EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000011024 (Gene tree)
Gene ID
-
Gene Symbol
lsm3
Alias
-
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
1348 bases
Position
chrGeneScaffold_1934:8072-9419
Accession
ZDB-GENE-161207-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000011788LSMPF01423.221.9e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000012105-288-ENSGMOP0000001178895 (aa)-UPI00023F1F99
Gene Model
Click here to download ENSGMOG00000011024's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011024's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000011024lsm37933.333ENSGMOG00000018235lsm58333.333
ENSGMOG00000011024lsm38332.927ENSGMOG00000013857snrpd26932.927
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000011024lsm310096.842ENSG00000170860LSM39396.842Homo_sapiens
ENSGMOG00000011024lsm310097.895ENSAPOG00000018947lsm39397.895Acanthochromis_polyacanthus
ENSGMOG00000011024lsm310096.842ENSAMEG00000009405LSM39396.842Ailuropoda_melanoleuca
ENSGMOG00000011024lsm310096.842ENSACIG00000004574lsm36696.842Amphilophus_citrinellus
ENSGMOG00000011024lsm310097.895ENSAOCG00000007658lsm39397.895Amphiprion_ocellaris
ENSGMOG00000011024lsm310097.895ENSAPEG00000018621lsm39397.895Amphiprion_percula
ENSGMOG00000011024lsm310097.895ENSATEG00000005153lsm39397.895Anabas_testudineus
ENSGMOG00000011024lsm310096.842ENSAPLG00000014499LSM310096.842Anas_platyrhynchos
ENSGMOG00000011024lsm310096.842ENSACAG00000013503LSM39396.842Anolis_carolinensis
ENSGMOG00000011024lsm310096.842ENSANAG00000034627LSM39396.842Aotus_nancymaae
ENSGMOG00000011024lsm310093.684ENSANAG00000002903-9393.684Aotus_nancymaae
ENSGMOG00000011024lsm310097.895ENSACLG00000001726-9297.895Astatotilapia_calliptera
ENSGMOG00000011024lsm310097.895ENSAMXG00000041214lsm39397.895Astyanax_mexicanus
ENSGMOG00000011024lsm310096.842ENSBTAG00000007363LSM39996.842Bos_taurus
ENSGMOG00000011024lsm39773.913WBGene00003077lsm-39073.913Caenorhabditis_elegans
ENSGMOG00000011024lsm310094.737ENSCAFG00000001760LSM39394.737Canis_familiaris
ENSGMOG00000011024lsm310087.000ENSCAFG00020020950-9387.000Canis_lupus_dingo
ENSGMOG00000011024lsm310093.684ENSCAFG00020026452-9393.684Canis_lupus_dingo
ENSGMOG00000011024lsm310087.368ENSCAFG00020016680-9387.368Canis_lupus_dingo
ENSGMOG00000011024lsm310094.737ENSCAFG00020017266-9394.737Canis_lupus_dingo
ENSGMOG00000011024lsm310094.737ENSCAFG00020021584-9394.737Canis_lupus_dingo
ENSGMOG00000011024lsm310096.842ENSCHIG00000024650LSM39396.842Capra_hircus
ENSGMOG00000011024lsm39976.596ENSTSYG00000028528-9176.596Carlito_syrichta
ENSGMOG00000011024lsm310096.842ENSTSYG00000005204-9396.842Carlito_syrichta
ENSGMOG00000011024lsm310096.842ENSCAPG00000015760LSM39996.842Cavia_aperea
ENSGMOG00000011024lsm310096.842ENSCPOG00000034071LSM39396.842Cavia_porcellus
ENSGMOG00000011024lsm310096.842ENSCCAG00000019503-9396.842Cebus_capucinus
ENSGMOG00000011024lsm310076.842ENSCCAG00000032763-9376.842Cebus_capucinus
ENSGMOG00000011024lsm310096.842ENSCCAG00000036499-9396.842Cebus_capucinus
ENSGMOG00000011024lsm39976.596ENSCATG00000031630-9176.596Cercocebus_atys
