EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000010606 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 1604 bases
Position: chrGeneScaffold_1511:839129-840732
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000011354	RRM_1	PF00076.22	5.5e-33	1	2
ENSGMOP00000011354	RRM_1	PF00076.22	5.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000011662	-	561	-	ENSGMOP00000011354	187 (aa)	-	UPI00023F22C5

Gene Model

Click here to download ENSGMOG00000010606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000010606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000010606	-	91	41.808	ENSGMOG00000000869	srsf5a	91	41.243
ENSGMOG00000010606	-	90	35.808	ENSGMOG00000000595	srsf5b	94	38.636
ENSGMOG00000010606	-	90	64.407	ENSGMOG00000007980	srsf9	69	67.816
ENSGMOG00000010606	-	53	41.000	ENSGMOG00000008043	SRSF3	51	47.297
ENSGMOG00000010606	-	84	49.375	ENSGMOG00000006105	srsf6a	57	48.750
ENSGMOG00000010606	-	95	89.266	ENSGMOG00000014787	-	74	88.136
ENSGMOG00000010606	-	90	43.103	ENSGMOG00000012906	srsf4	54	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000010606	-	98	87.634	ENSACIG00000002623	-	97	88.172	Amphilophus_citrinellus
ENSGMOG00000010606	-	97	84.817	ENSACLG00000021693	-	78	82.051	Astatotilapia_calliptera
ENSGMOG00000010606	-	98	96.175	ENSACLG00000005676	-	73	96.133	Astatotilapia_calliptera
ENSGMOG00000010606	-	91	62.842	WBGene00004700	rsp-3	71	60.870	Caenorhabditis_elegans
ENSGMOG00000010606	-	90	70.833	ENSCING00000007375	-	71	70.238	Ciona_intestinalis
ENSGMOG00000010606	-	63	70.339	ENSCING00000000257	-	69	69.492	Ciona_intestinalis
ENSGMOG00000010606	-	63	64.957	ENSCSAVG00000003567	-	70	64.957	Ciona_savignyi
ENSGMOG00000010606	-	90	71.006	ENSCSAVG00000006093	-	85	70.414	Ciona_savignyi
ENSGMOG00000010606	-	90	67.429	FBgn0283477	SF2	69	66.854	Drosophila_melanogaster
ENSGMOG00000010606	-	97	79.558	ENSEBUG00000009582	-	78	79.558	Eptatretus_burgeri
ENSGMOG00000010606	-	97	85.561	ENSFHEG00000017425	-	98	85.561	Fundulus_heteroclitus
ENSGMOG00000010606	-	97	85.638	ENSGAFG00000000609	-	75	85.638	Gambusia_affinis
ENSGMOG00000010606	-	99	95.676	ENSGAFG00000012721	-	73	95.652	Gambusia_affinis
ENSGMOG00000010606	-	100	96.257	ENSGACG00000011094	-	100	96.257	Gasterosteus_aculeatus
ENSGMOG00000010606	-	65	68.033	ENSHBUG00000015600	-	93	66.667	Haplochromis_burtoni
ENSGMOG00000010606	-	97	85.263	ENSHBUG00000015576	-	78	81.959	Haplochromis_burtoni
ENSGMOG00000010606	-	96	82.967	ENSHCOG00000008016	-	72	81.319	Hippocampus_comes
ENSGMOG00000010606	-	97	88.108	ENSMFAG00000034223	-	62	88.108	Macaca_fascicularis
ENSGMOG00000010606	-	97	85.714	ENSMZEG00005019071	-	99	83.684	Maylandia_zebra
ENSGMOG00000010606	-	98	96.175	ENSMZEG00005007947	-	73	96.133	Maylandia_zebra
ENSGMOG00000010606	-	97	87.432	ENSMMOG00000018849	-	74	87.432	Mola_mola
ENSGMOG00000010606	-	98	96.175	ENSNBRG00000019981	-	73	96.133	Neolamprologus_brichardi
ENSGMOG00000010606	-	97	86.188	ENSNBRG00000008134	-	73	84.817	Neolamprologus_brichardi
ENSGMOG00000010606	-	87	68.098	ENSOPRG00000004745	-	96	67.485	Ochotona_princeps
ENSGMOG00000010606	-	97	84.375	ENSONIG00000004857	-	76	84.896	Oreochromis_niloticus
ENSGMOG00000010606	-	91	54.118	ENSOCUG00000026856	-	96	53.488	Oryctolagus_cuniculus
ENSGMOG00000010606	-	97	89.674	ENSORLG00000005314	-	73	90.217	Oryzias_latipes
ENSGMOG00000010606	-	97	89.674	ENSORLG00015015497	-	73	90.217	Oryzias_latipes_hsok
ENSGMOG00000010606	-	97	86.772	ENSOMEG00000017711	-	74	87.302	Oryzias_melastigma
ENSGMOG00000010606	-	98	95.652	ENSPLAG00000019613	-	73	95.652	Poecilia_latipinna
ENSGMOG00000010606	-	98	95.652	ENSPLAG00000019553	-	93	93.548	Poecilia_latipinna
ENSGMOG00000010606	-	97	86.559	ENSPREG00000016792	-	75	86.559	Poecilia_reticulata
ENSGMOG00000010606	-	98	96.175	ENSPNYG00000017115	-	73	96.133	Pundamilia_nyererei
ENSGMOG00000010606	-	97	84.817	ENSPNYG00000020651	-	73	85.340	Pundamilia_nyererei
ENSGMOG00000010606	-	96	93.333	ENSSFOG00015004989	-	66	92.222	Scleropages_formosus
ENSGMOG00000010606	-	96	83.673	ENSSDUG00000003887	-	75	83.673	Seriola_dumerili
ENSGMOG00000010606	-	97	84.530	ENSTRUG00000017058	-	75	85.635	Takifugu_rubripes
ENSGMOG00000010606	-	97	80.874	ENSTNIG00000009993	-	75	82.418	Tetraodon_nigroviridis
ENSGMOG00000010606	-	97	86.188	ENSXCOG00000017888	-	75	86.096	Xiphophorus_couchianus
ENSGMOG00000010606	-	98	95.652	ENSXCOG00000009643	-	74	95.652	Xiphophorus_couchianus
ENSGMOG00000010606	-	97	86.096	ENSXMAG00000010797	-	75	86.096	Xiphophorus_maculatus