EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000010336 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 11287 bases
Position: chrGeneScaffold_1511:60023-71309
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000011066	AARP2CN	PF08142.12	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000011367	-	2451	-	ENSGMOP00000011066	816 (aa)	-	UPI00023F1EBC

Gene Model

Click here to download ENSGMOG00000010336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000010336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000010336	tsr1	99	53.423	ENSG00000167721	TSR1	99	53.121	Homo_sapiens
ENSGMOG00000010336	tsr1	100	72.877	ENSAPOG00000020891	tsr1	100	73.540	Acanthochromis_polyacanthus
ENSGMOG00000010336	tsr1	99	52.232	ENSAMEG00000007599	TSR1	99	51.387	Ailuropoda_melanoleuca
ENSGMOG00000010336	tsr1	100	73.472	ENSACIG00000007090	tsr1	100	73.382	Amphilophus_citrinellus
ENSGMOG00000010336	tsr1	100	73.892	ENSAOCG00000023284	tsr1	100	74.731	Amphiprion_ocellaris
ENSGMOG00000010336	tsr1	93	72.879	ENSAPEG00000008452	tsr1	100	73.779	Amphiprion_percula
ENSGMOG00000010336	tsr1	100	72.295	ENSATEG00000021961	tsr1	100	70.392	Anabas_testudineus
ENSGMOG00000010336	tsr1	90	57.008	ENSAPLG00000013422	TSR1	98	57.182	Anas_platyrhynchos
ENSGMOG00000010336	tsr1	70	47.684	ENSACAG00000000859	TSR1	92	46.564	Anolis_carolinensis
ENSGMOG00000010336	tsr1	99	53.968	ENSANAG00000031071	TSR1	99	52.999	Aotus_nancymaae
ENSGMOG00000010336	tsr1	100	74.101	ENSACLG00000007595	tsr1	99	73.317	Astatotilapia_calliptera
ENSGMOG00000010336	tsr1	51	68.646	ENSAMXG00000008470	tsr1	88	68.646	Astyanax_mexicanus
ENSGMOG00000010336	tsr1	99	54.501	ENSBTAG00000004225	TSR1	99	53.602	Bos_taurus
ENSGMOG00000010336	tsr1	96	37.905	WBGene00006497	tag-151	96	38.077	Caenorhabditis_elegans
ENSGMOG00000010336	tsr1	99	52.876	ENSCJAG00000012456	TSR1	99	52.264	Callithrix_jacchus
ENSGMOG00000010336	tsr1	89	51.012	ENSCAFG00000019273	-	100	53.453	Canis_familiaris
ENSGMOG00000010336	tsr1	99	52.991	ENSCAFG00000002106	-	99	52.142	Canis_familiaris
ENSGMOG00000010336	tsr1	99	52.754	ENSCAFG00020009728	TSR1	99	52.020	Canis_lupus_dingo
ENSGMOG00000010336	tsr1	99	54.645	ENSCHIG00000023935	TSR1	99	53.742	Capra_hircus
ENSGMOG00000010336	tsr1	99	54.100	ENSTSYG00000005468	TSR1	99	53.554	Carlito_syrichta
ENSGMOG00000010336	tsr1	92	53.377	ENSCPOG00000014833	TSR1	99	52.848	Cavia_porcellus
ENSGMOG00000010336	tsr1	92	52.825	ENSCCAG00000028962	TSR1	98	51.779	Cebus_capucinus
ENSGMOG00000010336	tsr1	99	53.114	ENSCATG00000044262	TSR1	99	52.184	Cercocebus_atys
