EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000011715 (Gene tree)
Gene ID: -
Gene Symbol: chd6
Alias: si:dkey-6e2.3|zmp:0000000556
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 37955 bases
Position: chrGeneScaffold_1922:94374-132328
Accession: ZDB-GENE-130530-559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012569	ResIII	PF04851.15	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000012901	-	7089	-	ENSGMOP00000012569	2363 (aa)	-	UPI00023F2497

Gene Model

Click here to download ENSGMOG00000011715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000011715	chd6	50	72.980	ENSGMOG00000004232	chd7	75	64.151
ENSGMOG00000011715	chd6	58	60.992	ENSGMOG00000006040	chd9	58	61.322
ENSGMOG00000011715	chd6	56	53.841	ENSGMOG00000015075	chd8	66	54.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011715	chd6	85	69.693	ENSG00000124177	CHD6	92	78.603	Homo_sapiens
ENSGMOG00000011715	chd6	89	83.405	ENSAPOG00000013736	chd6	60	83.405	Acanthochromis_polyacanthus
ENSGMOG00000011715	chd6	85	69.407	ENSAMEG00000009496	CHD6	73	69.264	Ailuropoda_melanoleuca
ENSGMOG00000011715	chd6	86	83.492	ENSATEG00000005608	chd6	62	77.622	Anabas_testudineus
ENSGMOG00000011715	chd6	80	69.979	ENSAPLG00000015592	CHD6	74	69.907	Anas_platyrhynchos
ENSGMOG00000011715	chd6	80	70.744	ENSACAG00000006842	CHD6	69	70.579	Anolis_carolinensis
ENSGMOG00000011715	chd6	85	69.712	ENSANAG00000037548	CHD6	89	83.197	Aotus_nancymaae
ENSGMOG00000011715	chd6	88	74.337	ENSAMXG00000009576	chd6	71	74.337	Astyanax_mexicanus
ENSGMOG00000011715	chd6	85	70.523	ENSBTAG00000005733	CHD6	71	69.550	Bos_taurus
ENSGMOG00000011715	chd6	85	69.640	ENSCJAG00000017920	CHD6	89	82.992	Callithrix_jacchus
ENSGMOG00000011715	chd6	86	69.478	ENSCAFG00000009236	CHD6	73	69.335	Canis_familiaris
ENSGMOG00000011715	chd6	86	70.210	ENSCAFG00020012906	CHD6	89	82.510	Canis_lupus_dingo
ENSGMOG00000011715	chd6	84	71.290	ENSCHIG00000017606	CHD6	71	70.282	Capra_hircus
ENSGMOG00000011715	chd6	73	73.222	ENSTSYG00000014635	CHD6	76	73.047	Carlito_syrichta
ENSGMOG00000011715	chd6	84	69.192	ENSCPOG00000015641	CHD6	73	69.049	Cavia_porcellus
ENSGMOG00000011715	chd6	84	69.706	ENSCCAG00000036828	CHD6	89	83.197	Cebus_capucinus
ENSGMOG00000011715	chd6	85	70.022	ENSCATG00000039248	CHD6	89	83.197	Cercocebus_atys
ENSGMOG00000011715	chd6	85	69.407	ENSCLAG00000013743	CHD6	73	69.264	Chinchilla_lanigera
ENSGMOG00000011715	chd6	82	70.523	ENSCSAG00000013997	CHD6	73	69.478	Chlorocebus_sabaeus
ENSGMOG00000011715	chd6	65	71.851	ENSCHOG00000012647	CHD6	57	71.664	Choloepus_hoffmanni
ENSGMOG00000011715	chd6	84	70.723	ENSCPBG00000019382	CHD6	73	70.723	Chrysemys_picta_bellii
ENSGMOG00000011715	chd6	85	69.856	ENSCANG00000043435	CHD6	89	83.197	Colobus_angolensis_palliatus
ENSGMOG00000011715	chd6	85	69.407	ENSCGRG00001002694	Chd6	73	69.264	Cricetulus_griseus_chok1gshd
ENSGMOG00000011715	chd6	87	75.575	ENSDARG00000017244	chd6	73	75.018	Danio_rerio