ENSGMOG00000011024lsm310096.842ENSCATG00000039421LSM39396.842Cercocebus_atys
ENSGMOG00000011024lsm310096.842ENSCLAG00000015997LSM39396.842Chinchilla_lanigera
ENSGMOG00000011024lsm310091.579ENSCSAG00000019525-9391.579Chlorocebus_sabaeus
ENSGMOG00000011024lsm310096.842ENSCPBG00000014531LSM39396.842Chrysemys_picta_bellii
ENSGMOG00000011024lsm39883.871ENSCSAVG00000009542-8983.871Ciona_savignyi
ENSGMOG00000011024lsm310096.842ENSCANG00000033944-9396.842Colobus_angolensis_palliatus
ENSGMOG00000011024lsm310093.684ENSCANG00000038037-9393.684Colobus_angolensis_palliatus
ENSGMOG00000011024lsm310093.684ENSCANG00000018782-9393.684Colobus_angolensis_palliatus
ENSGMOG00000011024lsm310082.105ENSCGRG00001011396-9582.105Cricetulus_griseus_chok1gshd
ENSGMOG00000011024lsm310073.958ENSCGRG00001008639-9773.958Cricetulus_griseus_chok1gshd
ENSGMOG00000011024lsm310096.842ENSCGRG00001017598Lsm39696.842Cricetulus_griseus_chok1gshd
ENSGMOG00000011024lsm310096.842ENSCGRG00000016159Lsm39696.842Cricetulus_griseus_crigri
ENSGMOG00000011024lsm310082.105ENSCGRG00000012129-10082.105Cricetulus_griseus_crigri
ENSGMOG00000011024lsm310097.895ENSCSEG00000015071lsm37197.895Cynoglossus_semilaevis
ENSGMOG00000011024lsm39898.925ENSCVAG00000006933lsm39198.925Cyprinodon_variegatus
ENSGMOG00000011024lsm310097.895ENSDARG00000089663lsm39397.895Danio_rerio
ENSGMOG00000011024lsm310096.842ENSDNOG00000030808LSM39396.842Dasypus_novemcinctus
ENSGMOG00000011024lsm310096.842ENSDORG00000006894-9396.842Dipodomys_ordii
ENSGMOG00000011024lsm310076.842ENSDORG00000024490-9276.842Dipodomys_ordii
ENSGMOG00000011024lsm310078.947FBgn0051184LSm39278.947Drosophila_melanogaster
ENSGMOG00000011024lsm310096.842ENSETEG00000016207LSM39396.842Echinops_telfairi
ENSGMOG00000011024lsm310091.579ENSEBUG00000004943lsm39391.579Eptatretus_burgeri
ENSGMOG00000011024lsm310096.842ENSEASG00005015443LSM39396.842Equus_asinus_asinus
ENSGMOG00000011024lsm310096.842ENSECAG00000007803LSM39396.842Equus_caballus
ENSGMOG00000011024lsm310096.842ENSELUG00000018922lsm39396.842Esox_lucius
ENSGMOG00000011024lsm310096.842ENSFCAG00000038453LSM39396.842Felis_catus
ENSGMOG00000011024lsm310071.579ENSFCAG00000044344-9371.579Felis_catus
ENSGMOG00000011024lsm310096.842ENSFALG00000012644LSM39396.842Ficedula_albicollis
ENSGMOG00000011024lsm310096.842ENSFDAG00000011470LSM39396.842Fukomys_damarensis
ENSGMOG00000011024lsm310097.895ENSFHEG00000000876lsm39397.895Fundulus_heteroclitus
ENSGMOG00000011024lsm310097.895ENSGAFG00000013965lsm39397.895Gambusia_affinis
ENSGMOG00000011024lsm310097.895ENSGACG00000003488lsm39397.895Gasterosteus_aculeatus
ENSGMOG00000011024lsm310096.842ENSGAGG00000025707LSM39396.842Gopherus_agassizii
ENSGMOG00000011024lsm310096.842ENSGGOG00000010006LSM39396.842Gorilla_gorilla
ENSGMOG00000011024lsm310097.895ENSHBUG00000022399lsm39397.895Haplochromis_burtoni
ENSGMOG00000011024lsm310075.789ENSHGLG00000015564-9275.789Heterocephalus_glaber_female
ENSGMOG00000011024lsm310096.842ENSHGLG00000000651LSM39396.842Heterocephalus_glaber_female
ENSGMOG00000011024lsm310075.789ENSHGLG00100010658-9275.789Heterocephalus_glaber_male
