EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGMOG00000010382 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
37645 bases
Position
chrGeneScaffold_1511:459884-497528
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000011113tRNA_anti-codonPF01336.255.4e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000011414-1722-ENSGMOP00000011113573 (aa)-UPI00023F1F07
Gene Model
Click here to download ENSGMOG00000010382's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000010382's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000010382rpa19975.839ENSAPOG00000011658rpa19978.276Acanthochromis_polyacanthus
ENSGMOG00000010382rpa19767.574ENSAPOG00000019409RPA18567.574Acanthochromis_polyacanthus
ENSGMOG00000010382rpa19958.429ENSAMEG00000007706RPA19958.429Ailuropoda_melanoleuca
ENSGMOG00000010382rpa19560.477ENSACIG00000012881RPA19960.477Amphilophus_citrinellus
ENSGMOG00000010382rpa19667.596ENSACIG00000007277rpa19967.596Amphilophus_citrinellus
ENSGMOG00000010382rpa19976.047ENSAOCG00000023376rpa19977.778Amphiprion_ocellaris
ENSGMOG00000010382rpa19868.409ENSAOCG00000009003RPA19068.409Amphiprion_ocellaris
ENSGMOG00000010382rpa19976.382ENSAPEG00000008634rpa19978.036Amphiprion_percula
ENSGMOG00000010382rpa19868.864ENSAPEG00000019132RPA18868.864Amphiprion_percula
ENSGMOG00000010382rpa19578.153ENSATEG00000022024rpa19978.153Anabas_testudineus
ENSGMOG00000010382rpa19970.833ENSATEG00000006443RPA18870.833Anabas_testudineus
ENSGMOG00000010382rpa19651.807ENSAPLG00000012442RPA19952.259Anas_platyrhynchos
ENSGMOG00000010382rpa19955.629ENSACAG00000014490RPA19956.711Anolis_carolinensis
ENSGMOG00000010382rpa19663.393ENSANAG00000023456RPA19863.393Aotus_nancymaae
ENSGMOG00000010382rpa19959.685ENSACLG00000005223RPA19959.685Astatotilapia_calliptera
ENSGMOG00000010382rpa19379.024ENSACLG00000006640rpa19979.024Astatotilapia_calliptera
ENSGMOG00000010382rpa19677.034ENSAMXG00000008418rpa19977.034Astyanax_mexicanus
ENSGMOG00000010382rpa19958.033ENSBTAG00000009711RPA19958.033Bos_taurus
ENSGMOG00000010382rpa18431.953WBGene00017546rpa-17232.353Caenorhabditis_elegans
ENSGMOG00000010382rpa19958.795ENSCJAG00000001848RPA19958.795Callithrix_jacchus
ENSGMOG00000010382rpa19959.247ENSCAFG00000019249RPA19959.411Canis_familiaris
ENSGMOG00000010382rpa19959.247ENSCAFG00020009847RPA19959.411Canis_lupus_dingo
ENSGMOG00000010382rpa19958.525ENSCHIG00000026308RPA19958.525Capra_hircus
ENSGMOG00000010382rpa19959.217ENSTSYG00000003482-9959.217Carlito_syrichta
ENSGMOG00000010382rpa19958.756ENSCPOG00000000035RPA19958.756Cavia_porcellus
ENSGMOG00000010382rpa19948.534ENSCCAG00000010981RPA19948.534Cebus_capucinus
ENSGMOG00000010382rpa19955.008ENSCLAG00000015045-9955.008Chinchilla_lanigera
ENSGMOG00000010382rpa19958.429ENSCLAG00000005185-9958.429Chinchilla_lanigera
ENSGMOG00000010382rpa19949.427ENSCSAG00000013833RPA19949.427Chlorocebus_sabaeus
ENSGMOG00000010382rpa17667.963ENSCHOG00000009454-9967.963Choloepus_hoffmanni
