOG00000010209	papola	100	66.288	ENSANAG00000018274	PAPOLA	62	87.647	Aotus_nancymaae
ENSGMOG00000010209	papola	64	81.737	ENSANAG00000027941	-	62	81.737	Aotus_nancymaae
ENSGMOG00000010209	papola	100	69.829	ENSAMXG00000018141	papola	62	90.936	Astyanax_mexicanus
ENSGMOG00000010209	papola	100	66.362	ENSBTAG00000004054	PAPOLA	73	65.996	Bos_taurus
ENSGMOG00000010209	papola	100	66.102	ENSCJAG00000006512	PAPOLA	62	87.647	Callithrix_jacchus
ENSGMOG00000010209	papola	100	66.362	ENSCAFG00000017783	PAPOLA	72	66.179	Canis_familiaris
ENSGMOG00000010209	papola	100	66.922	ENSCAFG00020011550	PAPOLA	67	86.875	Canis_lupus_dingo
ENSGMOG00000010209	papola	100	66.179	ENSCHIG00000025004	-	55	85.879	Capra_hircus
ENSGMOG00000010209	papola	100	66.423	ENSTSYG00000012384	PAPOLA	73	66.058	Carlito_syrichta
ENSGMOG00000010209	papola	100	66.728	ENSCPOG00000002648	PAPOLA	76	66.362	Cavia_porcellus
ENSGMOG00000010209	papola	100	65.880	ENSCCAG00000025120	PAPOLA	62	87.353	Cebus_capucinus
ENSGMOG00000010209	papola	100	66.353	ENSCATG00000018815	PAPOLA	63	87.647	Cercocebus_atys
ENSGMOG00000010209	papola	100	67.420	ENSCLAG00000016342	PAPOLA	73	66.179	Chinchilla_lanigera
ENSGMOG00000010209	papola	100	65.823	ENSCSAG00000010516	PAPOLA	73	65.461	Chlorocebus_sabaeus
ENSGMOG00000010209	papola	68	45.745	ENSCHOG00000001115	PAPOLA	50	45.479	Choloepus_hoffmanni
ENSGMOG00000010209	papola	100	64.954	ENSCPBG00000024125	PAPOLA	73	65.138	Chrysemys_picta_bellii
ENSGMOG00000010209	papola	99	65.736	ENSCANG00000000159	PAPOLA	77	65.336	Colobus_angolensis_palliatus
ENSGMOG00000010209	papola	100	62.113	ENSCGRG00001000229	-	56	80.403	Cricetulus_griseus_chok1gshd
ENSGMOG00000010209	papola	100	67.276	ENSCGRG00001022693	-	73	66.910	Cricetulus_griseus_chok1gshd
ENSGMOG00000010209	papola	99	63.168	ENSCGRG00001002732	-	76	62.799	Cricetulus_griseus_chok1gshd
ENSGMOG00000010209	papola	99	58.748	ENSCGRG00000001888	-	72	58.856	Cricetulus_griseus_crigri
ENSGMOG00000010209	papola	100	61.770	ENSCGRG00000000257	-	75	61.726	Cricetulus_griseus_crigri
ENSGMOG00000010209	papola	100	67.276	ENSCGRG00000003664	-	73	66.910	Cricetulus_griseus_crigri
ENSGMOG00000010209	papola	100	68.132	ENSDARG00000009585	papola	72	67.837	Danio_rerio
ENSGMOG00000010209	papola	91	63.211	ENSDORG00000013415	-	100	62.677	Dipodomys_ordii
ENSGMOG00000010209	papola	100	57.818	ENSETEG00000004889	PAPOLA	73	58.318	Echinops_telfairi
ENSGMOG00000010209	papola	100	67.806	ENSELUG00000018972	papola	73	68.402	Esox_lucius
ENSGMOG00000010209	papola	100	66.728	ENSFCAG00000006784	PAPOLA	73	66.362	Felis_catus
ENSGMOG00000010209	papola	100	63.158	ENSFALG00000002547	PAPOLA	73	63.139	Ficedula_albicollis
ENSGMOG00000010209	papola	100	66.179	ENSFDAG00000010370	PAPOLA	71	70.968	Fukomys_damarensis
ENSGMOG00000010209	papola	100	65.201	ENSGALG00000033099	PAPOLA	73	65.385	Gallus_gallus
ENSGMOG00000010209	papola	58	58.528	ENSGACG00000006142	-	62	58.528	Gasterosteus_aculeatus
