EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000011409 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 7674 bases
Position: chrGeneScaffold_1755:455444-463117
Accession: ZDB-GENE-050913-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012207	zf-C2H2	PF00096.26	3e-30	1	5
ENSGMOP00000012207	zf-C2H2	PF00096.26	3e-30	2	5
ENSGMOP00000012207	zf-C2H2	PF00096.26	3e-30	3	5
ENSGMOP00000012207	zf-C2H2	PF00096.26	3e-30	4	5
ENSGMOP00000012207	zf-C2H2	PF00096.26	3e-30	5	5
ENSGMOP00000012207	zf-met	PF12874.7	6.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000012534	-	1947	-	ENSGMOP00000012207	648 (aa)	-	UPI00023F23D8

Gene Model

Click here to download ENSGMOG00000011409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000011409	e4f1	68	34.211	ENSGMOG00000016554	znf646	82	34.821
ENSGMOG00000011409	e4f1	57	30.939	ENSGMOG00000012038	prdm5	100	40.000
ENSGMOG00000011409	e4f1	69	33.533	ENSGMOG00000002344	zbtb41	62	34.177
ENSGMOG00000011409	e4f1	57	30.387	ENSGMOG00000009850	-	99	37.037
ENSGMOG00000011409	e4f1	71	31.034	ENSGMOG00000003238	-	100	42.105
ENSGMOG00000011409	e4f1	66	33.766	ENSGMOG00000017555	znf710b	86	34.568
ENSGMOG00000011409	e4f1	90	41.975	ENSGMOG00000006668	znf236	77	41.975
ENSGMOG00000011409	e4f1	67	36.612	ENSGMOG00000007875	ZNF319	98	36.612
ENSGMOG00000011409	e4f1	72	37.179	ENSGMOG00000012893	si:ch211-216l23.1	57	37.179
ENSGMOG00000011409	e4f1	67	35.507	ENSGMOG00000004063	ZNF628	99	35.507
ENSGMOG00000011409	e4f1	67	38.961	ENSGMOG00000004315	-	96	38.961
ENSGMOG00000011409	e4f1	64	35.833	ENSGMOG00000007538	znf366	64	35.833
ENSGMOG00000011409	e4f1	51	38.788	ENSGMOG00000015258	ZNF384	54	38.788
ENSGMOG00000011409	e4f1	57	34.906	ENSGMOG00000018506	-	100	39.394
ENSGMOG00000011409	e4f1	69	38.158	ENSGMOG00000004242	znf319b	89	38.158
ENSGMOG00000011409	e4f1	54	38.272	ENSGMOG00000019123	gfi1b	63	38.272
ENSGMOG00000011409	e4f1	62	35.443	ENSGMOG00000015143	-	62	43.243
ENSGMOG00000011409	e4f1	64	37.226	ENSGMOG00000000494	-	97	37.226
ENSGMOG00000011409	e4f1	58	37.143	ENSGMOG00000007809	-	98	37.143
ENSGMOG00000011409	e4f1	63	36.364	ENSGMOG00000017526	-	97	39.560
ENSGMOG00000011409	e4f1	69	39.474	ENSGMOG00000009187	ZNF626	74	41.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011409	e4f1	95	68.454	ENSCSEG00000015852	e4f1	70	77.477	Cynoglossus_semilaevis
ENSGMOG00000011409	e4f1	95	62.579	ENSCVAG00000002788	e4f1	95	63.339	Cyprinodon_variegatus
ENSGMOG00000011409	e4f1	76	46.316	ENSEBUG00000016435	e4f1	90	62.766	Eptatretus_burgeri
ENSGMOG00000011409	e4f1	90	62.424	ENSFHEG00000022551	e4f1	80	62.974	Fundulus_heteroclitus
ENSGMOG00000011409	e4f1	95	70.181	ENSGACG00000011808	e4f1	82	69.672	Gasterosteus_aculeatus
ENSGMOG00000011409	e4f1	95	61.250	ENSHCOG00000016455	e4f1	100	60.938	Hippocampus_comes
ENSGMOG00000011409	e4f1	100	54.396	ENSIPUG00000005379	e4f1	99	54.396	Ictalurus_punctatus
ENSGMOG00000011409	e4f1	95	64.130	ENSLBEG00000026373	e4f1	82	64.163	Labrus_bergylta
ENSGMOG00000011409	e4f1	100	65.714	ENSMMOG00000007612	e4f1	100	65.286	Mola_mola
ENSGMOG00000011409	e4f1	95	65.077	ENSMALG00000007314	e4f1	83	66.562	Monopterus_albus
ENSGMOG00000011409	e4f1	96	64.587	ENSORLG00000009160	e4f1	83	64.275	Oryzias_latipes
ENSGMOG00000011409	e4f1	96	61.883	ENSORLG00020017974	e4f1	84	61.940	Oryzias_latipes_hni
ENSGMOG00000011409	e4f1	95	64.632	ENSORLG00015007385	e4f1	83	64.844	Oryzias_latipes_hsok
ENSGMOG00000011409	e4f1	95	65.938	ENSOMEG00000012220	e4f1	82	65.512	Oryzias_melastigma
ENSGMOG00000011409	e4f1	99	63.062	ENSPKIG00000001942	e4f1	87	62.903	Paramormyrops_kingsleyae
ENSGMOG00000011409	e4f1	95	64.773	ENSPMGG00000020527	e4f1	100	64.099	Periophthalmus_magnuspinnatus
ENSGMOG00000011409	e4f1	95	59.296	ENSSFOG00015021291	e4f1	82	59.296	Scleropages_formosus
ENSGMOG00000011409	e4f1	100	67.661	ENSSMAG00000014720	e4f1	90	67.818	Scophthalmus_maximus
ENSGMOG00000011409	e4f1	97	51.496	ENSSPUG00000011420	E4F1	83	51.339	Sphenodon_punctatus
ENSGMOG00000011409	e4f1	100	69.355	ENSTRUG00000005176	e4f1	89	69.355	Takifugu_rubripes
ENSGMOG00000011409	e4f1	95	80.000	ENSTNIG00000018001	e4f1	88	80.000	Tetraodon_nigroviridis
ENSGMOG00000011409	e4f1	83	67.257	ENSXETG00000016091	e4f1	99	67.257	Xenopus_tropicalis