ENSGMOG00000010382rpa19558.092ENSCHOG00000013540-9958.092Choloepus_hoffmanni
ENSGMOG00000010382rpa110059.967ENSCPBG00000020377RPA19961.687Chrysemys_picta_bellii
ENSGMOG00000010382rpa19941.791ENSCING00000023482-9941.791Ciona_intestinalis
ENSGMOG00000010382rpa19664.107ENSCANG00000030911RPA19864.107Colobus_angolensis_palliatus
ENSGMOG00000010382rpa19959.054ENSCGRG00001008197Rpa19959.054Cricetulus_griseus_chok1gshd
ENSGMOG00000010382rpa18167.024ENSCGRG00000000582Rpa19167.024Cricetulus_griseus_crigri
ENSGMOG00000010382rpa19953.440ENSCSEG00000012726RPA19954.733Cynoglossus_semilaevis
ENSGMOG00000010382rpa19972.712ENSCSEG00000013066rpa19972.712Cynoglossus_semilaevis
ENSGMOG00000010382rpa19974.709ENSCVAG00000019431rpa19976.895Cyprinodon_variegatus
ENSGMOG00000010382rpa19369.544ENSCVAG00000013446-7969.544Cyprinodon_variegatus
ENSGMOG00000010382rpa19971.285ENSDARG00000003938rpa19971.285Danio_rerio
ENSGMOG00000010382rpa19660.135ENSDNOG00000017218RPA19660.135Dasypus_novemcinctus
ENSGMOG00000010382rpa19959.641ENSDORG00000006199Rpa19959.804Dipodomys_ordii
ENSGMOG00000010382rpa19943.074FBgn0010173RpA-709843.750Drosophila_melanogaster
ENSGMOG00000010382rpa18275.510ENSETEG00000017608RPA18275.510Echinops_telfairi
ENSGMOG00000010382rpa19861.646ENSEASG00005009372RPA19962.862Equus_asinus_asinus
ENSGMOG00000010382rpa19958.592ENSECAG00000023886RPA19958.756Equus_caballus
ENSGMOG00000010382rpa17268.660ENSEEUG00000002186-6868.660Erinaceus_europaeus
ENSGMOG00000010382rpa19976.783ENSELUG00000021071rpa19976.783Esox_lucius
ENSGMOG00000010382rpa18863.743ENSELUG00000006136RPA19965.020Esox_lucius
ENSGMOG00000010382rpa19958.170ENSFCAG00000006306RPA19958.170Felis_catus
ENSGMOG00000010382rpa19959.344ENSFALG00000006575RPA19959.344Ficedula_albicollis
ENSGMOG00000010382rpa19958.756ENSFDAG00000007720RPA19958.756Fukomys_damarensis
ENSGMOG00000010382rpa19975.292ENSFHEG00000003580rpa19975.292Fundulus_heteroclitus
ENSGMOG00000010382rpa19958.033ENSGALG00000003072RPA19958.033Gallus_gallus
ENSGMOG00000010382rpa19668.650ENSGAFG00000020953RPA18468.650Gambusia_affinis
ENSGMOG00000010382rpa19975.336ENSGAFG00000012916rpa19975.336Gambusia_affinis
ENSGMOG00000010382rpa19976.087ENSGACG00000010856rpa19976.087Gasterosteus_aculeatus
ENSGMOG00000010382rpa110059.804ENSGAGG00000013611RPA19959.804Gopherus_agassizii
ENSGMOG00000010382rpa19962.306ENSGGOG00000014186RPA19962.306Gorilla_gorilla
ENSGMOG00000010382rpa19976.717ENSHBUG00000017773rpa19976.717Haplochromis_burtoni
ENSGMOG00000010382rpa19558.304ENSHBUG00000009348RPA19858.304Haplochromis_burtoni
ENSGMOG00000010382rpa19958.429ENSHGLG00000008846RPA19958.429Heterocephalus_glaber_female
ENSGMOG00000010382rpa19954.902ENSHGLG00100000799-9954.902Heterocephalus_glaber_male
ENSGMOG00000010382rpa19950.245ENSHGLG00100002005-9950.245Heterocephalus_glaber_male
ENSGMOG00000010382rpa19958.429ENSHGLG00100017755-9958.429Heterocephalus_glaber_male
ENSGMOG00000010382rpa19968.144ENSHCOG00000001401rpa19967.980Hippocampus_comes