ENSGMOG00000010336	tsr1	99	53.667	ENSCLAG00000005567	TSR1	99	52.567	Chinchilla_lanigera
ENSGMOG00000010336	tsr1	99	53.350	ENSCSAG00000013788	TSR1	99	52.421	Chlorocebus_sabaeus
ENSGMOG00000010336	tsr1	98	55.501	ENSCPBG00000020363	TSR1	98	55.273	Chrysemys_picta_bellii
ENSGMOG00000010336	tsr1	96	45.500	ENSCING00000020658	-	99	44.862	Ciona_intestinalis
ENSGMOG00000010336	tsr1	96	43.213	ENSCSAVG00000001875	-	100	42.875	Ciona_savignyi
ENSGMOG00000010336	tsr1	98	51.806	ENSCANG00000033056	TSR1	99	50.311	Colobus_angolensis_palliatus
ENSGMOG00000010336	tsr1	99	53.431	ENSCGRG00001023942	Tsr1	99	52.451	Cricetulus_griseus_chok1gshd
ENSGMOG00000010336	tsr1	99	50.801	ENSCGRG00000013015	Tsr1	97	63.897	Cricetulus_griseus_crigri
ENSGMOG00000010336	tsr1	100	69.581	ENSCSEG00000013009	tsr1	100	70.504	Cynoglossus_semilaevis
ENSGMOG00000010336	tsr1	100	72.957	ENSCVAG00000000506	tsr1	100	72.957	Cyprinodon_variegatus
ENSGMOG00000010336	tsr1	99	70.084	ENSDARG00000007744	tsr1	99	69.843	Danio_rerio
ENSGMOG00000010336	tsr1	99	54.233	ENSDNOG00000004715	TSR1	99	54.638	Dasypus_novemcinctus
ENSGMOG00000010336	tsr1	99	54.034	ENSDORG00000016371	-	99	53.676	Dipodomys_ordii
ENSGMOG00000010336	tsr1	96	48.035	ENSDORG00000023234	-	99	46.667	Dipodomys_ordii
ENSGMOG00000010336	tsr1	96	43.173	FBgn0037073	Tsr1	96	41.328	Drosophila_melanogaster
ENSGMOG00000010336	tsr1	89	66.230	ENSETEG00000017534	TSR1	89	64.918	Echinops_telfairi
ENSGMOG00000010336	tsr1	95	49.431	ENSEBUG00000013731	TSR1	98	48.416	Eptatretus_burgeri
ENSGMOG00000010336	tsr1	99	53.733	ENSEASG00005009302	TSR1	97	53.064	Equus_asinus_asinus
ENSGMOG00000010336	tsr1	99	53.317	ENSECAG00000009114	TSR1	99	53.064	Equus_caballus
ENSGMOG00000010336	tsr1	100	70.248	ENSELUG00000020984	tsr1	96	70.251	Esox_lucius
ENSGMOG00000010336	tsr1	99	53.260	ENSFCAG00000006313	TSR1	99	52.761	Felis_catus
ENSGMOG00000010336	tsr1	99	55.134	ENSFALG00000006532	TSR1	98	55.143	Ficedula_albicollis
ENSGMOG00000010336	tsr1	99	53.440	ENSFDAG00000006038	TSR1	99	52.709	Fukomys_damarensis
ENSGMOG00000010336	tsr1	100	71.514	ENSFHEG00000003626	tsr1	99	71.514	Fundulus_heteroclitus
ENSGMOG00000010336	tsr1	100	71.976	ENSGAFG00000012993	tsr1	99	70.813	Gambusia_affinis
ENSGMOG00000010336	tsr1	100	74.909	ENSGACG00000010843	tsr1	100	74.909	Gasterosteus_aculeatus
ENSGMOG00000010336	tsr1	98	54.691	ENSGAGG00000025619	-	99	54.156	Gopherus_agassizii
ENSGMOG00000010336	tsr1	99	53.846	ENSGGOG00000001704	TSR1	99	53.366	Gorilla_gorilla
ENSGMOG00000010336	tsr1	100	73.293	ENSHBUG00000017904	tsr1	100	72.494	Haplochromis_burtoni
