EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000011384 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2877 bases
Position: chrGeneScaffold_1178:77-2953
Accession: ZDB-GENE-040801-225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012171	PRP38	PF03371.15	2.2e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000012497	-	933	-	ENSGMOP00000012171	310 (aa)	-	UPI00023F22A0

Gene Model

Click here to download ENSGMOG00000011384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011384	prpf38a	54	94.578	ENSG00000134748	PRPF38A	53	94.578	Homo_sapiens
ENSGMOG00000011384	prpf38a	54	98.795	ENSAPOG00000011652	prpf38a	54	98.795	Acanthochromis_polyacanthus
ENSGMOG00000011384	prpf38a	54	94.578	ENSAMEG00000009319	PRPF38A	53	94.578	Ailuropoda_melanoleuca
ENSGMOG00000011384	prpf38a	54	94.578	ENSACIG00000012292	prpf38a	54	94.578	Amphilophus_citrinellus
ENSGMOG00000011384	prpf38a	54	98.795	ENSAOCG00000018004	prpf38a	54	98.795	Amphiprion_ocellaris
ENSGMOG00000011384	prpf38a	54	98.795	ENSAPEG00000021414	prpf38a	54	98.795	Amphiprion_percula
ENSGMOG00000011384	prpf38a	54	95.181	ENSATEG00000004608	prpf38a	54	95.181	Anabas_testudineus
ENSGMOG00000011384	prpf38a	54	93.976	ENSACAG00000008249	PRPF38A	53	93.976	Anolis_carolinensis
ENSGMOG00000011384	prpf38a	54	94.578	ENSANAG00000027839	PRPF38A	53	94.578	Aotus_nancymaae
ENSGMOG00000011384	prpf38a	54	55.294	ENSANAG00000029204	-	52	55.294	Aotus_nancymaae
ENSGMOG00000011384	prpf38a	54	96.988	ENSACLG00000021595	prpf38a	55	96.988	Astatotilapia_calliptera
ENSGMOG00000011384	prpf38a	54	96.988	ENSAMXG00000029274	prpf38a	53	96.988	Astyanax_mexicanus
ENSGMOG00000011384	prpf38a	54	94.578	ENSBTAG00000002720	PRPF38A	56	94.578	Bos_taurus
ENSGMOG00000011384	prpf38a	54	68.072	WBGene00008380	prp-38	52	68.072	Caenorhabditis_elegans
ENSGMOG00000011384	prpf38a	54	94.578	ENSCJAG00000021594	PRPF38A	56	94.578	Callithrix_jacchus
ENSGMOG00000011384	prpf38a	54	94.578	ENSCAFG00000003740	PRPF38A	53	94.578	Canis_familiaris
ENSGMOG00000011384	prpf38a	54	94.578	ENSCAFG00020010939	PRPF38A	53	94.578	Canis_lupus_dingo
ENSGMOG00000011384	prpf38a	54	94.578	ENSCHIG00000024730	PRPF38A	53	94.578	Capra_hircus
ENSGMOG00000011384	prpf38a	54	94.578	ENSTSYG00000009868	-	53	94.578	Carlito_syrichta
ENSGMOG00000011384	prpf38a	54	94.578	ENSCPOG00000005079	PRPF38A	54	94.578	Cavia_porcellus
ENSGMOG00000011384	prpf38a	54	94.578	ENSCCAG00000026502	PRPF38A	53	94.578	Cebus_capucinus
ENSGMOG00000011384	prpf38a	54	94.578	ENSCATG00000032296	PRPF38A	53	94.578	Cercocebus_atys
ENSGMOG00000011384	prpf38a	54	56.024	ENSCATG00000044190	-	50	56.024	Cercocebus_atys
ENSGMOG00000011384	prpf38a	54	94.578	ENSCLAG00000005816	PRPF38A	53	94.578	Chinchilla_lanigera
ENSGMOG00000011384	prpf38a	54	93.976	ENSCPBG00000014791	PRPF38A	53	93.976	Chrysemys_picta_bellii
