EuRBPDB

Description
Ensembl ID
ENSGMOG00000011797 (Gene tree)
Gene ID
-
Gene Symbol
prdm12b
Alias
zgc:101606
Full Name
PR domain containing 12b
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
3816 bases
Position
chrGeneScaffold_3491:351536-355351
Accession
ZDB-GENE-041114-172
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSGMOP00000012626zf-C2H2PF00096.265.2e-1312
ENSGMOP00000012626zf-C2H2PF00096.265.2e-1322
ENSGMOP00000012620zf-C2H2PF00096.265.2e-1312
ENSGMOP00000012620zf-C2H2PF00096.265.2e-1322
ENSGMOP00000012620zf-metPF12874.74.3e-0711
ENSGMOP00000012626zf-metPF12874.75.1e-0711
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSGMOT00000012954-1068-ENSGMOP00000012620355 (aa)-UPI00023F2A74
ENSGMOT00000012960-1119-ENSGMOP00000012626372 (aa)-UPI00023F2A75
Gene Model
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSGMOG00000011797prdm12b7780.836ENSGMOG00000002701-9982.578
ENSGMOG00000011797prdm12b7245.161ENSGMOG00000012038prdm57341.892
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSGMOG00000011797prdm12b9481.682ENSG00000130711PRDM129081.682Homo_sapiens
ENSGMOG00000011797prdm12b9966.213ENSAPOG00000018234-10064.829Acanthochromis_polyacanthus
ENSGMOG00000011797prdm12b10082.474ENSAPOG00000016051prdm12b10083.548Acanthochromis_polyacanthus
ENSGMOG00000011797prdm12b9182.407ENSAMEG00000016234PRDM129982.716Ailuropoda_melanoleuca
ENSGMOG00000011797prdm12b10077.635ENSACIG00000005193-10077.121Amphilophus_citrinellus
ENSGMOG00000011797prdm12b10082.292ENSACIG00000019578prdm12b10083.333Amphilophus_citrinellus
ENSGMOG00000011797prdm12b10082.552ENSAOCG00000015040prdm12b10083.636Amphiprion_ocellaris
ENSGMOG00000011797prdm12b10072.610ENSAPEG00000022849-9973.385Amphiprion_percula
ENSGMOG00000011797prdm12b10083.202ENSAPEG00000015092prdm12b10084.293Amphiprion_percula
ENSGMOG00000011797prdm12b10078.442ENSATEG00000014595-9685.061Anabas_testudineus
ENSGMOG00000011797prdm12b9680.882ENSANAG00000020616PRDM129881.982Aotus_nancymaae
ENSGMOG00000011797prdm12b10077.411ENSACLG00000007631-10077.665Astatotilapia_calliptera
ENSGMOG00000011797prdm12b9984.848ENSACLG00000011876prdm12b10082.353Astatotilapia_calliptera
ENSGMOG00000011797prdm12b9685.588ENSAMXG00000008540PRDM129087.385Astyanax_mexicanus
ENSGMOG00000011797prdm12b10080.739ENSAMXG00000033665prdm12b10083.110Astyanax_mexicanus
ENSGMOG00000011797prdm12b9482.282ENSBTAG00000023797PRDM129282.282Bos_taurus
ENSGMOG00000011797prdm12b9481.982ENSCJAG00000020540PRDM129978.611Callithrix_jacchus
ENSGMOG00000011797prdm12b8283.162ENSCAFG00000023076PRDM129083.162Canis_familiaris
ENSGMOG00000011797prdm12b9482.282ENSCAFG00020024046PRDM129182.282Canis_lupus_dingo
ENSGMOG00000011797prdm12b9482.282ENSCHIG00000025005PRDM129282.282Capra_hircus
ENSGMOG00000011797prdm12b8882.428ENSCPOG00000005901PRDM129582.650Cavia_porcellus
ENSGMOG00000011797prdm12b9481.982ENSCCAG00000037485PRDM129181.982Cebus_capucinus
ENSGMOG00000011797prdm12b9481.982ENSCATG00000020327PRDM129181.982Cercocebus_atys
ENSGMOG00000011797prdm12b9481.682ENSCLAG00000005499PRDM129181.682Chinchilla_lanigera
ENSGMOG00000011797prdm12b9481.982ENSCSAG00000014756PRDM129181.982Chlorocebus_sabaeus
ENSGMOG00000011797prdm12b9981.356ENSCPBG00000022628PRDM129981.356Chrysemys_picta_bellii
