EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000011950 (Gene tree)
Gene ID: -
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 10187 bases
Position: chrGeneScaffold_4591:13955-24141
Accession: 10774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012785	RRM_1	PF00076.22	5.8e-31	1	2
ENSGMOP00000012785	RRM_1	PF00076.22	5.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013123	SFPQ-201	1698	-	ENSGMOP00000012785	565 (aa)	-	UPI00023F2643

Gene Model

Click here to download ENSGMOG00000011950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000011950	SFPQ	72	54.378	ENSGMOG00000015074	pspc1	81	56.265
ENSGMOG00000011950	SFPQ	100	78.915	ENSGMOG00000011957	sfpq	100	80.901

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011950	SFPQ	84	64.808	ENSG00000116560	SFPQ	89	76.000	Homo_sapiens
ENSGMOG00000011950	SFPQ	99	85.885	ENSAPOG00000024257	sfpq	79	85.646	Acanthochromis_polyacanthus
ENSGMOG00000011950	SFPQ	74	75.000	ENSAMEG00000000815	SFPQ	98	75.463	Ailuropoda_melanoleuca
ENSGMOG00000011950	SFPQ	99	73.693	ENSACIG00000000905	sfpq	99	73.524	Amphilophus_citrinellus
ENSGMOG00000011950	SFPQ	99	86.124	ENSAOCG00000002889	sfpq	77	85.885	Amphiprion_ocellaris
ENSGMOG00000011950	SFPQ	99	86.124	ENSAPEG00000016556	sfpq	77	85.885	Amphiprion_percula
ENSGMOG00000011950	SFPQ	89	78.501	ENSATEG00000002981	sfpq	88	87.886	Anabas_testudineus
ENSGMOG00000011950	SFPQ	60	56.125	ENSANAG00000037798	-	99	55.840	Aotus_nancymaae
ENSGMOG00000011950	SFPQ	70	66.341	ENSANAG00000027438	-	64	65.909	Aotus_nancymaae
ENSGMOG00000011950	SFPQ	60	51.136	ENSANAG00000021268	-	100	53.693	Aotus_nancymaae
ENSGMOG00000011950	SFPQ	99	84.248	ENSACLG00000022332	sfpq	83	84.248	Astatotilapia_calliptera
ENSGMOG00000011950	SFPQ	80	76.559	ENSAMXG00000011538	sfpq	75	72.837	Astyanax_mexicanus
ENSGMOG00000011950	SFPQ	74	75.000	ENSBTAG00000016328	SFPQ	61	74.943	Bos_taurus
ENSGMOG00000011950	SFPQ	74	75.000	ENSCJAG00000001431	SFPQ	61	74.943	Callithrix_jacchus
ENSGMOG00000011950	SFPQ	75	70.022	ENSCAFG00000018271	-	65	71.034	Canis_familiaris
ENSGMOG00000011950	SFPQ	74	70.302	ENSCAFG00000017608	-	63	70.960	Canis_familiaris
ENSGMOG00000011950	SFPQ	74	75.000	ENSCAFG00000003595	-	66	74.943	Canis_familiaris
ENSGMOG00000011950	SFPQ	75	70.022	ENSCAFG00020004881	-	65	71.034	Canis_lupus_dingo
ENSGMOG00000011950	SFPQ	60	66.761	ENSCAFG00020010702	-	100	66.761	Canis_lupus_dingo
ENSGMOG00000011950	SFPQ	74	75.000	ENSCHIG00000023097	SFPQ	61	74.943	Capra_hircus
ENSGMOG00000011950	SFPQ	60	73.088	ENSTSYG00000037120	-	100	73.654	Carlito_syrichta
