EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000011486 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 5704 bases
Position: chrGeneScaffold_377:524917-530620
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012289	efThoc1	PF11957.8	3.5e-142	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000012617	-	1968	-	ENSGMOP00000012289	656 (aa)	-	UPI00023F2308

Gene Model

Click here to download ENSGMOG00000011486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011486	thoc1	99	72.061	ENSG00000079134	THOC1	99	77.574	Homo_sapiens
ENSGMOG00000011486	thoc1	99	72.061	ENSAMEG00000006645	THOC1	99	72.061	Ailuropoda_melanoleuca
ENSGMOG00000011486	thoc1	97	84.748	ENSACIG00000019392	thoc1	94	88.072	Amphilophus_citrinellus
ENSGMOG00000011486	thoc1	99	84.049	ENSAOCG00000008391	thoc1	99	84.049	Amphiprion_ocellaris
ENSGMOG00000011486	thoc1	99	89.417	ENSAPEG00000001093	thoc1	99	89.417	Amphiprion_percula
ENSGMOG00000011486	thoc1	99	89.417	ENSATEG00000004783	thoc1	99	89.417	Anabas_testudineus
ENSGMOG00000011486	thoc1	98	73.023	ENSAPLG00000016149	THOC1	97	73.023	Anas_platyrhynchos
ENSGMOG00000011486	thoc1	99	72.462	ENSACAG00000008307	THOC1	96	71.846	Anolis_carolinensis
ENSGMOG00000011486	thoc1	99	71.450	ENSANAG00000033200	THOC1	99	71.450	Aotus_nancymaae
ENSGMOG00000011486	thoc1	99	88.957	ENSACLG00000016836	thoc1	99	88.957	Astatotilapia_calliptera
ENSGMOG00000011486	thoc1	94	76.038	ENSAMXG00000014708	thoc1	97	75.719	Astyanax_mexicanus
ENSGMOG00000011486	thoc1	99	72.519	ENSBTAG00000019215	THOC1	99	72.519	Bos_taurus
ENSGMOG00000011486	thoc1	71	35.876	WBGene00020172	thoc-1	73	35.614	Caenorhabditis_elegans
ENSGMOG00000011486	thoc1	99	72.214	ENSCJAG00000020450	THOC1	99	72.214	Callithrix_jacchus
ENSGMOG00000011486	thoc1	99	72.214	ENSCAFG00000018324	THOC1	99	72.214	Canis_familiaris
ENSGMOG00000011486	thoc1	99	72.214	ENSCAFG00020017894	THOC1	99	72.214	Canis_lupus_dingo
ENSGMOG00000011486	thoc1	99	72.519	ENSCHIG00000015399	THOC1	99	73.364	Capra_hircus
ENSGMOG00000011486	thoc1	99	72.214	ENSTSYG00000010585	THOC1	98	72.214	Carlito_syrichta
ENSGMOG00000011486	thoc1	97	52.012	ENSCAPG00000016270	THOC1	97	52.012	Cavia_aperea
ENSGMOG00000011486	thoc1	99	71.908	ENSCPOG00000000959	THOC1	99	71.908	Cavia_porcellus
ENSGMOG00000011486	thoc1	99	72.214	ENSCCAG00000025766	THOC1	99	72.214	Cebus_capucinus
ENSGMOG00000011486	thoc1	99	69.924	ENSCATG00000028180	THOC1	96	77.746	Cercocebus_atys
ENSGMOG00000011486	thoc1	97	73.396	ENSCLAG00000009117	THOC1	99	73.396	Chinchilla_lanigera
ENSGMOG00000011486	thoc1	99	72.214	ENSCSAG00000017631	THOC1	99	72.214	Chlorocebus_sabaeus
ENSGMOG00000011486	thoc1	79	78.423	ENSCHOG00000010609	THOC1	78	78.423	Choloepus_hoffmanni
ENSGMOG00000011486	thoc1	99	73.507	ENSCPBG00000027558	THOC1	99	73.507	Chrysemys_picta_bellii
