EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000010491 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 22337 bases
Position: chrGeneScaffold_1083:219539-241875
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	1	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	2	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	3	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	4	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	5	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	6	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	7	8
ENSGMOP00000011244	PUF	PF00806.19	2.1e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000011546	-	3513	-	ENSGMOP00000011244	1170 (aa)	-	UPI00023F20F0

Gene Model

Click here to download ENSGMOG00000010491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000010491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000010491	pum1	94	90.602	ENSG00000134644	PUM1	90	91.084	Homo_sapiens
ENSGMOG00000010491	pum1	100	90.614	ENSAPOG00000021632	pum1	100	90.956	Acanthochromis_polyacanthus
ENSGMOG00000010491	pum1	100	90.614	ENSAOCG00000003944	pum1	100	90.956	Amphiprion_ocellaris
ENSGMOG00000010491	pum1	100	90.614	ENSAPEG00000014550	pum1	100	90.956	Amphiprion_percula
ENSGMOG00000010491	pum1	100	90.785	ENSATEG00000016004	pum1	100	90.700	Anabas_testudineus
ENSGMOG00000010491	pum1	94	90.361	ENSANAG00000027865	PUM1	91	90.843	Aotus_nancymaae
ENSGMOG00000010491	pum1	92	90.587	ENSACLG00000019354	pum1	100	90.587	Astatotilapia_calliptera
ENSGMOG00000010491	pum1	94	91.084	ENSBTAG00000018979	PUM1	91	91.566	Bos_taurus
ENSGMOG00000010491	pum1	94	90.602	ENSCJAG00000006035	PUM1	91	91.084	Callithrix_jacchus
ENSGMOG00000010491	pum1	87	90.602	ENSCAFG00020024616	PUM1	89	91.084	Canis_lupus_dingo
ENSGMOG00000010491	pum1	94	90.602	ENSCHIG00000012952	PUM1	91	91.084	Capra_hircus
ENSGMOG00000010491	pum1	94	81.687	ENSTSYG00000008868	PUM1	91	82.169	Carlito_syrichta
ENSGMOG00000010491	pum1	100	74.587	ENSCPOG00000031613	PUM1	70	88.213	Cavia_porcellus
ENSGMOG00000010491	pum1	94	91.084	ENSCATG00000017991	PUM1	93	91.566	Cercocebus_atys
ENSGMOG00000010491	pum1	94	90.361	ENSCLAG00000007662	PUM1	91	90.843	Chinchilla_lanigera
ENSGMOG00000010491	pum1	93	64.976	ENSCHOG00000010245	PUM1	85	65.459	Choloepus_hoffmanni
ENSGMOG00000010491	pum1	94	91.325	ENSCPBG00000009288	PUM1	91	91.325	Chrysemys_picta_bellii
ENSGMOG00000010491	pum1	94	90.602	ENSCANG00000042606	PUM1	91	91.084	Colobus_angolensis_palliatus
ENSGMOG00000010491	pum1	100	74.319	ENSCGRG00001024949	Pum1	70	88.023	Cricetulus_griseus_chok1gshd
ENSGMOG00000010491	pum1	100	74.319	ENSCGRG00000014197	Pum1	70	88.023	Cricetulus_griseus_crigri
ENSGMOG00000010491	pum1	100	90.273	ENSCVAG00000007043	pum1	100	90.102	Cyprinodon_variegatus
ENSGMOG00000010491	pum1	85	90.361	ENSDORG00000001875	Pum1	90	90.843	Dipodomys_ordii
ENSGMOG00000010491	pum1	100	74.752	ENSECAG00000021369	PUM1	94	88.783	Equus_caballus
ENSGMOG00000010491	pum1	76	90.244	ENSEEUG00000003871	PUM1	74	90.687	Erinaceus_europaeus
ENSGMOG00000010491	pum1	100	85.690	ENSELUG00000002409	pum1	71	95.463	Esox_lucius
ENSGMOG00000010491	pum1	94	91.084	ENSFCAG00000010374	PUM1	91	91.566	Felis_catus
ENSGMOG00000010491	pum1	100	74.587	ENSFDAG00000011319	PUM1	70	88.023	Fukomys_damarensis
