EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000011665 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1249 bases
Position: chrGeneScaffold_1690:51158-52406
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012467	MMR_HSR1	PF01926.23	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000012796	-	633	-	ENSGMOP00000012467	211 (aa)	-	UPI00023F247B

Gene Model

Click here to download ENSGMOG00000011665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000011665	zgc:101559	79	37.725	ENSGMOG00000006450	rab11al	82	37.725
ENSGMOG00000011665	zgc:101559	81	39.181	ENSGMOG00000015096	rab5c	75	39.181
ENSGMOG00000011665	zgc:101559	65	36.496	ENSGMOG00000012623	si:ch73-116o1.2	84	37.584
ENSGMOG00000011665	zgc:101559	70	42.177	ENSGMOG00000016277	RAB15	68	42.177
ENSGMOG00000011665	zgc:101559	63	32.090	ENSGMOG00000018928	rabl2	66	32.090
ENSGMOG00000011665	zgc:101559	73	37.975	ENSGMOG00000020194	rab9b	77	37.975
ENSGMOG00000011665	zgc:101559	70	40.541	ENSGMOG00000006968	-	73	40.541
ENSGMOG00000011665	zgc:101559	80	39.181	ENSGMOG00000013070	rab22a	84	39.181
ENSGMOG00000011665	zgc:101559	84	38.587	ENSGMOG00000004096	-	82	38.587
ENSGMOG00000011665	zgc:101559	80	45.087	ENSGMOG00000010022	-	80	45.087
ENSGMOG00000011665	zgc:101559	79	48.503	ENSGMOG00000002552	rab30	80	48.503
ENSGMOG00000011665	zgc:101559	68	43.056	ENSGMOG00000019073	-	68	43.056
ENSGMOG00000011665	zgc:101559	73	38.994	ENSGMOG00000018475	RAB29	95	38.994
ENSGMOG00000011665	zgc:101559	85	68.156	ENSGMOG00000000885	rab33ba	84	68.156
ENSGMOG00000011665	zgc:101559	55	44.828	ENSGMOG00000016608	rab18b	57	44.828
ENSGMOG00000011665	zgc:101559	78	45.122	ENSGMOG00000004979	-	74	45.122
ENSGMOG00000011665	zgc:101559	71	45.638	ENSGMOG00000004095	rab41	70	45.638
ENSGMOG00000011665	zgc:101559	81	40.351	ENSGMOG00000002868	rab5aa	77	40.351
ENSGMOG00000011665	zgc:101559	84	38.418	ENSGMOG00000008355	rab11a	81	38.418
ENSGMOG00000011665	zgc:101559	84	35.593	ENSGMOG00000010196	hrasb	92	35.593
ENSGMOG00000011665	zgc:101559	72	38.816	ENSGMOG00000018741	-	71	38.816
ENSGMOG00000011665	zgc:101559	70	44.218	ENSGMOG00000003610	rab15	68	44.218
ENSGMOG00000011665	zgc:101559	78	33.537	ENSGMOG00000005102	rab23	74	34.946
ENSGMOG00000011665	zgc:101559	77	43.558	ENSGMOG00000012335	rab12	67	43.558
ENSGMOG00000011665	zgc:101559	78	39.645	ENSGMOG00000011308	-	79	39.645
ENSGMOG00000011665	zgc:101559	78	39.645	ENSGMOG00000014481	rab36	86	39.645
ENSGMOG00000011665	zgc:101559	82	39.884	ENSGMOG00000007390	rab11ba	78	39.884
ENSGMOG00000011665	zgc:101559	73	41.558	ENSGMOG00000006444	rab25b	90	41.558
ENSGMOG00000011665	zgc:101559	73	45.161	ENSGMOG00000008450	-	72	45.161
ENSGMOG00000011665	zgc:101559	80	45.833	ENSGMOG00000004888	rab1ab	82	45.833
ENSGMOG00000011665	zgc:101559	82	39.306	ENSGMOG00000009668	-	78	39.306
ENSGMOG00000011665	zgc:101559	78	37.952	ENSGMOG00000007140	rab34b	79	37.952
ENSGMOG00000011665	zgc:101559	84	68.362	ENSGMOG00000006175	rab33a	80	66.138
ENSGMOG00000011665	zgc:101559	70	42.568	ENSGMOG00000011766	-	94	42.568