ENSGMOG00000011384	prpf38a	54	77.711	ENSCSAVG00000009580	-	55	77.711	Ciona_savignyi
ENSGMOG00000011384	prpf38a	54	94.578	ENSCANG00000032608	PRPF38A	56	94.578	Colobus_angolensis_palliatus
ENSGMOG00000011384	prpf38a	54	77.108	ENSCGRG00001002557	-	54	77.108	Cricetulus_griseus_chok1gshd
ENSGMOG00000011384	prpf38a	54	94.578	ENSCGRG00001018502	-	53	94.578	Cricetulus_griseus_chok1gshd
ENSGMOG00000011384	prpf38a	54	94.578	ENSCGRG00000014868	Prpf38a	53	94.578	Cricetulus_griseus_crigri
ENSGMOG00000011384	prpf38a	54	93.373	ENSCSEG00000001269	prpf38a	57	93.373	Cynoglossus_semilaevis
ENSGMOG00000011384	prpf38a	54	98.193	ENSCVAG00000012305	prpf38a	54	98.193	Cyprinodon_variegatus
ENSGMOG00000011384	prpf38a	54	98.193	ENSDARG00000039213	prpf38a	53	98.193	Danio_rerio
ENSGMOG00000011384	prpf38a	54	94.578	ENSDNOG00000042326	PRPF38A	54	94.578	Dasypus_novemcinctus
ENSGMOG00000011384	prpf38a	54	89.759	ENSDORG00000023691	-	59	89.759	Dipodomys_ordii
ENSGMOG00000011384	prpf38a	54	89.759	ENSDORG00000025371	-	59	89.759	Dipodomys_ordii
ENSGMOG00000011384	prpf38a	54	77.711	FBgn0050342	Prp38	50	77.711	Drosophila_melanogaster
ENSGMOG00000011384	prpf38a	54	89.157	ENSEBUG00000012588	prpf38a	53	89.157	Eptatretus_burgeri
ENSGMOG00000011384	prpf38a	54	94.578	ENSEASG00005014427	PRPF38A	53	94.578	Equus_asinus_asinus
ENSGMOG00000011384	prpf38a	54	94.578	ENSECAG00000022628	PRPF38A	53	94.578	Equus_caballus
ENSGMOG00000011384	prpf38a	54	97.590	ENSELUG00000021094	prpf38a	61	93.103	Esox_lucius
ENSGMOG00000011384	prpf38a	54	94.578	ENSFCAG00000002518	PRPF38A	53	94.578	Felis_catus
ENSGMOG00000011384	prpf38a	54	89.759	ENSFALG00000003612	-	55	89.759	Ficedula_albicollis
ENSGMOG00000011384	prpf38a	54	94.578	ENSFDAG00000011287	PRPF38A	54	94.578	Fukomys_damarensis
ENSGMOG00000011384	prpf38a	54	97.590	ENSFHEG00000014317	prpf38a	56	97.590	Fundulus_heteroclitus
ENSGMOG00000011384	prpf38a	54	94.578	ENSGALG00000010627	PRPF38A	53	94.578	Gallus_gallus
ENSGMOG00000011384	prpf38a	54	98.193	ENSGAFG00000012422	prpf38a	54	98.193	Gambusia_affinis
ENSGMOG00000011384	prpf38a	54	95.783	ENSGACG00000005423	prpf38a	54	95.783	Gasterosteus_aculeatus
ENSGMOG00000011384	prpf38a	54	93.976	ENSGAGG00000020547	PRPF38A	53	93.976	Gopherus_agassizii
ENSGMOG00000011384	prpf38a	54	94.578	ENSGGOG00000003940	PRPF38A	53	94.578	Gorilla_gorilla
ENSGMOG00000011384	prpf38a	54	96.988	ENSHBUG00000020572	prpf38a	71	96.988	Haplochromis_burtoni
ENSGMOG00000011384	prpf38a	54	81.928	ENSHGLG00000007918	-	53	81.928	Heterocephalus_glaber_female
ENSGMOG00000011384	prpf38a	54	94.578	ENSHGLG00000000475	PRPF38A	53	94.578	Heterocephalus_glaber_female
ENSGMOG00000011384	prpf38a	54	94.578	ENSHGLG00100008935	PRPF38A	53	94.578	Heterocephalus_glaber_male