ENSGMOG00000011715	chd6	84	69.643	ENSDNOG00000004176	CHD6	74	69.494	Dasypus_novemcinctus
ENSGMOG00000011715	chd6	84	71.290	ENSEASG00005023433	CHD6	89	84.568	Equus_asinus_asinus
ENSGMOG00000011715	chd6	84	70.597	ENSECAG00000011761	CHD6	73	69.478	Equus_caballus
ENSGMOG00000011715	chd6	77	80.333	ENSELUG00000012309	chd6	84	80.333	Esox_lucius
ENSGMOG00000011715	chd6	87	69.407	ENSFCAG00000003572	CHD6	75	69.264	Felis_catus
ENSGMOG00000011715	chd6	82	71.018	ENSFALG00000012563	CHD6	71	70.136	Ficedula_albicollis
ENSGMOG00000011715	chd6	84	69.550	ENSFDAG00000013791	CHD6	73	69.407	Fukomys_damarensis
ENSGMOG00000011715	chd6	91	79.173	ENSGACG00000000037	chd6	88	79.672	Gasterosteus_aculeatus
ENSGMOG00000011715	chd6	85	69.928	ENSGGOG00000013123	CHD6	89	83.197	Gorilla_gorilla
ENSGMOG00000011715	chd6	89	83.492	ENSHBUG00000014701	chd6	63	83.492	Haplochromis_burtoni
ENSGMOG00000011715	chd6	85	69.407	ENSHGLG00000004548	CHD6	73	69.264	Heterocephalus_glaber_female
ENSGMOG00000011715	chd6	85	69.407	ENSHGLG00100006401	CHD6	73	69.264	Heterocephalus_glaber_male
ENSGMOG00000011715	chd6	90	74.841	ENSIPUG00000003692	chd6	75	74.699	Ictalurus_punctatus
ENSGMOG00000011715	chd6	85	69.621	ENSSTOG00000013382	CHD6	73	69.478	Ictidomys_tridecemlineatus
ENSGMOG00000011715	chd6	83	70.264	ENSLACG00000010881	CHD6	71	69.979	Latimeria_chalumnae
ENSGMOG00000011715	chd6	79	74.891	ENSLOCG00000007386	chd6	73	74.482	Lepisosteus_oculatus
ENSGMOG00000011715	chd6	85	69.836	ENSLAFG00000012144	CHD6	74	69.693	Loxodonta_africana
ENSGMOG00000011715	chd6	85	69.935	ENSMFAG00000032830	CHD6	89	83.197	Macaca_fascicularis
ENSGMOG00000011715	chd6	85	69.550	ENSMMUG00000020458	CHD6	89	83.197	Macaca_mulatta
ENSGMOG00000011715	chd6	85	69.935	ENSMNEG00000040847	CHD6	89	83.197	Macaca_nemestrina
ENSGMOG00000011715	chd6	85	69.935	ENSMLEG00000031965	CHD6	89	83.197	Mandrillus_leucophaeus
ENSGMOG00000011715	chd6	89	83.824	ENSMAMG00000013111	chd6	65	79.219	Mastacembelus_armatus
ENSGMOG00000011715	chd6	89	69.107	ENSMGAG00000001121	CHD6	78	68.214	Meleagris_gallopavo
ENSGMOG00000011715	chd6	84	70.818	ENSMICG00000016641	CHD6	89	83.402	Microcebus_murinus
ENSGMOG00000011715	chd6	76	73.719	ENSMODG00000000720	-	74	73.719	Monodelphis_domestica
ENSGMOG00000011715	chd6	85	69.407	MGP_CAROLIEiJ_G0024604	Chd6	85	74.975	Mus_caroli
ENSGMOG00000011715	chd6	84	69.478	ENSMUSG00000057133	Chd6	85	75.074	Mus_musculus
ENSGMOG00000011715	chd6	85	69.192	MGP_PahariEiJ_G0026048	Chd6	85	74.876	Mus_pahari
ENSGMOG00000011715	chd6	85	69.478	MGP_SPRETEiJ_G0025526	Chd6	85	75.074	Mus_spretus
ENSGMOG00000011715	chd6	86	69.258	ENSMPUG00000017695	CHD6	73	69.258	Mustela_putorius_furo
ENSGMOG00000011715	chd6	84	70.376	ENSMLUG00000016247	CHD6	73	69.264	Myotis_lucifugus
ENSGMOG00000011715	chd6	90	80.680	ENSNBRG00000013839	chd6	78	84.677	Neolamprologus_brichardi
ENSGMOG00000011715	chd6	85	68.948	ENSNLEG00000006496	CHD6	73	68.908	Nomascus_leucogenys
ENSGMOG00000011715	chd6	85	67.477	ENSOPRG00000013376	-	73	67.477	Ochotona_princeps