ENSGMOG00000011665	zgc:101559	80	45.238	ENSGMOG00000007293	rab1ba	80	45.238
ENSGMOG00000011665	zgc:101559	77	39.264	ENSGMOG00000007127	RAB5A	86	39.264
ENSGMOG00000011665	zgc:101559	78	39.645	ENSGMOG00000007712	RAB7A	78	39.645
ENSGMOG00000011665	zgc:101559	80	45.833	ENSGMOG00000017688	rab35b	87	43.820
ENSGMOG00000011665	zgc:101559	80	40.237	ENSGMOG00000001834	rab4b	79	40.237
ENSGMOG00000011665	zgc:101559	79	39.521	ENSGMOG00000000532	-	75	39.521
ENSGMOG00000011665	zgc:101559	73	41.558	ENSGMOG00000003577	-	76	41.558
ENSGMOG00000011665	zgc:101559	78	33.136	ENSGMOG00000006878	nkiras1	88	33.136
ENSGMOG00000011665	zgc:101559	82	34.483	ENSGMOG00000010581	kras	88	34.483
ENSGMOG00000011665	zgc:101559	71	35.099	ENSGMOG00000017644	si:ch211-247i17.1	85	35.099
ENSGMOG00000011665	zgc:101559	73	37.342	ENSGMOG00000020144	rab9a	77	37.342
ENSGMOG00000011665	zgc:101559	72	35.897	ENSGMOG00000020148	-	81	35.897
ENSGMOG00000011665	zgc:101559	77	38.272	ENSGMOG00000001876	-	91	38.272
ENSGMOG00000011665	zgc:101559	82	40.462	ENSGMOG00000009211	rab11bb	78	40.462
ENSGMOG00000011665	zgc:101559	70	35.135	ENSGMOG00000007564	rhebl1	79	35.135
ENSGMOG00000011665	zgc:101559	74	45.912	ENSGMOG00000010808	RAB39B	74	45.912
ENSGMOG00000011665	zgc:101559	70	35.135	ENSGMOG00000012401	rheb	79	35.135
ENSGMOG00000011665	zgc:101559	73	42.308	ENSGMOG00000015174	si:dkey-16l2.16	93	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011665	zgc:101559	100	82.160	ENSAPOG00000007503	zgc:101559	91	82.160	Acanthochromis_polyacanthus
ENSGMOG00000011665	zgc:101559	95	85.714	ENSACIG00000021459	zgc:101559	89	85.714	Amphilophus_citrinellus
ENSGMOG00000011665	zgc:101559	100	82.629	ENSAOCG00000024675	zgc:101559	91	82.629	Amphiprion_ocellaris
ENSGMOG00000011665	zgc:101559	100	82.629	ENSAPEG00000005176	zgc:101559	91	82.629	Amphiprion_percula
ENSGMOG00000011665	zgc:101559	100	80.751	ENSATEG00000007761	zgc:101559	91	80.751	Anabas_testudineus
ENSGMOG00000011665	zgc:101559	100	83.099	ENSACLG00000027006	zgc:101559	90	83.099	Astatotilapia_calliptera
ENSGMOG00000011665	zgc:101559	100	78.774	ENSAMXG00000040460	zgc:101559	86	78.774	Astyanax_mexicanus
ENSGMOG00000011665	zgc:101559	100	76.995	ENSCSEG00000006243	zgc:101559	91	76.995	Cynoglossus_semilaevis
ENSGMOG00000011665	zgc:101559	99	81.604	ENSCVAG00000019227	zgc:101559	91	81.604	Cyprinodon_variegatus
ENSGMOG00000011665	zgc:101559	100	78.873	ENSDARG00000003257	zgc:101559	91	78.873	Danio_rerio
ENSGMOG00000011665	zgc:101559	99	80.660	ENSFHEG00000011483	zgc:101559	91	80.660	Fundulus_heteroclitus
ENSGMOG00000011665	zgc:101559	99	81.132	ENSGAFG00000021202	zgc:101559	91	81.132	Gambusia_affinis
ENSGMOG00000011665	zgc:101559	100	78.404	ENSGACG00000001725	zgc:101559	91	78.404	Gasterosteus_aculeatus
ENSGMOG00000011665	zgc:101559	100	83.099	ENSHBUG00000007827	zgc:101559	91	83.099	Haplochromis_burtoni
ENSGMOG00000011665	zgc:101559	100	77.209	ENSHCOG00000009133	zgc:101559	91	77.209	Hippocampus_comes
ENSGMOG00000011665	zgc:101559	94	78.894	ENSIPUG00000022394	zgc:101559	86	78.894	Ictalurus_punctatus