ENSGMOG00000010491	pum1	91	90.342	ENSGALG00000042598	PUM1	100	90.342	Gallus_gallus
ENSGMOG00000010491	pum1	100	90.273	ENSGAFG00000015617	pum1	90	97.831	Gambusia_affinis
ENSGMOG00000010491	pum1	99	90.660	ENSGACG00000005717	pum1	100	89.798	Gasterosteus_aculeatus
ENSGMOG00000010491	pum1	91	90.543	ENSGAGG00000001290	PUM1	100	90.543	Gopherus_agassizii
ENSGMOG00000010491	pum1	94	90.602	ENSGGOG00000011983	PUM1	91	91.084	Gorilla_gorilla
ENSGMOG00000010491	pum1	100	90.870	ENSHBUG00000018718	pum1	100	90.870	Haplochromis_burtoni
ENSGMOG00000010491	pum1	100	74.505	ENSHGLG00000013819	Pum1	70	87.833	Heterocephalus_glaber_female
ENSGMOG00000010491	pum1	100	74.505	ENSHGLG00100008621	Pum1	70	87.833	Heterocephalus_glaber_male
ENSGMOG00000010491	pum1	92	78.072	ENSIPUG00000020421	pum1	100	73.499	Ictalurus_punctatus
ENSGMOG00000010491	pum1	100	74.752	ENSSTOG00000010757	PUM1	70	88.403	Ictidomys_tridecemlineatus
ENSGMOG00000010491	pum1	100	74.752	ENSJJAG00000000530	Pum1	70	88.593	Jaculus_jaculus
ENSGMOG00000010491	pum1	94	91.084	ENSMFAG00000010291	PUM1	91	91.566	Macaca_fascicularis
ENSGMOG00000010491	pum1	94	90.602	ENSMMUG00000013520	PUM1	91	91.084	Macaca_mulatta
ENSGMOG00000010491	pum1	94	90.602	ENSMNEG00000034639	PUM1	91	91.084	Macaca_nemestrina
ENSGMOG00000010491	pum1	94	90.602	ENSMLEG00000038743	PUM1	91	91.084	Mandrillus_leucophaeus
ENSGMOG00000010491	pum1	100	90.188	ENSMAMG00000011606	pum1	100	90.614	Mastacembelus_armatus
ENSGMOG00000010491	pum1	100	90.870	ENSMZEG00005005834	pum1	100	90.870	Maylandia_zebra
ENSGMOG00000010491	pum1	100	75.557	ENSMGAG00000000724	PUM1	99	73.576	Meleagris_gallopavo
ENSGMOG00000010491	pum1	100	74.236	ENSMAUG00000022090	Pum1	70	88.403	Mesocricetus_auratus
ENSGMOG00000010491	pum1	84	89.663	ENSMICG00000012213	-	91	88.193	Microcebus_murinus
ENSGMOG00000010491	pum1	94	90.361	ENSMICG00000007713	-	91	90.843	Microcebus_murinus
ENSGMOG00000010491	pum1	100	74.566	ENSMOCG00000015463	Pum1	70	88.403	Microtus_ochrogaster
ENSGMOG00000010491	pum1	75	98.072	ENSMMOG00000019817	pum1	89	98.072	Mola_mola
ENSGMOG00000010491	pum1	85	98.795	ENSMALG00000016399	pum1	90	98.795	Monopterus_albus
ENSGMOG00000010491	pum1	100	74.175	MGP_CAROLIEiJ_G0026549	Pum1	70	87.833	Mus_caroli
ENSGMOG00000010491	pum1	100	74.175	ENSMUSG00000028580	Pum1	70	87.643	Mus_musculus
ENSGMOG00000010491	pum1	100	74.092	MGP_PahariEiJ_G0028881	Pum1	70	87.643	Mus_pahari
ENSGMOG00000010491	pum1	100	74.175	MGP_SPRETEiJ_G0027529	Pum1	70	87.643	Mus_spretus
ENSGMOG00000010491	pum1	100	74.752	ENSNGAG00000002378	Pum1	70	88.403	Nannospalax_galili
ENSGMOG00000010491	pum1	79	91.955	ENSNBRG00000010689	pum1	71	97.732	Neolamprologus_brichardi
ENSGMOG00000010491	pum1	94	87.470	ENSNLEG00000001151	PUM1	91	87.952	Nomascus_leucogenys
ENSGMOG00000010491	pum1	69	90.909	ENSMEUG00000000976	-	67	80.608	Notamacropus_eugenii
ENSGMOG00000010491	pum1	82	91.589	ENSOPRG00000001776	PUM1	75	91.589	Ochotona_princeps
ENSGMOG00000010491	pum1	100	74.587	ENSODEG00000003465	PUM1	70	88.023	Octodon_degus
ENSGMOG00000010491	pum1	83	61.732	ENSOANG00000004902	-	93	66.598	Ornithorhynchus_anatinus
ENSGMOG00000010491	pum1	100	90.646	ENSORLG00000011482	pum1	100	87.953	Oryzias_latipes
