EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000011232 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 18048 bases
Position: chrGeneScaffold_1755:194100-212147
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012017	Ribonuc_2-5A	PF06479.12	1.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000012342	-	2793	-	ENSGMOP00000012017	931 (aa)	-	UPI00023F229C

Gene Model

Click here to download ENSGMOG00000011232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000011232	ern1	79	65.829	ENSGMOG00000006029	ern2	82	65.829

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011232	ern1	100	86.383	ENSAPOG00000009999	ern1	87	86.383	Acanthochromis_polyacanthus
ENSGMOG00000011232	ern1	100	87.128	ENSACIG00000021716	ern1	86	87.128	Amphilophus_citrinellus
ENSGMOG00000011232	ern1	100	86.809	ENSAOCG00000012309	ern1	87	86.809	Amphiprion_ocellaris
ENSGMOG00000011232	ern1	100	86.277	ENSAPEG00000011263	ern1	98	86.349	Amphiprion_percula
ENSGMOG00000011232	ern1	100	87.340	ENSATEG00000024468	ern1	86	87.340	Anabas_testudineus
ENSGMOG00000011232	ern1	100	87.979	ENSACLG00000027919	ern1	87	87.979	Astatotilapia_calliptera
ENSGMOG00000011232	ern1	99	82.040	ENSAMXG00000000944	ern1	90	82.040	Astyanax_mexicanus
ENSGMOG00000011232	ern1	100	86.489	ENSCSEG00000014500	ern1	91	86.489	Cynoglossus_semilaevis
ENSGMOG00000011232	ern1	100	85.897	ENSCVAG00000002988	ern1	90	85.897	Cyprinodon_variegatus
ENSGMOG00000011232	ern1	100	81.568	ENSDARG00000013997	ern1	97	81.548	Danio_rerio
ENSGMOG00000011232	ern1	99	81.447	ENSELUG00000005957	ern1	92	81.656	Esox_lucius
ENSGMOG00000011232	ern1	100	86.538	ENSFHEG00000005578	ern1	89	86.538	Fundulus_heteroclitus
ENSGMOG00000011232	ern1	100	86.538	ENSGAFG00000020231	ern1	93	84.425	Gambusia_affinis
ENSGMOG00000011232	ern1	100	87.259	ENSGACG00000011700	ern1	97	87.259	Gasterosteus_aculeatus
ENSGMOG00000011232	ern1	100	87.872	ENSHBUG00000012581	ern1	88	87.404	Haplochromis_burtoni
ENSGMOG00000011232	ern1	99	85.486	ENSHCOG00000016199	ern1	90	85.486	Hippocampus_comes
ENSGMOG00000011232	ern1	100	81.568	ENSIPUG00000011083	ern1	90	81.760	Ictalurus_punctatus
ENSGMOG00000011232	ern1	100	85.150	ENSKMAG00000019499	ern1	87	85.150	Kryptolebias_marmoratus
ENSGMOG00000011232	ern1	100	83.457	ENSLBEG00000025907	ern1	88	83.457	Labrus_bergylta
ENSGMOG00000011232	ern1	100	87.021	ENSMAMG00000023439	ern1	88	87.021	Mastacembelus_armatus
ENSGMOG00000011232	ern1	100	87.979	ENSMZEG00005003221	ern1	87	87.979	Maylandia_zebra
ENSGMOG00000011232	ern1	100	85.957	ENSMMOG00000007650	ern1	93	85.957	Mola_mola
ENSGMOG00000011232	ern1	100	87.340	ENSMALG00000017775	ern1	86	87.340	Monopterus_albus
ENSGMOG00000011232	ern1	100	87.872	ENSNBRG00000002179	ern1	88	87.872	Neolamprologus_brichardi
ENSGMOG00000011232	ern1	100	86.809	ENSONIG00000017169	ern1	97	86.809	Oreochromis_niloticus
ENSGMOG00000011232	ern1	100	84.681	ENSORLG00000008940	ern1	87	84.681	Oryzias_latipes
ENSGMOG00000011232	ern1	100	84.681	ENSORLG00020018387	ern1	87	84.681	Oryzias_latipes_hni
ENSGMOG00000011232	ern1	100	84.362	ENSORLG00015007946	ern1	87	84.362	Oryzias_latipes_hsok
ENSGMOG00000011232	ern1	100	85.000	ENSOMEG00000011741	ern1	87	85.000	Oryzias_melastigma
ENSGMOG00000011232	ern1	99	82.040	ENSPKIG00000005593	ern1	95	82.040	Paramormyrops_kingsleyae
ENSGMOG00000011232	ern1	99	86.233	ENSPMGG00000020442	ern1	92	85.957	Periophthalmus_magnuspinnatus
ENSGMOG00000011232	ern1	100	86.752	ENSPFOG00000007378	ern1	88	86.752	Poecilia_formosa
ENSGMOG00000011232	ern1	100	86.752	ENSPLAG00000014780	ern1	89	86.752	Poecilia_latipinna
ENSGMOG00000011232	ern1	100	86.859	ENSPMEG00000016324	ern1	90	85.637	Poecilia_mexicana
ENSGMOG00000011232	ern1	100	86.538	ENSPREG00000006286	ern1	88	86.538	Poecilia_reticulata
ENSGMOG00000011232	ern1	100	87.872	ENSPNYG00000017929	ern1	91	87.872	Pundamilia_nyererei
ENSGMOG00000011232	ern1	99	83.138	ENSPNAG00000029447	ern1	90	83.138	Pygocentrus_nattereri
ENSGMOG00000011232	ern1	100	86.277	ENSSMAG00000015042	ern1	86	86.277	Scophthalmus_maximus
ENSGMOG00000011232	ern1	100	88.085	ENSSDUG00000009098	ern1	86	88.085	Seriola_dumerili
ENSGMOG00000011232	ern1	100	87.766	ENSSLDG00000023254	ern1	86	87.766	Seriola_lalandi_dorsalis
ENSGMOG00000011232	ern1	100	86.489	ENSSPAG00000017539	ern1	88	86.489	Stegastes_partitus
ENSGMOG00000011232	ern1	98	86.255	ENSTRUG00000001041	ern1	89	86.580	Takifugu_rubripes
ENSGMOG00000011232	ern1	99	86.417	ENSTNIG00000017990	ern1	98	86.532	Tetraodon_nigroviridis
ENSGMOG00000011232	ern1	100	86.966	ENSXCOG00000010330	ern1	93	86.966	Xiphophorus_couchianus
ENSGMOG00000011232	ern1	100	86.752	ENSXMAG00000001310	ern1	88	86.752	Xiphophorus_maculatus