ENSGMOG00000011665	zgc:101559	100	79.439	ENSKMAG00000002862	zgc:101559	91	79.439	Kryptolebias_marmoratus
ENSGMOG00000011665	zgc:101559	100	80.751	ENSLBEG00000025798	zgc:101559	91	80.751	Labrus_bergylta
ENSGMOG00000011665	zgc:101559	85	74.302	ENSLACG00000011557	zgc:101559	77	74.302	Latimeria_chalumnae
ENSGMOG00000011665	zgc:101559	100	74.882	ENSLOCG00000005904	zgc:101559	90	74.882	Lepisosteus_oculatus
ENSGMOG00000011665	zgc:101559	100	81.221	ENSMAMG00000017431	zgc:101559	91	81.221	Mastacembelus_armatus
ENSGMOG00000011665	zgc:101559	100	83.099	ENSMZEG00005021778	zgc:101559	91	83.099	Maylandia_zebra
ENSGMOG00000011665	zgc:101559	99	79.717	ENSMMOG00000019779	zgc:101559	91	79.717	Mola_mola
ENSGMOG00000011665	zgc:101559	99	79.717	ENSMALG00000003712	zgc:101559	91	79.717	Monopterus_albus
ENSGMOG00000011665	zgc:101559	100	82.629	ENSNBRG00000002684	zgc:101559	91	82.629	Neolamprologus_brichardi
ENSGMOG00000011665	zgc:101559	100	83.099	ENSONIG00000006715	-	91	83.099	Oreochromis_niloticus
ENSGMOG00000011665	zgc:101559	99	78.302	ENSORLG00000030642	zgc:101559	91	78.302	Oryzias_latipes
ENSGMOG00000011665	zgc:101559	99	78.302	ENSORLG00020012685	zgc:101559	91	78.302	Oryzias_latipes_hni
ENSGMOG00000011665	zgc:101559	99	78.302	ENSORLG00015016047	zgc:101559	91	78.302	Oryzias_latipes_hsok
ENSGMOG00000011665	zgc:101559	99	78.774	ENSOMEG00000013128	zgc:101559	91	78.774	Oryzias_melastigma
ENSGMOG00000011665	zgc:101559	88	82.703	ENSPKIG00000013397	zgc:101559	78	82.703	Paramormyrops_kingsleyae
ENSGMOG00000011665	zgc:101559	99	80.660	ENSPFOG00000009101	-	91	80.660	Poecilia_formosa
ENSGMOG00000011665	zgc:101559	99	80.660	ENSPLAG00000020627	zgc:101559	91	80.660	Poecilia_latipinna
ENSGMOG00000011665	zgc:101559	99	81.132	ENSPMEG00000010152	zgc:101559	91	81.132	Poecilia_mexicana
ENSGMOG00000011665	zgc:101559	99	80.189	ENSPREG00000007017	zgc:101559	91	80.189	Poecilia_reticulata
ENSGMOG00000011665	zgc:101559	100	83.099	ENSPNYG00000012922	zgc:101559	91	83.099	Pundamilia_nyererei
ENSGMOG00000011665	zgc:101559	100	81.132	ENSPNAG00000017856	zgc:101559	92	81.132	Pygocentrus_nattereri
ENSGMOG00000011665	zgc:101559	95	79.310	ENSSFOG00015006175	zgc:101559	87	79.310	Scleropages_formosus
ENSGMOG00000011665	zgc:101559	99	78.095	ENSSMAG00000002229	zgc:101559	89	78.095	Scophthalmus_maximus
ENSGMOG00000011665	zgc:101559	99	82.075	ENSSDUG00000008151	zgc:101559	91	82.075	Seriola_dumerili
ENSGMOG00000011665	zgc:101559	99	81.604	ENSSLDG00000019214	zgc:101559	91	81.604	Seriola_lalandi_dorsalis
ENSGMOG00000011665	zgc:101559	100	83.568	ENSSPAG00000006404	zgc:101559	91	83.568	Stegastes_partitus
ENSGMOG00000011665	zgc:101559	99	78.302	ENSTRUG00000009903	zgc:101559	91	78.302	Takifugu_rubripes
ENSGMOG00000011665	zgc:101559	90	81.579	ENSTNIG00000015000	zgc:101559	83	79.082	Tetraodon_nigroviridis
ENSGMOG00000011665	zgc:101559	99	80.660	ENSXCOG00000018683	zgc:101559	91	80.660	Xiphophorus_couchianus
ENSGMOG00000011665	zgc:101559	99	81.132	ENSXMAG00000011171	zgc:101559	91	81.132	Xiphophorus_maculatus