ENSGMOG00000011024lsm310096.842ENSHGLG00100011343LSM39396.842Heterocephalus_glaber_male
ENSGMOG00000011024lsm310096.842ENSHCOG00000013481lsm39396.842Hippocampus_comes
ENSGMOG00000011024lsm310096.842ENSIPUG00000009207lsm39396.842Ictalurus_punctatus
ENSGMOG00000011024lsm310096.842ENSSTOG00000006842LSM39396.842Ictidomys_tridecemlineatus
ENSGMOG00000011024lsm310096.842ENSJJAG00000017351Lsm39396.842Jaculus_jaculus
ENSGMOG00000011024lsm310072.632ENSJJAG00000018311-9272.632Jaculus_jaculus
ENSGMOG00000011024lsm310088.421ENSJJAG00000012797-9388.421Jaculus_jaculus
ENSGMOG00000011024lsm310096.842ENSKMAG00000015182lsm39396.842Kryptolebias_marmoratus
ENSGMOG00000011024lsm310097.895ENSLBEG00000021292lsm39797.895Labrus_bergylta
ENSGMOG00000011024lsm310096.842ENSLOCG00000013560lsm39396.842Lepisosteus_oculatus
ENSGMOG00000011024lsm310096.842ENSLAFG00000023308LSM39296.842Loxodonta_africana
ENSGMOG00000011024lsm310096.842ENSMFAG00000003185LSM39396.842Macaca_fascicularis
ENSGMOG00000011024lsm310096.842ENSMMUG00000023126LSM39396.842Macaca_mulatta
ENSGMOG00000011024lsm310075.789ENSMMUG00000043596-9375.789Macaca_mulatta
ENSGMOG00000011024lsm39977.660ENSMMUG00000002294-9077.660Macaca_mulatta
ENSGMOG00000011024lsm39977.660ENSMNEG00000037686-9177.660Macaca_nemestrina
ENSGMOG00000011024lsm310096.842ENSMNEG00000043632LSM39396.842Macaca_nemestrina
ENSGMOG00000011024lsm310096.842ENSMLEG00000036162LSM39396.842Mandrillus_leucophaeus
ENSGMOG00000011024lsm310097.895ENSMAMG00000012807lsm39397.895Mastacembelus_armatus
ENSGMOG00000011024lsm310097.895ENSMZEG00005016682lsm36897.895Maylandia_zebra
ENSGMOG00000011024lsm310096.842ENSMGAG00000007776LSM39996.842Meleagris_gallopavo
ENSGMOG00000011024lsm310096.842ENSMICG00000032361-9396.842Microcebus_murinus
ENSGMOG00000011024lsm310083.158ENSMICG00000027821-9383.158Microcebus_murinus
ENSGMOG00000011024lsm310096.842ENSMOCG00000014269Lsm39396.842Microtus_ochrogaster
ENSGMOG00000011024lsm310096.842ENSMMOG00000020715lsm39396.842Mola_mola
ENSGMOG00000011024lsm310096.842ENSMODG00000007275LSM39696.842Monodelphis_domestica
ENSGMOG00000011024lsm310097.895ENSMALG00000006485lsm39397.895Monopterus_albus
ENSGMOG00000011024lsm310096.842ENSMUSG00000034192Lsm39396.842Mus_musculus
ENSGMOG00000011024lsm310096.842MGP_PahariEiJ_G0022402Lsm39396.842Mus_pahari
ENSGMOG00000011024lsm310096.842MGP_SPRETEiJ_G0029681Lsm39396.842Mus_spretus
ENSGMOG00000011024lsm38288.462ENSMPUG00000017256-9288.462Mustela_putorius_furo
ENSGMOG00000011024lsm39784.783ENSMPUG00000019120-9084.783Mustela_putorius_furo
ENSGMOG00000011024lsm310091.579ENSMLUG00000024700-9391.579Myotis_lucifugus
ENSGMOG00000011024lsm310096.842ENSMLUG00000010677LSM39396.842Myotis_lucifugus
ENSGMOG00000011024lsm39977.660ENSNGAG00000010207-9277.660Nannospalax_galili
ENSGMOG00000011024lsm310096.842ENSNGAG00000022450Lsm39396.842Nannospalax_galili
ENSGMOG00000011024lsm310071.579ENSNGAG00000013716-9271.579Nannospalax_galili
ENSGMOG00000011024lsm310097.895ENSNBRG00000014318lsm39397.895Neolamprologus_brichardi
ENSGMOG00000011024lsm310096.842ENSNLEG00000005079LSM39396.842Nomascus_leucogenys