ENSGMOG00000011486	thoc1	73	47.465	ENSCING00000007663	-	98	46.869	Ciona_intestinalis
ENSGMOG00000011486	thoc1	94	46.939	ENSCSAVG00000010649	-	100	46.688	Ciona_savignyi
ENSGMOG00000011486	thoc1	99	71.865	ENSCANG00000034265	THOC1	96	78.363	Colobus_angolensis_palliatus
ENSGMOG00000011486	thoc1	99	72.546	ENSCGRG00001016464	Thoc1	98	72.546	Cricetulus_griseus_chok1gshd
ENSGMOG00000011486	thoc1	98	72.910	ENSCGRG00000010269	-	99	73.742	Cricetulus_griseus_crigri
ENSGMOG00000011486	thoc1	89	60.544	ENSCGRG00000003390	-	97	60.544	Cricetulus_griseus_crigri
ENSGMOG00000011486	thoc1	99	85.084	ENSCSEG00000012486	thoc1	99	86.151	Cynoglossus_semilaevis
ENSGMOG00000011486	thoc1	99	86.810	ENSCVAG00000020600	thoc1	99	86.810	Cyprinodon_variegatus
ENSGMOG00000011486	thoc1	99	82.280	ENSDARG00000088246	thoc1	99	82.280	Danio_rerio
ENSGMOG00000011486	thoc1	99	72.018	ENSDNOG00000019217	THOC1	99	72.018	Dasypus_novemcinctus
ENSGMOG00000011486	thoc1	97	68.868	ENSDORG00000008060	Thoc1	98	68.711	Dipodomys_ordii
ENSGMOG00000011486	thoc1	99	36.454	FBgn0037382	Hpr1	96	35.319	Drosophila_melanogaster
ENSGMOG00000011486	thoc1	89	55.196	ENSETEG00000004165	THOC1	89	58.349	Echinops_telfairi
ENSGMOG00000011486	thoc1	92	62.521	ENSEBUG00000005998	thoc1	98	63.184	Eptatretus_burgeri
ENSGMOG00000011486	thoc1	99	71.908	ENSEASG00005002549	THOC1	95	71.145	Equus_asinus_asinus
ENSGMOG00000011486	thoc1	99	72.366	ENSECAG00000009267	THOC1	89	72.366	Equus_caballus
ENSGMOG00000011486	thoc1	79	57.447	ENSEEUG00000012214	-	81	57.447	Erinaceus_europaeus
ENSGMOG00000011486	thoc1	99	86.769	ENSELUG00000023277	thoc1	99	86.769	Esox_lucius
ENSGMOG00000011486	thoc1	99	72.214	ENSFCAG00000022454	THOC1	86	72.214	Felis_catus
ENSGMOG00000011486	thoc1	97	72.855	ENSFALG00000006205	THOC1	99	72.855	Ficedula_albicollis
ENSGMOG00000011486	thoc1	98	72.643	ENSFDAG00000006842	THOC1	99	72.643	Fukomys_damarensis
ENSGMOG00000011486	thoc1	99	87.423	ENSFHEG00000008841	thoc1	99	87.423	Fundulus_heteroclitus
ENSGMOG00000011486	thoc1	99	71.975	ENSGALG00000014915	THOC1	99	71.104	Gallus_gallus
ENSGMOG00000011486	thoc1	99	85.276	ENSGAFG00000021464	thoc1	99	86.169	Gambusia_affinis
ENSGMOG00000011486	thoc1	99	89.724	ENSGACG00000017361	thoc1	99	89.724	Gasterosteus_aculeatus
ENSGMOG00000011486	thoc1	99	74.119	ENSGAGG00000021230	-	97	74.119	Gopherus_agassizii
ENSGMOG00000011486	thoc1	99	71.908	ENSGGOG00000003013	THOC1	98	71.908	Gorilla_gorilla
ENSGMOG00000011486	thoc1	99	89.264	ENSHBUG00000009096	thoc1	99	89.264	Haplochromis_burtoni
ENSGMOG00000011486	thoc1	71	67.164	ENSHGLG00000009264	-	99	67.164	Heterocephalus_glaber_female
ENSGMOG00000011486	thoc1	99	72.824	ENSHGLG00000003712	-	99	72.824	Heterocephalus_glaber_female