ENSGMOG00000010336	tsr1	99	53.309	ENSHGLG00000012806	-	99	52.580	Heterocephalus_glaber_female
ENSGMOG00000010336	tsr1	96	47.268	ENSHGLG00000015688	-	98	46.752	Heterocephalus_glaber_female
ENSGMOG00000010336	tsr1	99	53.309	ENSHGLG00100015392	TSR1	99	52.580	Heterocephalus_glaber_male
ENSGMOG00000010336	tsr1	100	72.426	ENSHCOG00000001432	tsr1	100	72.304	Hippocampus_comes
ENSGMOG00000010336	tsr1	100	67.703	ENSIPUG00000004618	tsr1	100	68.301	Ictalurus_punctatus
ENSGMOG00000010336	tsr1	99	54.090	ENSSTOG00000011819	TSR1	99	53.244	Ictidomys_tridecemlineatus
ENSGMOG00000010336	tsr1	90	52.156	ENSJJAG00000019505	Tsr1	94	51.486	Jaculus_jaculus
ENSGMOG00000010336	tsr1	100	72.542	ENSKMAG00000005763	tsr1	99	71.856	Kryptolebias_marmoratus
ENSGMOG00000010336	tsr1	100	73.421	ENSLBEG00000021823	tsr1	99	73.540	Labrus_bergylta
ENSGMOG00000010336	tsr1	100	54.900	ENSLACG00000002197	TSR1	100	54.773	Latimeria_chalumnae
ENSGMOG00000010336	tsr1	90	70.667	ENSLOCG00000006491	TSR1	98	70.667	Lepisosteus_oculatus
ENSGMOG00000010336	tsr1	99	53.358	ENSMFAG00000021330	TSR1	99	52.427	Macaca_fascicularis
ENSGMOG00000010336	tsr1	99	53.236	ENSMMUG00000017519	TSR1	99	52.306	Macaca_mulatta
ENSGMOG00000010336	tsr1	99	53.236	ENSMNEG00000031382	TSR1	99	52.306	Macaca_nemestrina
ENSGMOG00000010336	tsr1	99	52.991	ENSMLEG00000036733	TSR1	99	52.063	Mandrillus_leucophaeus
ENSGMOG00000010336	tsr1	100	71.886	ENSMAMG00000017918	tsr1	99	72.479	Mastacembelus_armatus
ENSGMOG00000010336	tsr1	100	73.741	ENSMZEG00005007477	tsr1	100	73.229	Maylandia_zebra
ENSGMOG00000010336	tsr1	99	54.866	ENSMGAG00000005576	TSR1	99	54.146	Meleagris_gallopavo
ENSGMOG00000010336	tsr1	99	54.945	ENSMICG00000012943	TSR1	99	54.523	Microcebus_murinus
ENSGMOG00000010336	tsr1	99	52.387	ENSMOCG00000022764	Tsr1	99	52.200	Microtus_ochrogaster
ENSGMOG00000010336	tsr1	100	71.344	ENSMMOG00000014280	tsr1	100	72.826	Mola_mola
ENSGMOG00000010336	tsr1	98	54.523	ENSMODG00000010658	TSR1	99	54.703	Monodelphis_domestica
ENSGMOG00000010336	tsr1	100	72.076	ENSMALG00000011681	tsr1	100	72.196	Monopterus_albus
ENSGMOG00000010336	tsr1	99	53.650	MGP_CAROLIEiJ_G0016727	Tsr1	99	52.561	Mus_caroli
ENSGMOG00000010336	tsr1	99	54.258	ENSMUSG00000038335	Tsr1	99	53.171	Mus_musculus
ENSGMOG00000010336	tsr1	99	54.024	MGP_PahariEiJ_G0017864	Tsr1	99	52.934	Mus_pahari
ENSGMOG00000010336	tsr1	99	54.136	MGP_SPRETEiJ_G0017570	Tsr1	99	53.049	Mus_spretus
ENSGMOG00000010336	tsr1	81	54.737	ENSMPUG00000013000	TSR1	100	53.835	Mustela_putorius_furo
ENSGMOG00000010336	tsr1	98	55.198	ENSMLUG00000003505	TSR1	99	54.647	Myotis_lucifugus