ENSGMOG00000011024lsm310087.368ENSNLEG00000030229-9387.368Nomascus_leucogenys
ENSGMOG00000011024lsm310089.474ENSODEG00000019403-9389.474Octodon_degus
ENSGMOG00000011024lsm310094.737ENSODEG00000019158-9394.737Octodon_degus
ENSGMOG00000011024lsm310096.842ENSODEG00000001726LSM39396.842Octodon_degus
ENSGMOG00000011024lsm310095.789ENSODEG00000019740-9395.789Octodon_degus
ENSGMOG00000011024lsm310097.895ENSONIG00000021369-9397.895Oreochromis_niloticus
ENSGMOG00000011024lsm310097.895ENSONIG00000000370lsm39397.895Oreochromis_niloticus
ENSGMOG00000011024lsm310096.842ENSOANG00000012273LSM39396.842Ornithorhynchus_anatinus
ENSGMOG00000011024lsm39596.667ENSOCUG00000011088-8896.667Oryctolagus_cuniculus
ENSGMOG00000011024lsm310096.842ENSOCUG00000027653-9396.842Oryctolagus_cuniculus
ENSGMOG00000011024lsm310096.842ENSORLG00000025900lsm39396.842Oryzias_latipes
ENSGMOG00000011024lsm310096.842ENSORLG00020007125lsm39396.842Oryzias_latipes_hni
ENSGMOG00000011024lsm310096.842ENSORLG00015002944lsm39396.842Oryzias_latipes_hsok
ENSGMOG00000011024lsm310096.842ENSOMEG00000001915lsm39396.842Oryzias_melastigma
ENSGMOG00000011024lsm310095.789ENSOGAG00000028858-9795.789Otolemur_garnettii
ENSGMOG00000011024lsm310096.842ENSOGAG00000007659-9396.842Otolemur_garnettii
ENSGMOG00000011024lsm310087.368ENSOGAG00000033051-9387.368Otolemur_garnettii
ENSGMOG00000011024lsm310096.842ENSOARG00000000600LSM39296.842Ovis_aries
ENSGMOG00000011024lsm310096.842ENSPPAG00000034074LSM39396.842Pan_paniscus
ENSGMOG00000011024lsm310096.842ENSPPRG00000012912-9396.842Panthera_pardus
ENSGMOG00000011024lsm310095.789ENSPPRG00000020953-9395.789Panthera_pardus
ENSGMOG00000011024lsm310090.526ENSPPRG00000010610-8390.526Panthera_pardus
ENSGMOG00000011024lsm310096.842ENSPTIG00000013072-9396.842Panthera_tigris_altaica
ENSGMOG00000011024lsm310096.842ENSPTIG00000003463-9396.842Panthera_tigris_altaica
ENSGMOG00000011024lsm310096.842ENSPTRG00000014650LSM39396.842Pan_troglodytes
ENSGMOG00000011024lsm310096.842ENSPANG00000009378LSM39396.842Papio_anubis
ENSGMOG00000011024lsm310076.842ENSPANG00000032192-9376.842Papio_anubis
ENSGMOG00000011024lsm310096.842ENSPKIG00000008037lsm38596.842Paramormyrops_kingsleyae
ENSGMOG00000011024lsm310096.842ENSPSIG00000015720LSM39396.842Pelodiscus_sinensis
ENSGMOG00000011024lsm310095.789ENSPMGG00000012103lsm39695.789Periophthalmus_magnuspinnatus
ENSGMOG00000011024lsm310080.000ENSPEMG00000020213-9280.000Peromyscus_maniculatus_bairdii
ENSGMOG00000011024lsm310096.842ENSPEMG00000015797Lsm39396.842Peromyscus_maniculatus_bairdii
ENSGMOG00000011024lsm310097.895ENSPFOG00000008372lsm39397.895Poecilia_formosa
ENSGMOG00000011024lsm310097.895ENSPLAG00000000563lsm39397.895Poecilia_latipinna
ENSGMOG00000011024lsm310097.895ENSPMEG00000022052lsm39397.895Poecilia_mexicana
ENSGMOG00000011024lsm310097.895ENSPREG00000022485lsm39397.895Poecilia_reticulata
ENSGMOG00000011024lsm310096.842ENSPPYG00000013402LSM39396.842Pongo_abelii
ENSGMOG00000011024lsm310096.842ENSPCAG00000017077LSM39396.842Procavia_capensis
ENSGMOG00000011024lsm310096.842ENSPCOG00000016217-9396.842Propithecus_coquereli