ENSGMOG00000011486	thoc1	77	57.292	ENSHGLG00100002225	-	97	59.692	Heterocephalus_glaber_male
ENSGMOG00000011486	thoc1	99	72.672	ENSHGLG00100003570	THOC1	99	72.672	Heterocephalus_glaber_male
ENSGMOG00000011486	thoc1	98	69.099	ENSIPUG00000005306	thoc1	99	67.857	Ictalurus_punctatus
ENSGMOG00000011486	thoc1	99	72.214	ENSSTOG00000006484	THOC1	99	72.214	Ictidomys_tridecemlineatus
ENSGMOG00000011486	thoc1	52	74.269	ENSJJAG00000014893	-	96	74.269	Jaculus_jaculus
ENSGMOG00000011486	thoc1	99	86.656	ENSKMAG00000003904	thoc1	99	86.656	Kryptolebias_marmoratus
ENSGMOG00000011486	thoc1	99	87.730	ENSLBEG00000020372	thoc1	98	87.730	Labrus_bergylta
ENSGMOG00000011486	thoc1	99	73.242	ENSLACG00000014869	THOC1	99	72.936	Latimeria_chalumnae
ENSGMOG00000011486	thoc1	99	81.069	ENSLOCG00000002097	thoc1	99	80.763	Lepisosteus_oculatus
ENSGMOG00000011486	thoc1	99	72.214	ENSLAFG00000009585	THOC1	99	72.214	Loxodonta_africana
ENSGMOG00000011486	thoc1	99	72.214	ENSMFAG00000041520	THOC1	98	72.214	Macaca_fascicularis
ENSGMOG00000011486	thoc1	99	72.214	ENSMMUG00000004662	THOC1	99	72.214	Macaca_mulatta
ENSGMOG00000011486	thoc1	99	72.214	ENSMNEG00000040177	THOC1	98	72.214	Macaca_nemestrina
ENSGMOG00000011486	thoc1	99	72.214	ENSMLEG00000034201	THOC1	98	72.214	Mandrillus_leucophaeus
ENSGMOG00000011486	thoc1	95	86.560	ENSMAMG00000016747	thoc1	99	86.560	Mastacembelus_armatus
ENSGMOG00000011486	thoc1	99	88.957	ENSMZEG00005024609	thoc1	99	88.957	Maylandia_zebra
ENSGMOG00000011486	thoc1	97	72.770	ENSMGAG00000009811	THOC1	99	72.770	Meleagris_gallopavo
ENSGMOG00000011486	thoc1	99	72.086	ENSMAUG00000010272	Thoc1	98	72.086	Mesocricetus_auratus
ENSGMOG00000011486	thoc1	99	72.519	ENSMICG00000027200	THOC1	99	72.519	Microcebus_murinus
ENSGMOG00000011486	thoc1	99	63.190	ENSMOCG00000014924	-	95	62.577	Microtus_ochrogaster
ENSGMOG00000011486	thoc1	99	71.166	ENSMOCG00000014536	-	85	71.166	Microtus_ochrogaster
ENSGMOG00000011486	thoc1	93	88.072	ENSMMOG00000011772	thoc1	100	88.072	Mola_mola
ENSGMOG00000011486	thoc1	99	71.450	ENSMODG00000021482	THOC1	98	71.450	Monodelphis_domestica
ENSGMOG00000011486	thoc1	99	87.883	ENSMALG00000021872	thoc1	99	87.883	Monopterus_albus
ENSGMOG00000011486	thoc1	99	71.472	MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	Mus_caroli
ENSGMOG00000011486	thoc1	99	71.626	ENSMUSG00000024287	Thoc1	98	82.394	Mus_musculus
ENSGMOG00000011486	thoc1	99	71.626	MGP_PahariEiJ_G0018726	Thoc1	98	71.626	Mus_pahari
ENSGMOG00000011486	thoc1	99	71.472	MGP_SPRETEiJ_G0022905	Thoc1	98	71.472	Mus_spretus
ENSGMOG00000011486	thoc1	99	72.061	ENSMPUG00000005448	THOC1	99	72.061	Mustela_putorius_furo
ENSGMOG00000011486	thoc1	60	65.657	ENSMLUG00000024912	-	99	65.657	Myotis_lucifugus
ENSGMOG00000011486	thoc1	90	66.610	ENSMLUG00000027965	-	99	66.610	Myotis_lucifugus