ENSGMOG00000010382rpa19945.517ENSHCOG00000000351RPA19945.517Hippocampus_comes
ENSGMOG00000010382rpa19972.968ENSIPUG00000004400rpa19972.968Ictalurus_punctatus
ENSGMOG00000010382rpa19556.706ENSSTOG00000022475RPA19856.706Ictidomys_tridecemlineatus
ENSGMOG00000010382rpa19659.694ENSJJAG00000000876Rpa19859.694Jaculus_jaculus
ENSGMOG00000010382rpa19958.472ENSKMAG00000000234RPA19958.472Kryptolebias_marmoratus
ENSGMOG00000010382rpa19971.993ENSKMAG00000005605rpa19972.158Kryptolebias_marmoratus
ENSGMOG00000010382rpa19978.472ENSLBEG00000021604rpa19978.472Labrus_bergylta
ENSGMOG00000010382rpa19767.955ENSLBEG00000002281RPA17967.955Labrus_bergylta
ENSGMOG00000010382rpa18260.460ENSLACG00000007210RPA19760.460Latimeria_chalumnae
ENSGMOG00000010382rpa19967.110ENSLOCG00000006397rpa19967.276Lepisosteus_oculatus
ENSGMOG00000010382rpa19957.581ENSLAFG00000015354RPA19957.581Loxodonta_africana
ENSGMOG00000010382rpa17956.883ENSMFAG00000036138-9856.883Macaca_fascicularis
ENSGMOG00000010382rpa19954.950ENSMMUG00000002442-9954.950Macaca_mulatta
ENSGMOG00000010382rpa19959.406ENSMMUG00000011604-9959.406Macaca_mulatta
ENSGMOG00000010382rpa19958.689ENSMNEG00000031632-9958.689Macaca_nemestrina
ENSGMOG00000010382rpa19956.153ENSMNEG00000029837-9956.153Macaca_nemestrina
ENSGMOG00000010382rpa19657.407ENSMLEG00000038768-9857.407Mandrillus_leucophaeus
ENSGMOG00000010382rpa19969.302ENSMAMG00000020097RPA18768.650Mastacembelus_armatus
ENSGMOG00000010382rpa19977.013ENSMAMG00000017993rpa19981.516Mastacembelus_armatus
ENSGMOG00000010382rpa19976.717ENSMZEG00005007551rpa19976.717Maylandia_zebra
ENSGMOG00000010382rpa19959.685ENSMZEG00005024731RPA19959.685Maylandia_zebra
ENSGMOG00000010382rpa19956.486ENSMGAG00000005315RPA19956.486Meleagris_gallopavo
ENSGMOG00000010382rpa19660.102ENSMAUG00000010474Rpa19860.102Mesocricetus_auratus
ENSGMOG00000010382rpa19959.477ENSMICG00000012867RPA19959.477Microcebus_murinus
ENSGMOG00000010382rpa19958.882ENSMOCG00000013019Rpa19958.882Microtus_ochrogaster
ENSGMOG00000010382rpa19861.775ENSMMOG00000010868RPA19861.775Mola_mola
ENSGMOG00000010382rpa19975.336ENSMMOG00000014292rpa19976.990Mola_mola
ENSGMOG00000010382rpa19959.574ENSMODG00000010549RPA19959.574Monodelphis_domestica
ENSGMOG00000010382rpa19977.403ENSMALG00000011453rpa19977.403Monopterus_albus
ENSGMOG00000010382rpa19964.842ENSMALG00000001208RPA18264.842Monopterus_albus
ENSGMOG00000010382rpa19959.150MGP_CAROLIEiJ_G0016734Rpa19959.150Mus_caroli
ENSGMOG00000010382rpa19958.671ENSMUSG00000000751Rpa19958.671Mus_musculus
ENSGMOG00000010382rpa19958.795MGP_PahariEiJ_G0017871Rpa19958.795Mus_pahari
ENSGMOG00000010382rpa19958.738MGP_SPRETEiJ_G0017577Rpa19958.738Mus_spretus
ENSGMOG00000010382rpa19958.265ENSMPUG00000013119RPA19958.265Mustela_putorius_furo
ENSGMOG00000010382rpa19958.643ENSMLUG00000006113RPA19958.643Myotis_lucifugus
ENSGMOG00000010382rpa19759.167ENSNGAG00000004522Rpa19659.167Nannospalax_galili
ENSGMOG00000010382rpa19478.393ENSNBRG00000020595rpa19978.393Neolamprologus_brichardi