ENSGMOG00000011797prdm12b9482.282ENSCGRG00001015005Prdm129182.282Cricetulus_griseus_chok1gshd
ENSGMOG00000011797prdm12b10075.385ENSCVAG00000000944-10075.385Cyprinodon_variegatus
ENSGMOG00000011797prdm12b10083.158ENSCVAG00000017166prdm12b10083.820Cyprinodon_variegatus
ENSGMOG00000011797prdm12b10083.871ENSDARG00000007430prdm12b10083.871Danio_rerio
ENSGMOG00000011797prdm12b9481.737ENSDNOG00000042302PRDM129281.737Dasypus_novemcinctus
ENSGMOG00000011797prdm12b8765.179ENSEBUG00000016780prdm12b7367.674Eptatretus_burgeri
ENSGMOG00000011797prdm12b9681.176ENSEASG00005008472PRDM129282.282Equus_asinus_asinus
ENSGMOG00000011797prdm12b9680.882ENSECAG00000005933PRDM129281.982Equus_caballus
ENSGMOG00000011797prdm12b9486.787ENSELUG00000013674PRDM1210081.443Esox_lucius
ENSGMOG00000011797prdm12b10082.133ENSELUG00000009905prdm12b10082.133Esox_lucius
ENSGMOG00000011797prdm12b9482.282ENSFCAG00000043086PRDM129182.282Felis_catus
ENSGMOG00000011797prdm12b9981.921ENSFALG00000001445PRDM128981.921Ficedula_albicollis
ENSGMOG00000011797prdm12b10081.316ENSFHEG00000003944prdm12b10082.632Fundulus_heteroclitus
ENSGMOG00000011797prdm12b10075.959ENSFHEG00000007746-10075.448Fundulus_heteroclitus
ENSGMOG00000011797prdm12b9981.921ENSGALG00000003895PRDM129981.921Gallus_gallus
ENSGMOG00000011797prdm12b10082.152ENSGAFG00000010827prdm12b9982.493Gambusia_affinis
ENSGMOG00000011797prdm12b10084.737ENSGACG00000016713prdm12b9984.392Gasterosteus_aculeatus
ENSGMOG00000011797prdm12b9981.356ENSGAGG00000014083PRDM129981.356Gopherus_agassizii
ENSGMOG00000011797prdm12b9481.381ENSGGOG00000010568PRDM129181.381Gorilla_gorilla
ENSGMOG00000011797prdm12b10083.246ENSHBUG00000022878prdm12b10082.461Haplochromis_burtoni
ENSGMOG00000011797prdm12b10077.411ENSHBUG00000022537-9377.665Haplochromis_burtoni
ENSGMOG00000011797prdm12b9382.675ENSHGLG00000013939PRDM128983.283Heterocephalus_glaber_female
ENSGMOG00000011797prdm12b9285.088ENSHCOG00000003663prdm12b8785.088Hippocampus_comes
ENSGMOG00000011797prdm12b9973.554ENSHCOG00000021167-9375.749Hippocampus_comes
ENSGMOG00000011797prdm12b10080.429ENSIPUG00000017053prdm12b10081.769Ictalurus_punctatus
ENSGMOG00000011797prdm12b10078.763ENSIPUG00000019544PRDM1210078.763Ictalurus_punctatus
ENSGMOG00000011797prdm12b9979.429ENSSTOG00000005986PRDM128782.282Ictidomys_tridecemlineatus
ENSGMOG00000011797prdm12b9382.979ENSJJAG00000005424Prdm129883.587Jaculus_jaculus
ENSGMOG00000011797prdm12b9481.065ENSKMAG00000021205-8685.993Kryptolebias_marmoratus
ENSGMOG00000011797prdm12b10076.733ENSKMAG00000016921prdm12b10077.723Kryptolebias_marmoratus
ENSGMOG00000011797prdm12b10085.564ENSLBEG00000017769prdm12b8891.018Labrus_bergylta
ENSGMOG00000011797prdm12b10077.895ENSLBEG00000007776-10078.684Labrus_bergylta
ENSGMOG00000011797prdm12b10081.972ENSLACG00000017560PRDM1210081.972Latimeria_chalumnae
ENSGMOG00000011797prdm12b10081.989ENSLOCG00000005429prdm12b9982.796Lepisosteus_oculatus
ENSGMOG00000011797prdm12b9481.065ENSLAFG00000006979PRDM129181.065Loxodonta_africana
ENSGMOG00000011797prdm12b9481.982ENSMFAG00000040322PRDM129081.982Macaca_fascicularis
ENSGMOG00000011797prdm12b9481.982ENSMNEG00000037234PRDM129181.982Macaca_nemestrina