ENSGMOG00000011384	prpf38a	54	81.928	ENSHGLG00100003928	-	53	81.928	Heterocephalus_glaber_male
ENSGMOG00000011384	prpf38a	54	93.373	ENSHCOG00000020781	prpf38a	52	93.373	Hippocampus_comes
ENSGMOG00000011384	prpf38a	54	97.590	ENSIPUG00000005757	prpf38a	57	97.590	Ictalurus_punctatus
ENSGMOG00000011384	prpf38a	54	94.578	ENSSTOG00000015610	PRPF38A	53	94.578	Ictidomys_tridecemlineatus
ENSGMOG00000011384	prpf38a	54	93.373	ENSJJAG00000015811	Prpf38a	53	93.373	Jaculus_jaculus
ENSGMOG00000011384	prpf38a	54	96.988	ENSKMAG00000006588	prpf38a	54	96.988	Kryptolebias_marmoratus
ENSGMOG00000011384	prpf38a	54	95.783	ENSLBEG00000020585	prpf38a	54	95.783	Labrus_bergylta
ENSGMOG00000011384	prpf38a	54	93.373	ENSLACG00000011495	PRPF38A	53	93.373	Latimeria_chalumnae
ENSGMOG00000011384	prpf38a	54	95.181	ENSLOCG00000006262	prpf38a	54	95.181	Lepisosteus_oculatus
ENSGMOG00000011384	prpf38a	54	94.578	ENSLAFG00000025862	PRPF38A	53	94.578	Loxodonta_africana
ENSGMOG00000011384	prpf38a	54	94.578	ENSMFAG00000039449	PRPF38A	56	94.578	Macaca_fascicularis
ENSGMOG00000011384	prpf38a	54	94.578	ENSMNEG00000031221	PRPF38A	53	94.578	Macaca_nemestrina
ENSGMOG00000011384	prpf38a	54	56.024	ENSMNEG00000040242	-	50	56.024	Macaca_nemestrina
ENSGMOG00000011384	prpf38a	54	94.578	ENSMLEG00000041105	PRPF38A	53	94.578	Mandrillus_leucophaeus
ENSGMOG00000011384	prpf38a	54	97.590	ENSMAMG00000015431	prpf38a	56	97.590	Mastacembelus_armatus
ENSGMOG00000011384	prpf38a	54	96.988	ENSMZEG00005017838	prpf38a	54	96.988	Maylandia_zebra
ENSGMOG00000011384	prpf38a	54	94.578	ENSMGAG00000011176	PRPF38A	56	94.578	Meleagris_gallopavo
ENSGMOG00000011384	prpf38a	54	89.759	ENSMAUG00000018029	-	63	89.759	Mesocricetus_auratus
ENSGMOG00000011384	prpf38a	54	94.578	ENSMICG00000014193	PRPF38A	53	94.578	Microcebus_murinus
ENSGMOG00000011384	prpf38a	54	94.578	ENSMOCG00000013080	Prpf38a	53	94.578	Microtus_ochrogaster
ENSGMOG00000011384	prpf38a	54	96.386	ENSMMOG00000016972	prpf38a	58	96.386	Mola_mola
ENSGMOG00000011384	prpf38a	54	94.578	ENSMODG00000000644	PRPF38A	53	94.578	Monodelphis_domestica
ENSGMOG00000011384	prpf38a	54	96.988	ENSMALG00000019363	prpf38a	52	96.988	Monopterus_albus
ENSGMOG00000011384	prpf38a	54	93.976	MGP_CAROLIEiJ_G0026269	Prpf38a	53	93.976	Mus_caroli
ENSGMOG00000011384	prpf38a	54	93.976	ENSMUSG00000063800	Prpf38a	53	93.976	Mus_musculus
ENSGMOG00000011384	prpf38a	54	93.976	MGP_PahariEiJ_G0028602	Prpf38a	53	93.976	Mus_pahari
ENSGMOG00000011384	prpf38a	54	93.976	MGP_SPRETEiJ_G0027238	Prpf38a	82	93.976	Mus_spretus
ENSGMOG00000011384	prpf38a	54	94.578	ENSMPUG00000006896	PRPF38A	53	94.578	Mustela_putorius_furo
ENSGMOG00000011384	prpf38a	54	94.578	ENSNGAG00000011884	Prpf38a	54	94.578	Nannospalax_galili
ENSGMOG00000011384	prpf38a	54	95.181	ENSNBRG00000004013	prpf38a	53	95.181	Neolamprologus_brichardi