ENSGMOG00000011715	chd6	91	77.205	ENSONIG00000000393	chd6	78	80.157	Oreochromis_niloticus
ENSGMOG00000011715	chd6	67	68.553	ENSOANG00000014347	CHD6	59	68.553	Ornithorhynchus_anatinus
ENSGMOG00000011715	chd6	85	69.621	ENSOCUG00000012394	CHD6	73	69.621	Oryctolagus_cuniculus
ENSGMOG00000011715	chd6	86	81.850	ENSORLG00020021891	chd6	90	90.000	Oryzias_latipes_hni
ENSGMOG00000011715	chd6	82	70.671	ENSOGAG00000002427	CHD6	73	69.550	Otolemur_garnettii
ENSGMOG00000011715	chd6	84	69.665	ENSOARG00000002597	CHD6	60	68.709	Ovis_aries
ENSGMOG00000011715	chd6	86	69.478	ENSPPRG00000014756	CHD6	73	69.335	Panthera_pardus
ENSGMOG00000011715	chd6	86	69.407	ENSPTIG00000011094	CHD6	74	69.264	Panthera_tigris_altaica
ENSGMOG00000011715	chd6	85	70.058	ENSPTRG00000013504	CHD6	89	83.197	Pan_troglodytes
ENSGMOG00000011715	chd6	85	70.210	ENSPANG00000025554	CHD6	89	83.197	Papio_anubis
ENSGMOG00000011715	chd6	87	75.092	ENSPKIG00000005578	chd6	73	75.746	Paramormyrops_kingsleyae
ENSGMOG00000011715	chd6	89	78.069	ENSPMGG00000014877	chd6	84	76.657	Periophthalmus_magnuspinnatus
ENSGMOG00000011715	chd6	85	69.821	ENSPCIG00000028037	CHD6	73	69.677	Phascolarctos_cinereus
ENSGMOG00000011715	chd6	88	82.126	ENSPLAG00000003128	chd6	64	82.212	Poecilia_latipinna
ENSGMOG00000011715	chd6	86	82.609	ENSPREG00000022653	chd6	89	90.722	Poecilia_reticulata
ENSGMOG00000011715	chd6	85	69.693	ENSPPYG00000011016	CHD6	73	69.550	Pongo_abelii
ENSGMOG00000011715	chd6	82	70.671	ENSPCOG00000001089	CHD6	89	83.197	Propithecus_coquereli
ENSGMOG00000011715	chd6	91	80.472	ENSPNYG00000022516	chd6	79	80.401	Pundamilia_nyererei
ENSGMOG00000011715	chd6	87	72.340	ENSPNAG00000012825	chd6	72	72.340	Pygocentrus_nattereri
ENSGMOG00000011715	chd6	85	69.325	ENSRNOG00000016744	Chd6	73	69.181	Rattus_norvegicus
ENSGMOG00000011715	chd6	84	69.784	ENSSBOG00000022089	CHD6	89	83.197	Saimiri_boliviensis_boliviensis
ENSGMOG00000011715	chd6	85	69.907	ENSSHAG00000017072	CHD6	73	69.764	Sarcophilus_harrisii
ENSGMOG00000011715	chd6	87	75.815	ENSSFOG00015012920	chd6	74	75.815	Scleropages_formosus
ENSGMOG00000011715	chd6	62	91.447	ENSSARG00000002615	-	53	91.447	Sorex_araneus
ENSGMOG00000011715	chd6	84	70.892	ENSSSCG00000007360	CHD6	72	69.764	Sus_scrofa
ENSGMOG00000011715	chd6	85	71.196	ENSTGUG00000003179	CHD6	77	70.237	Taeniopygia_guttata
ENSGMOG00000011715	chd6	87	76.436	ENSTNIG00000017487	chd6	85	76.510	Tetraodon_nigroviridis
ENSGMOG00000011715	chd6	79	77.277	ENSTTRG00000013438	CHD6	67	75.847	Tursiops_truncatus
ENSGMOG00000011715	chd6	83	68.709	ENSUAMG00000024036	CHD6	89	82.510	Ursus_americanus
ENSGMOG00000011715	chd6	83	70.239	ENSUMAG00000002017	CHD6	89	82.510	Ursus_maritimus
ENSGMOG00000011715	chd6	77	64.260	ENSVPAG00000007941	CHD6	67	64.189	Vicugna_pacos
ENSGMOG00000011715	chd6	86	69.478	ENSVVUG00000029164	CHD6	73	69.335	Vulpes_vulpes
ENSGMOG00000011715	chd6	82	62.250	ENSXETG00000021445	chd6	71	61.219	Xenopus_tropicalis