ENSGMOG00000011797prdm12b10084.211ENSMAMG00000013212prdm12b10084.293Mastacembelus_armatus
ENSGMOG00000011797prdm12b9580.172ENSMAMG00000018988-8682.196Mastacembelus_armatus
ENSGMOG00000011797prdm12b10077.020ENSMZEG00005000415PRDM1210077.273Maylandia_zebra
ENSGMOG00000011797prdm12b9683.041ENSMGAG00000005438PRDM129484.084Meleagris_gallopavo
ENSGMOG00000011797prdm12b9681.232ENSMAUG00000013040Prdm129182.282Mesocricetus_auratus
ENSGMOG00000011797prdm12b9680.938ENSMICG00000015480PRDM129282.282Microcebus_murinus
ENSGMOG00000011797prdm12b9979.772ENSMOCG00000021026Prdm129182.583Microtus_ochrogaster
ENSGMOG00000011797prdm12b9981.408ENSMODG00000012108PRDM129981.127Monodelphis_domestica
ENSGMOG00000011797prdm12b10070.161ENSMALG00000021901prdm12b8875.976Monopterus_albus
ENSGMOG00000011797prdm12b9481.982MGP_CAROLIEiJ_G0023414Prdm129181.982Mus_caroli
ENSGMOG00000011797prdm12b9481.982ENSMUSG00000079466Prdm129181.982Mus_musculus
ENSGMOG00000011797prdm12b9481.982MGP_PahariEiJ_G0024871Prdm129181.982Mus_pahari
ENSGMOG00000011797prdm12b9481.982MGP_SPRETEiJ_G0024331Prdm129181.982Mus_spretus
ENSGMOG00000011797prdm12b9283.692ENSNGAG00000018480Prdm129283.283Nannospalax_galili
ENSGMOG00000011797prdm12b10081.558ENSNBRG00000006727prdm12b10083.377Neolamprologus_brichardi
ENSGMOG00000011797prdm12b9975.549ENSNBRG00000024312-9380.000Neolamprologus_brichardi
ENSGMOG00000011797prdm12b9972.958ENSMEUG00000003828PRDM129972.676Notamacropus_eugenii
ENSGMOG00000011797prdm12b9382.979ENSOPRG00000008680PRDM129883.587Ochotona_princeps
ENSGMOG00000011797prdm12b9780.758ENSODEG00000016282PRDM126183.283Octodon_degus
ENSGMOG00000011797prdm12b6179.358ENSOANG00000001043PRDM1210079.358Ornithorhynchus_anatinus
ENSGMOG00000011797prdm12b8583.667ENSOCUG00000008241PRDM129684.211Oryctolagus_cuniculus
ENSGMOG00000011797prdm12b10081.959ENSORLG00000007114prdm12b9982.292Oryzias_latipes
ENSGMOG00000011797prdm12b10076.410ENSORLG00000017558-10076.154Oryzias_latipes
ENSGMOG00000011797prdm12b10076.215ENSORLG00020013167-10075.959Oryzias_latipes_hni
ENSGMOG00000011797prdm12b10081.771ENSORLG00020019565prdm12b9983.333Oryzias_latipes_hni
ENSGMOG00000011797prdm12b10076.154ENSORLG00015003435-10075.897Oryzias_latipes_hsok
ENSGMOG00000011797prdm12b10081.771ENSORLG00015007621prdm12b9982.812Oryzias_latipes_hsok
ENSGMOG00000011797prdm12b9976.984ENSOMEG00000007762-10075.128Oryzias_melastigma
ENSGMOG00000011797prdm12b10080.879ENSOMEG00000004134prdm12b9981.912Oryzias_melastigma
ENSGMOG00000011797prdm12b9482.282ENSOGAG00000007557PRDM129982.282Otolemur_garnettii
ENSGMOG00000011797prdm12b8379.522ENSPPAG00000031506-9980.135Pan_paniscus
ENSGMOG00000011797prdm12b9874.212ENSPPRG00000023024PRDM128575.749Panthera_pardus
ENSGMOG00000011797prdm12b9481.682ENSPTRG00000021475PRDM129181.682Pan_troglodytes
ENSGMOG00000011797prdm12b9481.682ENSPTRG00000043324-9181.682Pan_troglodytes
ENSGMOG00000011797prdm12b9481.982ENSPANG00000025967PRDM129181.982Papio_anubis
ENSGMOG00000011797prdm12b10081.481ENSPKIG00000007228prdm12b10082.804Paramormyrops_kingsleyae
ENSGMOG00000011797prdm12b9779.827ENSPKIG00000004305PRDM129880.117Paramormyrops_kingsleyae
ENSGMOG00000011797prdm12b9981.073ENSPSIG00000006739PRDM129981.073Pelodiscus_sinensis
ENSGMOG00000011797prdm12b9381.791ENSPMGG00000002356-8682.727Periophthalmus_magnuspinnatus