ENSGMOG00000010336	tsr1	100	73.325	ENSNBRG00000020728	tsr1	99	72.608	Neolamprologus_brichardi
ENSGMOG00000010336	tsr1	99	50.864	ENSNLEG00000017184	TSR1	99	50.739	Nomascus_leucogenys
ENSGMOG00000010336	tsr1	99	50.426	ENSMEUG00000015828	TSR1	99	50.061	Notamacropus_eugenii
ENSGMOG00000010336	tsr1	100	73.285	ENSONIG00000013131	tsr1	100	73.551	Oreochromis_niloticus
ENSGMOG00000010336	tsr1	95	53.553	ENSOANG00000008637	TSR1	100	53.797	Ornithorhynchus_anatinus
ENSGMOG00000010336	tsr1	99	54.468	ENSOCUG00000014256	TSR1	99	53.676	Oryctolagus_cuniculus
ENSGMOG00000010336	tsr1	100	72.129	ENSORLG00000004926	tsr1	99	70.694	Oryzias_latipes
ENSGMOG00000010336	tsr1	100	71.856	ENSORLG00020008792	tsr1	99	71.018	Oryzias_latipes_hni
ENSGMOG00000010336	tsr1	100	72.249	ENSORLG00015013838	tsr1	99	70.813	Oryzias_latipes_hsok
ENSGMOG00000010336	tsr1	100	71.770	ENSOMEG00000004830	tsr1	99	73.206	Oryzias_melastigma
ENSGMOG00000010336	tsr1	99	53.762	ENSOGAG00000004492	TSR1	99	53.511	Otolemur_garnettii
ENSGMOG00000010336	tsr1	99	54.701	ENSOARG00000015437	TSR1	97	53.799	Ovis_aries
ENSGMOG00000010336	tsr1	99	53.423	ENSPPAG00000036355	TSR1	99	53.121	Pan_paniscus
ENSGMOG00000010336	tsr1	99	53.014	ENSPPRG00000015519	-	99	52.515	Panthera_pardus
ENSGMOG00000010336	tsr1	99	53.137	ENSPTIG00000010608	TSR1	99	52.638	Panthera_tigris_altaica
ENSGMOG00000010336	tsr1	99	53.423	ENSPTRG00000008547	TSR1	99	53.121	Pan_troglodytes
ENSGMOG00000010336	tsr1	99	51.157	ENSPANG00000024463	TSR1	99	50.304	Papio_anubis
ENSGMOG00000010336	tsr1	100	68.864	ENSPKIG00000013972	tsr1	100	68.171	Paramormyrops_kingsleyae
ENSGMOG00000010336	tsr1	87	54.685	ENSPSIG00000018258	TSR1	99	54.114	Pelodiscus_sinensis
ENSGMOG00000010336	tsr1	99	73.082	ENSPMGG00000011577	tsr1	99	72.683	Periophthalmus_magnuspinnatus
ENSGMOG00000010336	tsr1	99	52.683	ENSPEMG00000018033	Tsr1	99	51.341	Peromyscus_maniculatus_bairdii
ENSGMOG00000010336	tsr1	99	54.878	ENSPCIG00000009357	TSR1	97	54.390	Phascolarctos_cinereus
ENSGMOG00000010336	tsr1	100	71.566	ENSPFOG00000004483	TSR1	100	72.169	Poecilia_formosa
ENSGMOG00000010336	tsr1	100	72.127	ENSPLAG00000022320	tsr1	100	72.616	Poecilia_latipinna
ENSGMOG00000010336	tsr1	100	72.143	ENSPMEG00000004577	tsr1	99	70.952	Poecilia_mexicana
ENSGMOG00000010336	tsr1	97	71.936	ENSPREG00000010354	tsr1	96	71.027	Poecilia_reticulata
ENSGMOG00000010336	tsr1	99	48.721	ENSPPYG00000007792	TSR1	99	48.063	Pongo_abelii
ENSGMOG00000010336	tsr1	53	65.116	ENSPCAG00000012973	-	70	64.865	Procavia_capensis