ENSGMOG00000010209	papola	86	70.021	ENSGAGG00000020500	PAPOLA	69	70.236	Gopherus_agassizii
ENSGMOG00000010209	papola	100	65.863	ENSGGOG00000006287	PAPOLA	63	82.405	Gorilla_gorilla
ENSGMOG00000010209	papola	100	66.479	ENSHGLG00000007909	-	73	65.814	Heterocephalus_glaber_female
ENSGMOG00000010209	papola	100	60.367	ENSHGLG00000017457	-	75	60.405	Heterocephalus_glaber_female
ENSGMOG00000010209	papola	100	64.054	ENSHGLG00000007467	-	77	82.948	Heterocephalus_glaber_female
ENSGMOG00000010209	papola	100	66.292	ENSHGLG00100017273	PAPOLA	73	65.631	Heterocephalus_glaber_male
ENSGMOG00000010209	papola	100	86.040	ENSIPUG00000005919	papola	66	87.427	Ictalurus_punctatus
ENSGMOG00000010209	papola	100	66.545	ENSSTOG00000011471	PAPOLA	73	66.179	Ictidomys_tridecemlineatus
ENSGMOG00000010209	papola	100	66.604	ENSJJAG00000024340	Papola	73	65.746	Jaculus_jaculus
ENSGMOG00000010209	papola	100	60.291	ENSLACG00000018136	PAPOLA	73	59.927	Latimeria_chalumnae
ENSGMOG00000010209	papola	100	57.692	ENSLOCG00000008632	papola	72	57.532	Lepisosteus_oculatus
ENSGMOG00000010209	papola	100	65.448	ENSLAFG00000000946	PAPOLA	73	65.265	Loxodonta_africana
ENSGMOG00000010209	papola	100	66.856	ENSMFAG00000001792	PAPOLA	62	87.647	Macaca_fascicularis
ENSGMOG00000010209	papola	100	66.353	ENSMMUG00000018610	PAPOLA	73	65.461	Macaca_mulatta
ENSGMOG00000010209	papola	100	66.353	ENSMNEG00000043747	PAPOLA	63	87.390	Macaca_nemestrina
ENSGMOG00000010209	papola	100	66.856	ENSMLEG00000032066	PAPOLA	74	65.461	Mandrillus_leucophaeus
ENSGMOG00000010209	papola	100	65.201	ENSMGAG00000013228	-	87	65.385	Meleagris_gallopavo
ENSGMOG00000010209	papola	100	67.093	ENSMAUG00000017178	Papola	73	66.728	Mesocricetus_auratus
ENSGMOG00000010209	papola	100	66.423	ENSMICG00000010347	PAPOLA	62	87.647	Microcebus_murinus
ENSGMOG00000010209	papola	100	66.484	ENSMOCG00000021670	Papola	73	66.117	Microtus_ochrogaster
ENSGMOG00000010209	papola	99	58.634	ENSMODG00000001969	-	73	58.333	Monodelphis_domestica
ENSGMOG00000010209	papola	100	66.972	ENSMODG00000012887	-	73	66.606	Monodelphis_domestica
ENSGMOG00000010209	papola	100	66.667	MGP_CAROLIEiJ_G0018093	Papola	99	62.346	Mus_caroli
ENSGMOG00000010209	papola	100	66.910	ENSMUSG00000021111	Papola	99	62.848	Mus_musculus
ENSGMOG00000010209	papola	100	66.910	MGP_PahariEiJ_G0029850	Papola	99	62.848	Mus_pahari
ENSGMOG00000010209	papola	100	66.910	MGP_SPRETEiJ_G0018943	Papola	99	62.848	Mus_spretus
ENSGMOG00000010209	papola	100	66.545	ENSMPUG00000003054	PAPOLA	73	66.179	Mustela_putorius_furo
ENSGMOG00000010209	papola	100	65.876	ENSMLUG00000010922	PAPOLA	73	65.693	Myotis_lucifugus
ENSGMOG00000010209	papola	100	66.793	ENSNGAG00000022172	Papola	73	65.876	Nannospalax_galili
ENSGMOG00000010209	papola	100	62.172	ENSNLEG00000000625	PAPOLA	73	61.002	Nomascus_leucogenys
ENSGMOG00000010209	papola	100	66.850	ENSOPRG00000007625	PAPOLA	75	66.667	Ochotona_princeps
ENSGMOG00000010209	papola	57	57.338	ENSONIG00000001062	-	59	57.338	Oreochromis_niloticus