ENSGMOG00000011797prdm12b10082.713ENSPMGG00000008867prdm12b9983.245Periophthalmus_magnuspinnatus
ENSGMOG00000011797prdm12b9980.286ENSPEMG00000009969Prdm128983.891Peromyscus_maniculatus_bairdii
ENSGMOG00000011797prdm12b9981.408ENSPCIG00000024119PRDM129981.127Phascolarctos_cinereus
ENSGMOG00000011797prdm12b10081.984ENSPFOG00000019841prdm12b10082.850Poecilia_formosa
ENSGMOG00000011797prdm12b10082.632ENSPLAG00000016626prdm12b9186.325Poecilia_latipinna
ENSGMOG00000011797prdm12b9881.941ENSPMEG00000016698prdm12b10081.250Poecilia_mexicana
ENSGMOG00000011797prdm12b9079.456ENSPREG00000003211-8383.721Poecilia_reticulata
ENSGMOG00000011797prdm12b10081.890ENSPREG00000015073prdm12b9186.040Poecilia_reticulata
ENSGMOG00000011797prdm12b9680.352ENSPPYG00000019694PRDM129283.587Pongo_abelii
ENSGMOG00000011797prdm12b9482.282ENSPCOG00000022255PRDM129182.282Propithecus_coquereli
ENSGMOG00000011797prdm12b9482.282ENSPVAG00000001511PRDM129182.282Pteropus_vampyrus
ENSGMOG00000011797prdm12b9983.957ENSPNYG00000009607prdm12b10082.812Pundamilia_nyererei
ENSGMOG00000011797prdm12b10077.020ENSPNYG00000013589-10077.273Pundamilia_nyererei
ENSGMOG00000011797prdm12b9284.592ENSPNAG00000013396PRDM128884.545Pygocentrus_nattereri
ENSGMOG00000011797prdm12b10081.167ENSPNAG00000024532prdm12b10083.646Pygocentrus_nattereri
ENSGMOG00000011797prdm12b9481.982ENSRNOG00000009218Prdm129181.982Rattus_norvegicus
ENSGMOG00000011797prdm12b9580.178ENSRBIG00000042712PRDM128882.769Rhinopithecus_bieti
ENSGMOG00000011797prdm12b9083.178ENSRROG00000043554PRDM129983.692Rhinopithecus_roxellana
ENSGMOG00000011797prdm12b9980.899ENSSHAG00000015972PRDM129980.618Sarcophilus_harrisii
ENSGMOG00000011797prdm12b9385.836ENSSMAG00000003754prdm12b9583.777Scophthalmus_maximus
ENSGMOG00000011797prdm12b10081.934ENSSDUG00000023498prdm12b10081.586Seriola_dumerili
ENSGMOG00000011797prdm12b10078.385ENSSDUG00000019071-10078.385Seriola_dumerili
ENSGMOG00000011797prdm12b10083.077ENSSLDG00000009557prdm12b10082.732Seriola_lalandi_dorsalis
ENSGMOG00000011797prdm12b9979.832ENSSLDG00000013562-9384.356Seriola_lalandi_dorsalis
ENSGMOG00000011797prdm12b9981.638ENSSPUG00000013424PRDM129981.638Sphenodon_punctatus
ENSGMOG00000011797prdm12b10070.543ENSSPAG00000022420-10072.149Stegastes_partitus
ENSGMOG00000011797prdm12b10081.039ENSSPAG00000018824prdm12b10082.383Stegastes_partitus
ENSGMOG00000011797prdm12b9482.282ENSSSCG00000005703PRDM129182.282Sus_scrofa
ENSGMOG00000011797prdm12b10083.245ENSTRUG00000018659prdm12b10083.905Takifugu_rubripes
ENSGMOG00000011797prdm12b10077.249ENSTRUG00000013239-9384.084Takifugu_rubripes
ENSGMOG00000011797prdm12b10083.469ENSTNIG00000009020prdm12b9088.822Tetraodon_nigroviridis
ENSGMOG00000011797prdm12b9976.667ENSTNIG00000005859-9280.547Tetraodon_nigroviridis
ENSGMOG00000011797prdm12b9482.282ENSUAMG00000009653PRDM129282.282Ursus_americanus
ENSGMOG00000011797prdm12b9382.979ENSVVUG00000027662PRDM127783.891Vulpes_vulpes
ENSGMOG00000011797prdm12b10082.058ENSXCOG00000002836prdm12b9982.895Xiphophorus_couchianus
ENSGMOG00000011797prdm12b10082.850ENSXMAG00000005537prdm12b10083.684Xiphophorus_maculatus
ENSGMOG00000011797prdm12b10075.258ENSXMAG00000028012-10075.000Xiphophorus_maculatus