ENSGMOG00000010336	tsr1	99	54.310	ENSPCOG00000017928	TSR1	99	53.931	Propithecus_coquereli
ENSGMOG00000010336	tsr1	99	53.309	ENSPVAG00000002162	TSR1	99	52.457	Pteropus_vampyrus
ENSGMOG00000010336	tsr1	100	74.221	ENSPNYG00000016163	tsr1	99	73.438	Pundamilia_nyererei
ENSGMOG00000010336	tsr1	100	68.929	ENSPNAG00000008659	tsr1	100	69.194	Pygocentrus_nattereri
ENSGMOG00000010336	tsr1	99	53.301	ENSRNOG00000002980	Tsr1	99	52.812	Rattus_norvegicus
ENSGMOG00000010336	tsr1	99	53.837	ENSRBIG00000040016	TSR1	99	52.549	Rhinopithecus_bieti
ENSGMOG00000010336	tsr1	99	53.358	ENSRROG00000030361	TSR1	99	52.427	Rhinopithecus_roxellana
ENSGMOG00000010336	tsr1	99	53.602	ENSSBOG00000020785	TSR1	99	52.509	Saimiri_boliviensis_boliviensis
ENSGMOG00000010336	tsr1	99	55.202	ENSSHAG00000011394	TSR1	99	55.215	Sarcophilus_harrisii
ENSGMOG00000010336	tsr1	100	70.652	ENSSFOG00015005455	tsr1	100	70.652	Scleropages_formosus
ENSGMOG00000010336	tsr1	100	73.508	ENSSMAG00000009504	tsr1	100	72.792	Scophthalmus_maximus
ENSGMOG00000010336	tsr1	100	73.540	ENSSDUG00000012074	tsr1	99	74.374	Seriola_dumerili
ENSGMOG00000010336	tsr1	100	72.879	ENSSLDG00000002031	tsr1	99	74.552	Seriola_lalandi_dorsalis
ENSGMOG00000010336	tsr1	92	55.378	ENSSARG00000000759	TSR1	93	55.378	Sorex_araneus
ENSGMOG00000010336	tsr1	99	54.976	ENSSPUG00000007042	TSR1	99	55.990	Sphenodon_punctatus
ENSGMOG00000010336	tsr1	100	74.136	ENSSPAG00000021951	tsr1	100	73.302	Stegastes_partitus
ENSGMOG00000010336	tsr1	99	53.856	ENSSSCG00000038534	TSR1	99	53.309	Sus_scrofa
ENSGMOG00000010336	tsr1	90	57.838	ENSTGUG00000005883	TSR1	100	56.969	Taeniopygia_guttata
ENSGMOG00000010336	tsr1	100	72.289	ENSTRUG00000004665	tsr1	100	72.323	Takifugu_rubripes
ENSGMOG00000010336	tsr1	99	73.333	ENSTNIG00000016196	tsr1	100	73.951	Tetraodon_nigroviridis
ENSGMOG00000010336	tsr1	66	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSGMOG00000010336	tsr1	99	54.823	ENSTTRG00000001177	TSR1	99	53.922	Tursiops_truncatus
ENSGMOG00000010336	tsr1	99	52.457	ENSUAMG00000025160	TSR1	99	52.088	Ursus_americanus
ENSGMOG00000010336	tsr1	95	52.845	ENSUMAG00000009294	TSR1	98	52.465	Ursus_maritimus
ENSGMOG00000010336	tsr1	83	48.988	ENSVPAG00000000228	TSR1	99	46.915	Vicugna_pacos
ENSGMOG00000010336	tsr1	99	52.625	ENSVVUG00000021767	TSR1	99	51.775	Vulpes_vulpes
ENSGMOG00000010336	tsr1	100	48.982	ENSXETG00000023797	tsr1	100	49.102	Xenopus_tropicalis
ENSGMOG00000010336	tsr1	100	72.087	ENSXCOG00000009635	tsr1	100	71.879	Xiphophorus_couchianus
ENSGMOG00000010336	tsr1	100	71.856	ENSXMAG00000001397	tsr1	97	72.368	Xiphophorus_maculatus