ENSGMOG00000010382rpa19859.291ENSNBRG00000009672RPA19759.122Neolamprologus_brichardi
ENSGMOG00000010382rpa19958.987ENSNLEG00000017149RPA19958.987Nomascus_leucogenys
ENSGMOG00000010382rpa19652.712ENSMEUG00000006714RPA19752.712Notamacropus_eugenii
ENSGMOG00000010382rpa19658.626ENSODEG00000009038RPA19658.459Octodon_degus
ENSGMOG00000010382rpa19975.369ENSONIG00000013135rpa19975.369Oreochromis_niloticus
ENSGMOG00000010382rpa19760.000ENSOANG00000010880RPA19960.100Ornithorhynchus_anatinus
ENSGMOG00000010382rpa19956.875ENSOCUG00000001504RPA19956.875Oryctolagus_cuniculus
ENSGMOG00000010382rpa19976.846ENSORLG00000004856rpa19976.846Oryzias_latipes
ENSGMOG00000010382rpa19964.496ENSORLG00000003368RPA19464.632Oryzias_latipes
ENSGMOG00000010382rpa19977.013ENSORLG00020008980rpa19977.013Oryzias_latipes_hni
ENSGMOG00000010382rpa19963.713ENSORLG00020015284RPA19263.848Oryzias_latipes_hni
ENSGMOG00000010382rpa19956.006ENSORLG00015020383RPA19266.143Oryzias_latipes_hsok
ENSGMOG00000010382rpa17265.942ENSORLG00015005867-9565.942Oryzias_latipes_hsok
ENSGMOG00000010382rpa19977.013ENSORLG00015013982rpa19977.013Oryzias_latipes_hsok
ENSGMOG00000010382rpa19558.627ENSOMEG00000011040RPA19958.627Oryzias_melastigma
ENSGMOG00000010382rpa19973.658ENSOMEG00000004704rpa19973.658Oryzias_melastigma
ENSGMOG00000010382rpa19958.660ENSOGAG00000005581-9958.660Otolemur_garnettii
ENSGMOG00000010382rpa17476.374ENSOGAG00000029379-9876.374Otolemur_garnettii
ENSGMOG00000010382rpa19958.525ENSOARG00000014479RPA19958.525Ovis_aries
ENSGMOG00000010382rpa19959.150ENSPPAG00000039680RPA19959.150Pan_paniscus
ENSGMOG00000010382rpa19958.007ENSPPRG00000011807RPA19958.007Panthera_pardus
ENSGMOG00000010382rpa19958.007ENSPTIG00000007898RPA19958.007Panthera_tigris_altaica
ENSGMOG00000010382rpa19959.150ENSPTRG00000008539RPA19959.150Pan_troglodytes
ENSGMOG00000010382rpa19959.574ENSPANG00000024592RPA19959.574Papio_anubis
ENSGMOG00000010382rpa19970.675ENSPKIG00000008053rpa19970.675Paramormyrops_kingsleyae
ENSGMOG00000010382rpa19661.083ENSPSIG00000015617RPA19861.083Pelodiscus_sinensis
ENSGMOG00000010382rpa19960.274ENSPMGG00000000543RPA19961.622Periophthalmus_magnuspinnatus
ENSGMOG00000010382rpa19976.592ENSPMGG00000011589rpa19976.592Periophthalmus_magnuspinnatus
ENSGMOG00000010382rpa19959.375ENSPEMG00000021061Rpa19959.375Peromyscus_maniculatus_bairdii
ENSGMOG00000010382rpa19960.131ENSPCIG00000019049RPA19960.458Phascolarctos_cinereus
ENSGMOG00000010382rpa19976.174ENSPFOG00000003987rpa19976.174Poecilia_formosa
ENSGMOG00000010382rpa19976.342ENSPLAG00000004984rpa19976.342Poecilia_latipinna
ENSGMOG00000010382rpa19168.873ENSPLAG00000008844-8268.873Poecilia_latipinna
ENSGMOG00000010382rpa19976.174ENSPMEG00000020602rpa19976.786Poecilia_mexicana
ENSGMOG00000010382rpa19168.627ENSPMEG00000003627-8268.889Poecilia_mexicana
ENSGMOG00000010382rpa19769.794ENSPREG00000010119RPA18369.794Poecilia_reticulata
ENSGMOG00000010382rpa19367.921ENSPREG00000010174rpa19667.321Poecilia_reticulata