ENSGMOG00000010209	papola	100	65.607	ENSOANG00000013812	PAPOLA	71	66.163	Ornithorhynchus_anatinus
ENSGMOG00000010209	papola	100	63.686	ENSOCUG00000011531	PAPOLA	73	64.051	Oryctolagus_cuniculus
ENSGMOG00000010209	papola	100	66.362	ENSOGAG00000004611	PAPOLA	73	66.179	Otolemur_garnettii
ENSGMOG00000010209	papola	100	66.179	ENSOARG00000016579	-	73	65.814	Ovis_aries
ENSGMOG00000010209	papola	100	65.863	ENSPPAG00000030505	PAPOLA	61	82.405	Pan_paniscus
ENSGMOG00000010209	papola	100	66.728	ENSPPRG00000008616	PAPOLA	73	66.362	Panthera_pardus
ENSGMOG00000010209	papola	100	66.728	ENSPTIG00000018852	PAPOLA	73	66.362	Panthera_tigris_altaica
ENSGMOG00000010209	papola	100	65.863	ENSPTRG00000006704	PAPOLA	73	65.461	Pan_troglodytes
ENSGMOG00000010209	papola	100	66.353	ENSPANG00000025582	PAPOLA	62	87.647	Papio_anubis
ENSGMOG00000010209	papola	100	66.357	ENSPKIG00000014471	papola	73	66.543	Paramormyrops_kingsleyae
ENSGMOG00000010209	papola	100	65.455	ENSPSIG00000014157	PAPOLA	63	65.455	Pelodiscus_sinensis
ENSGMOG00000010209	papola	100	66.910	ENSPEMG00000000043	Papola	73	66.545	Peromyscus_maniculatus_bairdii
ENSGMOG00000010209	papola	100	66.415	ENSPCIG00000013234	PAPOLA	78	66.117	Phascolarctos_cinereus
ENSGMOG00000010209	papola	100	65.823	ENSPPYG00000006128	PAPOLA	75	65.461	Pongo_abelii
ENSGMOG00000010209	papola	100	64.717	ENSPCAG00000004199	PAPOLA	82	64.351	Procavia_capensis
ENSGMOG00000010209	papola	100	62.774	ENSPCOG00000022117	PAPOLA	60	80.882	Propithecus_coquereli
ENSGMOG00000010209	papola	100	65.996	ENSPVAG00000013925	PAPOLA	73	65.631	Pteropus_vampyrus
ENSGMOG00000010209	papola	100	70.209	ENSPNAG00000010467	papola	72	69.886	Pygocentrus_nattereri
ENSGMOG00000010209	papola	100	66.910	ENSRNOG00000004827	Papola	73	66.545	Rattus_norvegicus
ENSGMOG00000010209	papola	100	67.619	ENSRBIG00000038490	PAPOLA	61	87.126	Rhinopithecus_bieti
ENSGMOG00000010209	papola	100	65.863	ENSRROG00000025545	PAPOLA	75	66.234	Rhinopithecus_roxellana
ENSGMOG00000010209	papola	100	66.541	ENSSBOG00000024061	PAPOLA	61	87.725	Saimiri_boliviensis_boliviensis
ENSGMOG00000010209	papola	100	66.972	ENSSHAG00000015211	PAPOLA	73	66.606	Sarcophilus_harrisii
ENSGMOG00000010209	papola	100	67.100	ENSSFOG00015004431	papola	63	86.994	Scleropages_formosus
ENSGMOG00000010209	papola	100	43.487	ENSSDUG00000018247	-	70	42.418	Seriola_dumerili
ENSGMOG00000010209	papola	100	65.036	ENSSPUG00000005835	PAPOLA	73	64.964	Sphenodon_punctatus
ENSGMOG00000010209	papola	100	66.362	ENSSSCG00000002505	-	73	65.996	Sus_scrofa
ENSGMOG00000010209	papola	100	64.717	ENSTGUG00000012687	PAPOLA	73	64.791	Taeniopygia_guttata
ENSGMOG00000010209	papola	72	74.841	ENSTTRG00000005717	PAPOLA	53	74.841	Tursiops_truncatus
ENSGMOG00000010209	papola	100	66.545	ENSVPAG00000006464	PAPOLA	73	66.362	Vicugna_pacos
ENSGMOG00000010209	papola	100	66.478	ENSVVUG00000028340	PAPOLA	73	66.179	Vulpes_vulpes
ENSGMOG00000010209	papola	100	64.545	ENSXETG00000013949	papola	73	64.234	Xenopus_tropicalis