ENSGMOG00000011024lsm39477.528ENSPCOG00000014435-8977.528Propithecus_coquereli
ENSGMOG00000011024lsm310096.842ENSPVAG00000016795LSM39396.842Pteropus_vampyrus
ENSGMOG00000011024lsm310097.895ENSPNYG00000009552lsm36897.895Pundamilia_nyererei
ENSGMOG00000011024lsm310097.895ENSPNAG00000023467lsm39397.895Pygocentrus_nattereri
ENSGMOG00000011024lsm310096.842ENSRNOG00000008733Lsm39396.842Rattus_norvegicus
ENSGMOG00000011024lsm310096.842ENSRBIG00000034399LSM39396.842Rhinopithecus_bieti
ENSGMOG00000011024lsm310080.000ENSRBIG00000043783-9280.000Rhinopithecus_bieti
ENSGMOG00000011024lsm310085.263ENSRROG00000044047-9385.263Rhinopithecus_roxellana
ENSGMOG00000011024lsm310081.053ENSRROG00000039868-9281.053Rhinopithecus_roxellana
ENSGMOG00000011024lsm310096.842ENSRROG00000033276-9396.842Rhinopithecus_roxellana
ENSGMOG00000011024lsm310078.947ENSRROG00000044056-9378.947Rhinopithecus_roxellana
ENSGMOG00000011024lsm310096.842ENSSBOG00000024310LSM39396.842Saimiri_boliviensis_boliviensis
ENSGMOG00000011024lsm310097.895ENSSFOG00015007071lsm39397.895Scleropages_formosus
ENSGMOG00000011024lsm310097.895ENSSMAG00000001818lsm39397.895Scophthalmus_maximus
ENSGMOG00000011024lsm310097.895ENSSDUG00000006040lsm39397.895Seriola_dumerili
ENSGMOG00000011024lsm310097.895ENSSLDG00000006399lsm39397.895Seriola_lalandi_dorsalis
ENSGMOG00000011024lsm36194.828ENSSARG00000005275-10094.828Sorex_araneus
ENSGMOG00000011024lsm310096.842ENSSPUG00000017047-9996.842Sphenodon_punctatus
ENSGMOG00000011024lsm310087.368ENSSPUG00000005394LSM39387.368Sphenodon_punctatus
ENSGMOG00000011024lsm310084.211ENSSPAG00000000934lsm39384.211Stegastes_partitus
ENSGMOG00000011024lsm39572.222ENSSSCG00000023718-9272.222Sus_scrofa
ENSGMOG00000011024lsm310096.842ENSSSCG00000011601LSM39396.842Sus_scrofa
ENSGMOG00000011024lsm310096.842ENSTGUG00000008327LSM39396.842Taeniopygia_guttata
ENSGMOG00000011024lsm310096.842ENSTRUG00000023175lsm39396.842Takifugu_rubripes
ENSGMOG00000011024lsm310096.842ENSTNIG00000005589lsm39396.842Tetraodon_nigroviridis
ENSGMOG00000011024lsm310086.316ENSTBEG00000001050-9286.316Tupaia_belangeri
ENSGMOG00000011024lsm310096.842ENSTTRG00000011197LSM39396.842Tursiops_truncatus
ENSGMOG00000011024lsm310096.842ENSUAMG00000017250-9396.842Ursus_americanus
ENSGMOG00000011024lsm310096.842ENSUMAG00000015905LSM39396.842Ursus_maritimus
ENSGMOG00000011024lsm310096.842ENSVPAG00000010709LSM310096.842Vicugna_pacos
ENSGMOG00000011024lsm310088.421ENSVVUG00000024228-9388.421Vulpes_vulpes
ENSGMOG00000011024lsm310093.684ENSVVUG00000007332-8593.684Vulpes_vulpes
ENSGMOG00000011024lsm310091.579ENSVVUG00000006481-9391.579Vulpes_vulpes
ENSGMOG00000011024lsm310091.579ENSVVUG00000005684-9391.579Vulpes_vulpes
ENSGMOG00000011024lsm310093.684ENSVVUG00000029294-9393.684Vulpes_vulpes
ENSGMOG00000011024lsm310096.842ENSXETG00000011534lsm39396.842Xenopus_tropicalis
ENSGMOG00000011024lsm310097.895ENSXCOG00000017432LSM39397.895Xiphophorus_couchianus
ENSGMOG00000011024lsm310097.895ENSXMAG00000009151lsm39397.895Xiphophorus_maculatus

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