ENSGMOG00000011486	thoc1	99	71.298	ENSMLUG00000004090	-	99	71.298	Myotis_lucifugus
ENSGMOG00000011486	thoc1	97	58.176	ENSNGAG00000008061	-	98	58.059	Nannospalax_galili
ENSGMOG00000011486	thoc1	99	72.214	ENSNGAG00000001401	-	99	72.214	Nannospalax_galili
ENSGMOG00000011486	thoc1	97	87.736	ENSNBRG00000005991	thoc1	97	87.736	Neolamprologus_brichardi
ENSGMOG00000011486	thoc1	99	72.214	ENSNLEG00000006835	THOC1	99	72.214	Nomascus_leucogenys
ENSGMOG00000011486	thoc1	89	77.088	ENSMEUG00000009756	THOC1	82	77.088	Notamacropus_eugenii
ENSGMOG00000011486	thoc1	99	58.015	ENSOPRG00000001108	THOC1	99	58.015	Ochotona_princeps
ENSGMOG00000011486	thoc1	99	67.176	ENSODEG00000006623	THOC1	99	67.176	Octodon_degus
ENSGMOG00000011486	thoc1	99	89.264	ENSONIG00000009440	thoc1	99	88.754	Oreochromis_niloticus
ENSGMOG00000011486	thoc1	99	72.214	ENSOCUG00000011601	THOC1	99	72.214	Oryctolagus_cuniculus
ENSGMOG00000011486	thoc1	99	88.190	ENSORLG00000017629	thoc1	99	88.190	Oryzias_latipes
ENSGMOG00000011486	thoc1	99	88.037	ENSORLG00020007567	thoc1	99	88.037	Oryzias_latipes_hni
ENSGMOG00000011486	thoc1	99	88.190	ENSORLG00015007356	thoc1	99	88.190	Oryzias_latipes_hsok
ENSGMOG00000011486	thoc1	99	86.963	ENSOMEG00000008200	thoc1	99	86.350	Oryzias_melastigma
ENSGMOG00000011486	thoc1	99	69.419	ENSOGAG00000000470	THOC1	99	69.419	Otolemur_garnettii
ENSGMOG00000011486	thoc1	98	73.220	ENSOARG00000009238	THOC1	97	73.220	Ovis_aries
ENSGMOG00000011486	thoc1	99	72.214	ENSPPAG00000031812	THOC1	98	72.214	Pan_paniscus
ENSGMOG00000011486	thoc1	99	71.603	ENSPPRG00000023794	THOC1	96	77.457	Panthera_pardus
ENSGMOG00000011486	thoc1	99	71.603	ENSPTIG00000007469	THOC1	96	77.457	Panthera_tigris_altaica
ENSGMOG00000011486	thoc1	99	71.299	ENSPTRG00000009816	THOC1	99	71.299	Pan_troglodytes
ENSGMOG00000011486	thoc1	99	71.320	ENSPANG00000008665	THOC1	99	71.320	Papio_anubis
ENSGMOG00000011486	thoc1	99	82.236	ENSPKIG00000005906	thoc1	99	82.848	Paramormyrops_kingsleyae
ENSGMOG00000011486	thoc1	80	76.705	ENSPSIG00000007691	THOC1	97	76.705	Pelodiscus_sinensis
ENSGMOG00000011486	thoc1	93	84.065	ENSPMGG00000008279	thoc1	94	84.065	Periophthalmus_magnuspinnatus
ENSGMOG00000011486	thoc1	99	72.086	ENSPEMG00000021789	Thoc1	98	72.086	Peromyscus_maniculatus_bairdii
ENSGMOG00000011486	thoc1	73	72.653	ENSPCIG00000026942	THOC1	97	72.653	Phascolarctos_cinereus
ENSGMOG00000011486	thoc1	99	84.946	ENSPFOG00000011673	thoc1	99	84.816	Poecilia_formosa
ENSGMOG00000011486	thoc1	99	85.429	ENSPLAG00000019648	thoc1	99	85.429	Poecilia_latipinna
ENSGMOG00000011486	thoc1	99	85.100	ENSPMEG00000007083	thoc1	99	84.969	Poecilia_mexicana
ENSGMOG00000011486	thoc1	99	85.736	ENSPREG00000006719	thoc1	99	85.736	Poecilia_reticulata