ENSGMOG00000011950	SFPQ	59	62.751	ENSTSYG00000035106	-	98	62.751	Carlito_syrichta
ENSGMOG00000011950	SFPQ	60	66.761	ENSCPOG00000015018	-	100	64.835	Cavia_porcellus
ENSGMOG00000011950	SFPQ	88	65.490	ENSCCAG00000029361	-	61	74.943	Cebus_capucinus
ENSGMOG00000011950	SFPQ	74	50.913	ENSCATG00000032664	-	60	50.682	Cercocebus_atys
ENSGMOG00000011950	SFPQ	60	73.088	ENSCLAG00000009583	-	100	73.654	Chinchilla_lanigera
ENSGMOG00000011950	SFPQ	74	75.000	ENSCSAG00000001082	SFPQ	61	74.943	Chlorocebus_sabaeus
ENSGMOG00000011950	SFPQ	65	73.560	ENSCHOG00000009131	SFPQ	100	74.084	Choloepus_hoffmanni
ENSGMOG00000011950	SFPQ	75	73.636	ENSCPBG00000018674	SFPQ	68	73.804	Chrysemys_picta_bellii
ENSGMOG00000011950	SFPQ	60	73.088	ENSCANG00000028087	-	100	73.654	Colobus_angolensis_palliatus
ENSGMOG00000011950	SFPQ	74	75.000	ENSCGRG00001011698	Sfpq	62	74.943	Cricetulus_griseus_chok1gshd
ENSGMOG00000011950	SFPQ	74	75.174	ENSCGRG00000010128	Sfpq	95	75.463	Cricetulus_griseus_crigri
ENSGMOG00000011950	SFPQ	88	75.400	ENSCSEG00000007852	sfpq	73	77.778	Cynoglossus_semilaevis
ENSGMOG00000011950	SFPQ	99	78.520	ENSCVAG00000019538	sfpq	97	60.535	Cyprinodon_variegatus
ENSGMOG00000011950	SFPQ	94	64.677	ENSDARG00000011564	sfpq	100	86.957	Danio_rerio
ENSGMOG00000011950	SFPQ	74	75.000	ENSDNOG00000049454	SFPQ	61	74.943	Dasypus_novemcinctus
ENSGMOG00000011950	SFPQ	74	75.000	ENSDORG00000008109	Sfpq	62	74.943	Dipodomys_ordii
ENSGMOG00000011950	SFPQ	74	69.213	ENSETEG00000001095	SFPQ	61	69.213	Echinops_telfairi
ENSGMOG00000011950	SFPQ	74	75.000	ENSEASG00005012012	SFPQ	61	74.943	Equus_asinus_asinus
ENSGMOG00000011950	SFPQ	74	75.000	ENSECAG00000000642	SFPQ	61	74.943	Equus_caballus
ENSGMOG00000011950	SFPQ	80	81.538	ENSELUG00000023145	sfpq	66	85.071	Esox_lucius
ENSGMOG00000011950	SFPQ	74	75.000	ENSFCAG00000042862	SFPQ	62	74.943	Felis_catus
ENSGMOG00000011950	SFPQ	60	71.955	ENSFALG00000000731	SFPQ	100	72.521	Ficedula_albicollis
ENSGMOG00000011950	SFPQ	60	65.254	ENSFDAG00000017723	-	100	66.384	Fukomys_damarensis
ENSGMOG00000011950	SFPQ	98	77.273	ENSFHEG00000015200	sfpq	76	78.230	Fundulus_heteroclitus
ENSGMOG00000011950	SFPQ	75	74.023	ENSGALG00000002514	SFPQ	67	74.483	Gallus_gallus
ENSGMOG00000011950	SFPQ	99	78.282	ENSGAFG00000014571	sfpq	93	66.727	Gambusia_affinis
ENSGMOG00000011950	SFPQ	99	88.333	ENSGACG00000002034	sfpq	89	88.095	Gasterosteus_aculeatus
ENSGMOG00000011950	SFPQ	74	75.000	ENSGGOG00000026354	SFPQ	100	73.654	Gorilla_gorilla
ENSGMOG00000011950	SFPQ	99	84.248	ENSHBUG00000016818	sfpq	83	84.248	Haplochromis_burtoni
ENSGMOG00000011950	SFPQ	74	74.424	ENSHGLG00000012001	SFPQ	63	74.371	Heterocephalus_glaber_female