ENSGMOG00000010382rpa19959.314ENSPCOG00000001799RPA19959.314Propithecus_coquereli
ENSGMOG00000010382rpa110058.143ENSPVAG00000002149RPA19958.143Pteropus_vampyrus
ENSGMOG00000010382rpa19959.528ENSPNYG00000024165RPA19959.528Pundamilia_nyererei
ENSGMOG00000010382rpa19976.884ENSPNYG00000016316rpa19978.919Pundamilia_nyererei
ENSGMOG00000010382rpa19965.424ENSPNAG00000008599rpa19963.502Pygocentrus_nattereri
ENSGMOG00000010382rpa19670.388ENSRNOG00000003123Rpa19959.704Rattus_norvegicus
ENSGMOG00000010382rpa19959.247ENSRBIG00000036587RPA19959.247Rhinopithecus_bieti
ENSGMOG00000010382rpa19954.337ENSRROG00000043278RPA19954.337Rhinopithecus_roxellana
ENSGMOG00000010382rpa19160.465ENSSBOG00000030233RPA19760.465Saimiri_boliviensis_boliviensis
ENSGMOG00000010382rpa19959.672ENSSHAG00000007969RPA19859.672Sarcophilus_harrisii
ENSGMOG00000010382rpa19974.833ENSSFOG00015005362rpa19274.833Scleropages_formosus
ENSGMOG00000010382rpa19969.545ENSSMAG00000019746RPA18969.545Scophthalmus_maximus
ENSGMOG00000010382rpa19966.596ENSSDUG00000016358RPA19166.247Seriola_dumerili
ENSGMOG00000010382rpa19978.356ENSSDUG00000011949rpa19978.356Seriola_dumerili
ENSGMOG00000010382rpa19978.356ENSSLDG00000011806rpa19978.356Seriola_lalandi_dorsalis
ENSGMOG00000010382rpa19966.109ENSSLDG00000020784RPA19066.457Seriola_lalandi_dorsalis
ENSGMOG00000010382rpa19647.966ENSSARG00000007506RPA19847.966Sorex_araneus
ENSGMOG00000010382rpa19858.992ENSSPUG00000007223RPA19959.091Sphenodon_punctatus
ENSGMOG00000010382rpa19861.092ENSSPAG00000011165RPA19861.092Stegastes_partitus
ENSGMOG00000010382rpa19975.671ENSSPAG00000009903rpa19975.671Stegastes_partitus
ENSGMOG00000010382rpa19961.485ENSSSCG00000017822RPA19961.485Sus_scrofa
ENSGMOG00000010382rpa19959.046ENSTGUG00000005775RPA19959.046Taeniopygia_guttata
ENSGMOG00000010382rpa19867.523ENSTRUG00000000405RPA18463.866Takifugu_rubripes
ENSGMOG00000010382rpa19973.490ENSTRUG00000003616rpa19973.490Takifugu_rubripes
ENSGMOG00000010382rpa19974.587ENSTNIG00000016199rpa19974.587Tetraodon_nigroviridis
ENSGMOG00000010382rpa17668.793ENSTBEG00000002709RPA17368.793Tupaia_belangeri
ENSGMOG00000010382rpa19958.033ENSTTRG00000001169RPA19958.033Tursiops_truncatus
ENSGMOG00000010382rpa18571.154ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSGMOG00000010382rpa19961.790ENSUMAG00000009328RPA19961.790Ursus_maritimus
ENSGMOG00000010382rpa19957.426ENSVPAG00000009443RPA19957.426Vicugna_pacos
ENSGMOG00000010382rpa19958.920ENSVVUG00000021715RPA19959.411Vulpes_vulpes
ENSGMOG00000010382rpa19964.013ENSXETG00000013538rpa19964.511Xenopus_tropicalis
ENSGMOG00000010382rpa19375.315ENSXCOG00000010068rpa19475.315Xiphophorus_couchianus
ENSGMOG00000010382rpa19562.298ENSXCOG00000009899-9961.279Xiphophorus_couchianus
ENSGMOG00000010382rpa19975.503ENSXMAG00000004102rpa19976.302Xiphophorus_maculatus
ENSGMOG00000010382rpa19669.108ENSXMAG00000010333RPA17969.108Xiphophorus_maculatus

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