ENSGMOG00000011486	thoc1	74	75.926	ENSPPYG00000009049	-	98	75.926	Pongo_abelii
ENSGMOG00000011486	thoc1	99	63.206	ENSPCAG00000005320	THOC1	91	73.292	Procavia_capensis
ENSGMOG00000011486	thoc1	99	71.756	ENSPCOG00000009234	THOC1	99	71.756	Propithecus_coquereli
ENSGMOG00000011486	thoc1	99	70.687	ENSPVAG00000004007	THOC1	99	70.687	Pteropus_vampyrus
ENSGMOG00000011486	thoc1	99	89.264	ENSPNYG00000019152	thoc1	99	89.264	Pundamilia_nyererei
ENSGMOG00000011486	thoc1	99	81.288	ENSPNAG00000023390	thoc1	99	80.982	Pygocentrus_nattereri
ENSGMOG00000011486	thoc1	80	59.498	ENSRNOG00000015332	Thoc1	94	59.498	Rattus_norvegicus
ENSGMOG00000011486	thoc1	99	71.450	ENSRBIG00000033738	THOC1	99	74.350	Rhinopithecus_bieti
ENSGMOG00000011486	thoc1	99	72.214	ENSRROG00000044988	THOC1	96	78.363	Rhinopithecus_roxellana
ENSGMOG00000011486	thoc1	99	72.061	ENSSBOG00000016556	THOC1	98	72.061	Saimiri_boliviensis_boliviensis
ENSGMOG00000011486	thoc1	99	72.419	ENSSHAG00000014829	THOC1	98	72.419	Sarcophilus_harrisii
ENSGMOG00000011486	thoc1	99	84.356	ENSSFOG00015021527	thoc1	99	84.356	Scleropages_formosus
ENSGMOG00000011486	thoc1	99	84.969	ENSSMAG00000018465	thoc1	99	84.969	Scophthalmus_maximus
ENSGMOG00000011486	thoc1	99	88.804	ENSSDUG00000016810	thoc1	99	88.804	Seriola_dumerili
ENSGMOG00000011486	thoc1	99	88.650	ENSSLDG00000015555	thoc1	99	88.650	Seriola_lalandi_dorsalis
ENSGMOG00000011486	thoc1	88	72.201	ENSSARG00000006910	THOC1	87	72.201	Sorex_araneus
ENSGMOG00000011486	thoc1	98	72.784	ENSSPUG00000007238	THOC1	98	72.377	Sphenodon_punctatus
ENSGMOG00000011486	thoc1	99	85.015	ENSSPAG00000018847	thoc1	99	85.015	Stegastes_partitus
ENSGMOG00000011486	thoc1	99	72.519	ENSSSCG00000025653	THOC1	93	72.519	Sus_scrofa
ENSGMOG00000011486	thoc1	99	72.588	ENSTGUG00000010204	THOC1	99	72.588	Taeniopygia_guttata
ENSGMOG00000011486	thoc1	99	86.963	ENSTRUG00000013518	thoc1	99	86.963	Takifugu_rubripes
ENSGMOG00000011486	thoc1	99	86.656	ENSTNIG00000008473	thoc1	99	86.656	Tetraodon_nigroviridis
ENSGMOG00000011486	thoc1	99	64.885	ENSTBEG00000016920	THOC1	99	64.885	Tupaia_belangeri
ENSGMOG00000011486	thoc1	99	66.260	ENSTTRG00000016664	THOC1	99	66.260	Tursiops_truncatus
ENSGMOG00000011486	thoc1	99	72.061	ENSUAMG00000002527	THOC1	99	72.061	Ursus_americanus
ENSGMOG00000011486	thoc1	99	72.061	ENSUMAG00000019693	THOC1	99	72.061	Ursus_maritimus
ENSGMOG00000011486	thoc1	67	68.465	ENSVPAG00000003726	-	66	68.465	Vicugna_pacos
ENSGMOG00000011486	thoc1	99	72.214	ENSVVUG00000004384	THOC1	99	72.214	Vulpes_vulpes
ENSGMOG00000011486	thoc1	99	69.453	ENSXETG00000003155	thoc1	97	69.453	Xenopus_tropicalis
ENSGMOG00000011486	thoc1	96	80.569	ENSXCOG00000016085	thoc1	91	80.569	Xiphophorus_couchianus
ENSGMOG00000011486	thoc1	99	86.043	ENSXMAG00000002353	thoc1	99	86.043	Xiphophorus_maculatus