ENSGMOG00000011950	SFPQ	60	73.088	ENSHGLG00100004136	-	100	73.654	Heterocephalus_glaber_male
ENSGMOG00000011950	SFPQ	99	82.599	ENSHCOG00000008612	sfpq	99	66.498	Hippocampus_comes
ENSGMOG00000011950	SFPQ	75	82.311	ENSIPUG00000013076	SFPQ	100	68.896	Ictalurus_punctatus
ENSGMOG00000011950	SFPQ	60	73.088	ENSSTOG00000014004	-	100	73.654	Ictidomys_tridecemlineatus
ENSGMOG00000011950	SFPQ	74	75.000	ENSJJAG00000015633	Sfpq	61	74.943	Jaculus_jaculus
ENSGMOG00000011950	SFPQ	99	79.572	ENSKMAG00000000238	sfpq	67	79.335	Kryptolebias_marmoratus
ENSGMOG00000011950	SFPQ	93	87.532	ENSLBEG00000003163	sfpq	76	88.119	Labrus_bergylta
ENSGMOG00000011950	SFPQ	80	69.979	ENSLACG00000014728	SFPQ	70	73.563	Latimeria_chalumnae
ENSGMOG00000011950	SFPQ	74	82.093	ENSLOCG00000001067	sfpq	66	85.484	Lepisosteus_oculatus
ENSGMOG00000011950	SFPQ	74	74.769	ENSLAFG00000015951	SFPQ	69	74.713	Loxodonta_africana
ENSGMOG00000011950	SFPQ	74	75.000	ENSMFAG00000000797	SFPQ	61	74.943	Macaca_fascicularis
ENSGMOG00000011950	SFPQ	74	75.000	ENSMMUG00000019154	SFPQ	61	74.943	Macaca_mulatta
ENSGMOG00000011950	SFPQ	74	75.000	ENSMNEG00000038895	SFPQ	61	74.943	Macaca_nemestrina
ENSGMOG00000011950	SFPQ	60	70.255	ENSMLEG00000010643	-	100	70.822	Mandrillus_leucophaeus
ENSGMOG00000011950	SFPQ	56	66.463	ENSMLEG00000035352	-	99	67.073	Mandrillus_leucophaeus
ENSGMOG00000011950	SFPQ	99	72.414	ENSMAMG00000007875	sfpq	90	88.095	Mastacembelus_armatus
ENSGMOG00000011950	SFPQ	99	84.248	ENSMZEG00005026091	sfpq	84	84.248	Maylandia_zebra
ENSGMOG00000011950	SFPQ	65	70.738	ENSMGAG00000004237	SFPQ	100	71.247	Meleagris_gallopavo
ENSGMOG00000011950	SFPQ	74	75.000	ENSMAUG00000006402	Sfpq	62	74.943	Mesocricetus_auratus
ENSGMOG00000011950	SFPQ	74	75.000	ENSMICG00000027265	SFPQ	61	74.943	Microcebus_murinus
ENSGMOG00000011950	SFPQ	74	72.222	ENSMOCG00000019075	Sfpq	89	72.685	Microtus_ochrogaster
ENSGMOG00000011950	SFPQ	99	69.891	ENSMMOG00000001074	sfpq	86	83.688	Mola_mola
ENSGMOG00000011950	SFPQ	74	74.478	ENSMODG00000017937	SFPQ	64	74.424	Monodelphis_domestica
ENSGMOG00000011950	SFPQ	99	70.063	ENSMALG00000010381	sfpq	97	73.016	Monopterus_albus
ENSGMOG00000011950	SFPQ	74	75.000	MGP_CAROLIEiJ_G0026487	Sfpq	62	74.943	Mus_caroli
ENSGMOG00000011950	SFPQ	74	75.000	ENSMUSG00000028820	Sfpq	62	74.943	Mus_musculus
ENSGMOG00000011950	SFPQ	74	75.000	MGP_PahariEiJ_G0028818	Sfpq	62	74.943	Mus_pahari
ENSGMOG00000011950	SFPQ	74	75.000	MGP_SPRETEiJ_G0027466	Sfpq	62	74.943	Mus_spretus
ENSGMOG00000011950	SFPQ	74	75.000	ENSMLUG00000027090	SFPQ	96	75.463	Myotis_lucifugus