ENSGMOG00000010491	pum1	100	90.476	ENSORLG00020019461	pum1	100	88.275	Oryzias_latipes_hni
ENSGMOG00000010491	pum1	100	90.476	ENSORLG00015011375	pum1	100	89.881	Oryzias_latipes_hsok
ENSGMOG00000010491	pum1	85	98.072	ENSOMEG00000009312	pum1	90	98.072	Oryzias_melastigma
ENSGMOG00000010491	pum1	94	90.602	ENSOARG00000001899	PUM1	91	91.084	Ovis_aries
ENSGMOG00000010491	pum1	94	90.602	ENSPPAG00000044003	PUM1	91	91.084	Pan_paniscus
ENSGMOG00000010491	pum1	100	74.835	ENSPPRG00000001370	PUM1	70	88.593	Panthera_pardus
ENSGMOG00000010491	pum1	100	74.835	ENSPTIG00000010798	PUM1	70	88.593	Panthera_tigris_altaica
ENSGMOG00000010491	pum1	94	90.602	ENSPTRG00000000453	PUM1	91	91.084	Pan_troglodytes
ENSGMOG00000010491	pum1	94	91.084	ENSPANG00000016338	PUM1	91	91.566	Papio_anubis
ENSGMOG00000010491	pum1	94	92.289	ENSPKIG00000010578	pum1	95	84.926	Paramormyrops_kingsleyae
ENSGMOG00000010491	pum1	100	75.600	ENSPSIG00000014118	PUM1	61	89.122	Pelodiscus_sinensis
ENSGMOG00000010491	pum1	79	91.597	ENSPMGG00000005836	pum1	71	93.554	Periophthalmus_magnuspinnatus
ENSGMOG00000010491	pum1	100	74.236	ENSPEMG00000010009	Pum1	70	88.403	Peromyscus_maniculatus_bairdii
ENSGMOG00000010491	pum1	94	91.325	ENSPCIG00000014151	PUM1	91	91.084	Phascolarctos_cinereus
ENSGMOG00000010491	pum1	95	90.000	ENSPFOG00000007289	pum1	81	97.353	Poecilia_formosa
ENSGMOG00000010491	pum1	100	87.801	ENSPLAG00000007256	pum1	64	97.353	Poecilia_latipinna
ENSGMOG00000010491	pum1	92	89.694	ENSPMEG00000019543	pum1	97	80.917	Poecilia_mexicana
ENSGMOG00000010491	pum1	100	91.297	ENSPREG00000005195	pum1	100	90.444	Poecilia_reticulata
ENSGMOG00000010491	pum1	76	92.901	ENSPCAG00000001979	PUM1	65	92.901	Procavia_capensis
ENSGMOG00000010491	pum1	94	90.361	ENSPCOG00000004398	PUM1	91	90.843	Propithecus_coquereli
ENSGMOG00000010491	pum1	100	90.956	ENSPNYG00000009518	pum1	100	90.956	Pundamilia_nyererei
ENSGMOG00000010491	pum1	57	94.487	ENSPNAG00000026728	pum1	63	93.156	Pygocentrus_nattereri
ENSGMOG00000010491	pum1	94	91.084	ENSRBIG00000042521	PUM1	91	91.566	Rhinopithecus_bieti
ENSGMOG00000010491	pum1	94	90.602	ENSRROG00000020156	PUM1	91	91.084	Rhinopithecus_roxellana
ENSGMOG00000010491	pum1	94	90.602	ENSSBOG00000032037	PUM1	91	91.084	Saimiri_boliviensis_boliviensis
ENSGMOG00000010491	pum1	76	98.795	ENSSMAG00000010918	pum1	96	90.316	Scophthalmus_maximus
ENSGMOG00000010491	pum1	100	91.297	ENSSDUG00000009021	pum1	100	91.212	Seriola_dumerili
ENSGMOG00000010491	pum1	93	90.756	ENSSLDG00000009667	pum1	100	90.651	Seriola_lalandi_dorsalis
ENSGMOG00000010491	pum1	94	78.603	ENSSARG00000003055	PUM1	61	88.973	Sorex_araneus
ENSGMOG00000010491	pum1	100	90.700	ENSSPAG00000016636	pum1	100	91.041	Stegastes_partitus
ENSGMOG00000010491	pum1	100	89.135	ENSSSCG00000003591	PUM1	91	91.566	Sus_scrofa
ENSGMOG00000010491	pum1	100	90.444	ENSTRUG00000013121	pum1	70	97.921	Takifugu_rubripes
ENSGMOG00000010491	pum1	55	90.244	ENSTBEG00000013810	PUM1	58	90.244	Tupaia_belangeri
ENSGMOG00000010491	pum1	94	91.084	ENSUMAG00000009211	PUM1	91	91.566	Ursus_maritimus
ENSGMOG00000010491	pum1	93	82.165	ENSVPAG00000005902	PUM1	69	88.973	Vicugna_pacos
ENSGMOG00000010491	pum1	94	91.084	ENSVVUG00000014631	PUM1	91	91.566	Vulpes_vulpes
ENSGMOG00000010491	pum1	57	97.353	ENSXMAG00000002945	pum1	63	97.353	Xiphophorus_maculatus