ENSGMOG00000011384	prpf38a	54	94.578	ENSMEUG00000003860	PRPF38A	53	94.578	Notamacropus_eugenii
ENSGMOG00000011384	prpf38a	54	94.578	ENSOPRG00000008985	PRPF38A	69	94.578	Ochotona_princeps
ENSGMOG00000011384	prpf38a	54	94.578	ENSODEG00000005869	PRPF38A	53	94.578	Octodon_degus
ENSGMOG00000011384	prpf38a	54	96.386	ENSONIG00000007816	prpf38a	54	96.386	Oreochromis_niloticus
ENSGMOG00000011384	prpf38a	54	94.578	ENSOCUG00000000963	PRPF38A	53	94.578	Oryctolagus_cuniculus
ENSGMOG00000011384	prpf38a	54	97.590	ENSORLG00000013485	prpf38a	59	97.590	Oryzias_latipes
ENSGMOG00000011384	prpf38a	54	97.590	ENSORLG00020002130	prpf38a	59	97.590	Oryzias_latipes_hni
ENSGMOG00000011384	prpf38a	54	97.590	ENSORLG00015021393	prpf38a	57	97.590	Oryzias_latipes_hsok
ENSGMOG00000011384	prpf38a	54	96.988	ENSOMEG00000016333	prpf38a	54	96.988	Oryzias_melastigma
ENSGMOG00000011384	prpf38a	54	94.578	ENSOGAG00000005423	PRPF38A	53	94.578	Otolemur_garnettii
ENSGMOG00000011384	prpf38a	54	94.578	ENSOARG00000005373	PRPF38A	53	94.578	Ovis_aries
ENSGMOG00000011384	prpf38a	54	94.578	ENSPPAG00000030905	PRPF38A	53	94.578	Pan_paniscus
ENSGMOG00000011384	prpf38a	54	75.904	ENSPPAG00000033867	-	53	75.904	Pan_paniscus
ENSGMOG00000011384	prpf38a	54	94.578	ENSPPRG00000013268	PRPF38A	53	94.578	Panthera_pardus
ENSGMOG00000011384	prpf38a	54	94.578	ENSPTIG00000015419	PRPF38A	53	94.578	Panthera_tigris_altaica
ENSGMOG00000011384	prpf38a	54	94.578	ENSPTRG00000000739	PRPF38A	56	94.578	Pan_troglodytes
ENSGMOG00000011384	prpf38a	54	94.578	ENSPANG00000015483	PRPF38A	53	94.578	Papio_anubis
ENSGMOG00000011384	prpf38a	54	94.578	ENSPKIG00000011439	prpf38a	54	94.578	Paramormyrops_kingsleyae
ENSGMOG00000011384	prpf38a	54	93.976	ENSPSIG00000017487	PRPF38A	53	93.976	Pelodiscus_sinensis
ENSGMOG00000011384	prpf38a	54	94.578	ENSPMGG00000021352	prpf38a	57	94.578	Periophthalmus_magnuspinnatus
ENSGMOG00000011384	prpf38a	54	94.578	ENSPEMG00000023277	-	53	94.578	Peromyscus_maniculatus_bairdii
ENSGMOG00000011384	prpf38a	54	87.349	ENSPEMG00000011212	-	51	87.349	Peromyscus_maniculatus_bairdii
ENSGMOG00000011384	prpf38a	54	93.976	ENSPCIG00000022369	-	53	93.976	Phascolarctos_cinereus
ENSGMOG00000011384	prpf38a	54	98.193	ENSPFOG00000004248	prpf38a	54	98.193	Poecilia_formosa
ENSGMOG00000011384	prpf38a	54	98.193	ENSPLAG00000010328	prpf38a	54	98.193	Poecilia_latipinna
ENSGMOG00000011384	prpf38a	54	98.193	ENSPMEG00000011804	prpf38a	54	98.193	Poecilia_mexicana
ENSGMOG00000011384	prpf38a	54	98.193	ENSPREG00000002835	prpf38a	51	98.193	Poecilia_reticulata
ENSGMOG00000011384	prpf38a	54	79.532	ENSPPYG00000001348	PRPF38A	53	79.532	Pongo_abelii
ENSGMOG00000011384	prpf38a	54	93.976	ENSPCAG00000013328	PRPF38A	53	93.976	Procavia_capensis