ENSGMOG00000011950	SFPQ	74	75.231	ENSNGAG00000000888	Sfpq	61	75.172	Nannospalax_galili
ENSGMOG00000011950	SFPQ	99	84.010	ENSNBRG00000017479	sfpq	84	84.010	Neolamprologus_brichardi
ENSGMOG00000011950	SFPQ	60	73.088	ENSNLEG00000035521	-	100	73.654	Nomascus_leucogenys
ENSGMOG00000011950	SFPQ	74	74.651	ENSMEUG00000014082	SFPQ	61	75.116	Notamacropus_eugenii
ENSGMOG00000011950	SFPQ	74	75.000	ENSOPRG00000013696	SFPQ	61	75.463	Ochotona_princeps
ENSGMOG00000011950	SFPQ	72	65.468	ENSODEG00000005485	SFPQ	76	65.476	Octodon_degus
ENSGMOG00000011950	SFPQ	99	83.771	ENSONIG00000017737	sfpq	80	83.771	Oreochromis_niloticus
ENSGMOG00000011950	SFPQ	60	73.295	ENSOANG00000008789	-	100	73.864	Ornithorhynchus_anatinus
ENSGMOG00000011950	SFPQ	74	75.000	ENSOCUG00000001877	SFPQ	85	75.463	Oryctolagus_cuniculus
ENSGMOG00000011950	SFPQ	99	75.316	ENSORLG00000007459	sfpq	77	81.340	Oryzias_latipes
ENSGMOG00000011950	SFPQ	99	81.579	ENSORLG00020011818	sfpq	77	81.340	Oryzias_latipes_hni
ENSGMOG00000011950	SFPQ	99	75.316	ENSORLG00015002131	sfpq	77	81.340	Oryzias_latipes_hsok
ENSGMOG00000011950	SFPQ	99	81.579	ENSOMEG00000018020	sfpq	76	81.340	Oryzias_melastigma
ENSGMOG00000011950	SFPQ	74	75.000	ENSOGAG00000027710	SFPQ	82	74.943	Otolemur_garnettii
ENSGMOG00000011950	SFPQ	74	74.885	ENSOARG00000019439	SFPQ	66	74.885	Ovis_aries
ENSGMOG00000011950	SFPQ	74	75.000	ENSPPAG00000030078	SFPQ	61	74.943	Pan_paniscus
ENSGMOG00000011950	SFPQ	60	72.881	ENSPPRG00000015478	-	100	73.446	Panthera_pardus
ENSGMOG00000011950	SFPQ	60	73.088	ENSPTIG00000007710	-	100	73.654	Panthera_tigris_altaica
ENSGMOG00000011950	SFPQ	74	69.444	ENSPTRG00000000518	SFPQ	60	69.425	Pan_troglodytes
ENSGMOG00000011950	SFPQ	74	75.000	ENSPANG00000005380	SFPQ	64	74.943	Papio_anubis
ENSGMOG00000011950	SFPQ	79	75.254	ENSPKIG00000023035	sfpq	100	69.295	Paramormyrops_kingsleyae
ENSGMOG00000011950	SFPQ	74	75.289	ENSPSIG00000011494	SFPQ	99	74.537	Pelodiscus_sinensis
ENSGMOG00000011950	SFPQ	96	74.478	ENSPMGG00000023883	sfpq	99	64.636	Periophthalmus_magnuspinnatus
ENSGMOG00000011950	SFPQ	77	72.889	ENSPEMG00000009794	Sfpq	89	75.463	Peromyscus_maniculatus_bairdii
ENSGMOG00000011950	SFPQ	57	71.651	ENSPMAG00000005583	sfpq	95	56.455	Petromyzon_marinus
ENSGMOG00000011950	SFPQ	74	74.478	ENSPCIG00000000923	SFPQ	62	74.424	Phascolarctos_cinereus
ENSGMOG00000011950	SFPQ	99	77.804	ENSPFOG00000003127	sfpq	74	77.566	Poecilia_formosa
ENSGMOG00000011950	SFPQ	99	77.566	ENSPREG00000008060	sfpq	78	77.327	Poecilia_reticulata
ENSGMOG00000011950	SFPQ	84	64.808	ENSPPYG00000001560	SFPQ	72	65.759	Pongo_abelii
ENSGMOG00000011950	SFPQ	73	74.710	ENSPCAG00000006164	SFPQ	60	75.174	Procavia_capensis
ENSGMOG00000011950	SFPQ	74	75.000	ENSPCOG00000027127	SFPQ	61	74.943	Propithecus_coquereli
ENSGMOG00000011950	SFPQ	74	73.611	ENSPVAG00000001865	SFPQ	62	73.333	Pteropus_vampyrus
ENSGMOG00000011950	SFPQ	99	84.248	ENSPNYG00000007494	sfpq	82	84.248	Pundamilia_nyererei
ENSGMOG00000011950	SFPQ	94	67.177	ENSPNAG00000002128	sfpq	100	68.552	Pygocentrus_nattereri
ENSGMOG00000011950	SFPQ	74	75.000	ENSRNOG00000058461	Sfpq	62	74.943	Rattus_norvegicus
ENSGMOG00000011950	SFPQ	75	68.650	ENSRBIG00000035286	SFPQ	100	73.654	Rhinopithecus_bieti
ENSGMOG00000011950	SFPQ	74	75.000	ENSRROG00000040992	SFPQ	100	73.654	Rhinopithecus_roxellana
ENSGMOG00000011950	SFPQ	58	54.519	ENSSBOG00000033925	-	97	54.867	Saimiri_boliviensis_boliviensis
ENSGMOG00000011950	SFPQ	60	73.088	ENSSBOG00000024972	-	100	73.654	Saimiri_boliviensis_boliviensis
ENSGMOG00000011950	SFPQ	74	71.269	ENSSHAG00000016107	-	96	70.824	Sarcophilus_harrisii
ENSGMOG00000011950	SFPQ	60	71.225	ENSSHAG00000012312	-	100	70.655	Sarcophilus_harrisii
ENSGMOG00000011950	SFPQ	100	69.550	ENSSFOG00015009289	sfpq	100	68.151	Scleropages_formosus
ENSGMOG00000011950	SFPQ	99	67.863	ENSSMAG00000018201	sfpq	94	79.789	Scophthalmus_maximus
ENSGMOG00000011950	SFPQ	99	69.444	ENSSDUG00000008402	sfpq	84	88.278	Seriola_dumerili
ENSGMOG00000011950	SFPQ	99	69.538	ENSSLDG00000018917	sfpq	84	88.278	Seriola_lalandi_dorsalis
ENSGMOG00000011950	SFPQ	63	74.324	ENSSARG00000006409	SFPQ	100	74.865	Sorex_araneus
ENSGMOG00000011950	SFPQ	98	86.842	ENSSPAG00000016550	sfpq	85	86.603	Stegastes_partitus
ENSGMOG00000011950	SFPQ	74	75.000	ENSSSCG00000035690	SFPQ	62	74.943	Sus_scrofa
ENSGMOG00000011950	SFPQ	74	74.306	ENSTGUG00000001722	SFPQ	99	74.306	Taeniopygia_guttata
ENSGMOG00000011950	SFPQ	99	86.905	ENSTRUG00000003783	sfpq	81	86.667	Takifugu_rubripes
ENSGMOG00000011950	SFPQ	74	88.333	ENSTNIG00000011331	sfpq	71	88.095	Tetraodon_nigroviridis
ENSGMOG00000011950	SFPQ	69	80.385	ENSTBEG00000006238	SFPQ	58	79.468	Tupaia_belangeri
ENSGMOG00000011950	SFPQ	52	83.085	ENSUAMG00000026758	SFPQ	74	83.085	Ursus_americanus
ENSGMOG00000011950	SFPQ	60	70.822	ENSUMAG00000008056	-	100	71.388	Ursus_maritimus
ENSGMOG00000011950	SFPQ	51	83.681	ENSVPAG00000006960	-	55	71.662	Vicugna_pacos
ENSGMOG00000011950	SFPQ	60	67.143	ENSVVUG00000000874	-	100	67.139	Vulpes_vulpes
ENSGMOG00000011950	SFPQ	74	70.481	ENSXETG00000009682	sfpq	94	81.159	Xenopus_tropicalis
ENSGMOG00000011950	SFPQ	93	78.796	ENSXMAG00000016391	sfpq	74	80.000	Xiphophorus_maculatus