ENSGMOG00000011384	prpf38a	54	94.578	ENSPCOG00000016387	-	53	94.578	Propithecus_coquereli
ENSGMOG00000011384	prpf38a	54	80.120	ENSPCOG00000020709	-	56	80.120	Propithecus_coquereli
ENSGMOG00000011384	prpf38a	54	94.578	ENSPVAG00000009803	PRPF38A	53	94.578	Pteropus_vampyrus
ENSGMOG00000011384	prpf38a	54	96.988	ENSPNYG00000005571	prpf38a	54	96.988	Pundamilia_nyererei
ENSGMOG00000011384	prpf38a	54	95.783	ENSPNAG00000010399	prpf38a	53	95.783	Pygocentrus_nattereri
ENSGMOG00000011384	prpf38a	54	95.181	ENSRNOG00000009451	Prpf38a	53	95.181	Rattus_norvegicus
ENSGMOG00000011384	prpf38a	54	94.578	ENSRBIG00000036442	PRPF38A	56	94.578	Rhinopithecus_bieti
ENSGMOG00000011384	prpf38a	54	77.711	ENSRROG00000040003	-	54	77.711	Rhinopithecus_roxellana
ENSGMOG00000011384	prpf38a	54	94.578	ENSRROG00000032788	PRPF38A	53	94.578	Rhinopithecus_roxellana
ENSGMOG00000011384	prpf38a	54	94.578	ENSSBOG00000019515	PRPF38A	53	94.578	Saimiri_boliviensis_boliviensis
ENSGMOG00000011384	prpf38a	54	83.735	ENSSHAG00000006029	-	55	83.735	Sarcophilus_harrisii
ENSGMOG00000011384	prpf38a	54	95.181	ENSSFOG00015013572	prpf38a	54	95.181	Scleropages_formosus
ENSGMOG00000011384	prpf38a	54	96.988	ENSSMAG00000015379	prpf38a	54	96.988	Scophthalmus_maximus
ENSGMOG00000011384	prpf38a	54	98.795	ENSSDUG00000001324	prpf38a	54	98.795	Seriola_dumerili
ENSGMOG00000011384	prpf38a	54	98.795	ENSSLDG00000014803	prpf38a	54	98.795	Seriola_lalandi_dorsalis
ENSGMOG00000011384	prpf38a	54	62.651	ENSSARG00000014458	PRPF38A	53	62.651	Sorex_araneus
ENSGMOG00000011384	prpf38a	54	93.976	ENSSPUG00000013259	PRPF38A	53	93.976	Sphenodon_punctatus
ENSGMOG00000011384	prpf38a	54	94.578	ENSSSCG00000028288	PRPF38A	53	94.578	Sus_scrofa
ENSGMOG00000011384	prpf38a	54	87.349	ENSTGUG00000008995	PRPF38A	53	87.349	Taeniopygia_guttata
ENSGMOG00000011384	prpf38a	54	96.386	ENSTRUG00000003374	prpf38a	51	96.386	Takifugu_rubripes
ENSGMOG00000011384	prpf38a	54	93.452	ENSTNIG00000005533	prpf38a	54	93.452	Tetraodon_nigroviridis
ENSGMOG00000011384	prpf38a	54	94.578	ENSTBEG00000000725	PRPF38A	53	94.578	Tupaia_belangeri
ENSGMOG00000011384	prpf38a	54	94.578	ENSTTRG00000016139	PRPF38A	53	94.578	Tursiops_truncatus
ENSGMOG00000011384	prpf38a	54	94.578	ENSUAMG00000000625	PRPF38A	53	94.578	Ursus_americanus
ENSGMOG00000011384	prpf38a	54	94.578	ENSUMAG00000022674	PRPF38A	53	94.578	Ursus_maritimus
ENSGMOG00000011384	prpf38a	54	94.578	ENSVPAG00000000907	PRPF38A	53	94.578	Vicugna_pacos
ENSGMOG00000011384	prpf38a	54	94.578	ENSVVUG00000004475	PRPF38A	53	94.578	Vulpes_vulpes
ENSGMOG00000011384	prpf38a	54	91.566	ENSXETG00000008060	prpf38a	53	91.566	Xenopus_tropicalis
ENSGMOG00000011384	prpf38a	54	96.386	ENSXCOG00000007393	prpf38a	55	96.386	Xiphophorus_couchianus
ENSGMOG00000011384	prpf38a	54	98.193	ENSXMAG00000026143	prpf38a	54	98.193	Xiphophorus_maculatus