EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000011992 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 12964 bases
Position: chrGeneScaffold_1439:67712-80675
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012834	KH_1	PF00013.29	7.7e-55	1	3
ENSGMOP00000012834	KH_1	PF00013.29	7.7e-55	2	3
ENSGMOP00000012834	KH_1	PF00013.29	7.7e-55	3	3
ENSGMOP00000012834	KH_2	PF07650.17	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013174	-	957	-	ENSGMOP00000012834	319 (aa)	-	UPI00023F270B

Gene Model

Click here to download ENSGMOG00000011992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000011992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000011992	pcbp3	87	32.117	ENSGMOG00000019381	igf2bp1	61	32.117
ENSGMOG00000011992	pcbp3	94	67.485	ENSGMOG00000009787	pcbp2	95	67.178
ENSGMOG00000011992	pcbp3	87	36.170	ENSGMOG00000019327	igf2bp2b	61	36.170
ENSGMOG00000011992	pcbp3	95	54.131	ENSGMOG00000017799	-	73	54.131
ENSGMOG00000011992	pcbp3	73	42.857	ENSGMOG00000011253	nova1	64	34.194
ENSGMOG00000011992	pcbp3	94	65.672	ENSGMOG00000001342	PCBP2	90	65.075
ENSGMOG00000011992	pcbp3	69	36.923	ENSGMOG00000017047	-	62	36.923
ENSGMOG00000011992	pcbp3	96	66.272	ENSGMOG00000008611	-	99	65.976
ENSGMOG00000011992	pcbp3	94	63.473	ENSGMOG00000005953	zgc:110045	95	62.874

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000011992	pcbp3	96	81.682	ENSAPOG00000016582	-	94	81.682	Acanthochromis_polyacanthus
ENSGMOG00000011992	pcbp3	96	79.641	ENSAPOG00000020003	pcbp3	86	79.580	Acanthochromis_polyacanthus
ENSGMOG00000011992	pcbp3	95	80.303	ENSAMEG00000001697	-	88	81.155	Ailuropoda_melanoleuca
ENSGMOG00000011992	pcbp3	96	75.235	ENSACIG00000010933	pcbp3	99	75.556	Amphilophus_citrinellus
ENSGMOG00000011992	pcbp3	97	76.901	ENSACIG00000002739	-	97	76.901	Amphilophus_citrinellus
ENSGMOG00000011992	pcbp3	92	80.000	ENSAOCG00000007806	-	97	79.322	Amphiprion_ocellaris
ENSGMOG00000011992	pcbp3	96	82.036	ENSAOCG00000008592	-	97	81.982	Amphiprion_ocellaris
ENSGMOG00000011992	pcbp3	97	79.104	ENSAPEG00000005209	-	97	79.104	Amphiprion_percula
ENSGMOG00000011992	pcbp3	96	76.471	ENSAPEG00000008011	pcbp3	95	76.404	Amphiprion_percula
ENSGMOG00000011992	pcbp3	97	78.806	ENSATEG00000009833	-	97	78.806	Anabas_testudineus
ENSGMOG00000011992	pcbp3	96	74.510	ENSATEG00000015787	-	99	74.438	Anabas_testudineus
ENSGMOG00000011992	pcbp3	95	80.183	ENSAPLG00000002975	-	95	78.274	Anas_platyrhynchos
ENSGMOG00000011992	pcbp3	95	66.489	ENSAPLG00000008951	-	79	65.957	Anas_platyrhynchos
ENSGMOG00000011992	pcbp3	95	70.286	ENSACAG00000009819	-	95	70.370	Anolis_carolinensis
ENSGMOG00000011992	pcbp3	95	73.803	ENSACAG00000004607	-	96	73.803	Anolis_carolinensis
ENSGMOG00000011992	pcbp3	92	83.186	ENSANAG00000030702	-	96	83.186	Aotus_nancymaae
ENSGMOG00000011992	pcbp3	96	76.190	ENSACLG00000011835	pcbp3	95	76.124	Astatotilapia_calliptera
ENSGMOG00000011992	pcbp3	97	80.896	ENSACLG00000003801	-	97	80.896	Astatotilapia_calliptera
ENSGMOG00000011992	pcbp3	97	56.944	ENSAMXG00000001760	zgc:110045	74	56.389	Astyanax_mexicanus
ENSGMOG00000011992	pcbp3	96	76.404	ENSAMXG00000003440	pcbp3	95	76.404	Astyanax_mexicanus
ENSGMOG00000011992	pcbp3	96	78.012	ENSAMXG00000013588	-	99	77.410	Astyanax_mexicanus
ENSGMOG00000011992	pcbp3	82	86.207	ENSCAFG00020019472	-	83	86.207	Canis_lupus_dingo
ENSGMOG00000011992	pcbp3	95	79.878	ENSCSAG00000007440	-	87	79.878	Chlorocebus_sabaeus
ENSGMOG00000011992	pcbp3	95	71.143	ENSCPBG00000000733	-	73	69.944	Chrysemys_picta_bellii
ENSGMOG00000011992	pcbp3	95	80.793	ENSCPBG00000012151	-	96	80.793	Chrysemys_picta_bellii
ENSGMOG00000011992	pcbp3	96	78.743	ENSCSEG00000000822	pcbp3	99	78.679	Cynoglossus_semilaevis
ENSGMOG00000011992	pcbp3	97	69.527	ENSCSEG00000016984	-	97	69.527	Cynoglossus_semilaevis
ENSGMOG00000011992	pcbp3	96	76.685	ENSCVAG00000014482	pcbp3	95	76.620	Cyprinodon_variegatus
ENSGMOG00000011992	pcbp3	97	80.597	ENSCVAG00000005262	-	97	80.597	Cyprinodon_variegatus
ENSGMOG00000011992	pcbp3	97	76.257	ENSDARG00000054378	pcbp3	97	76.257	Danio_rerio
ENSGMOG00000011992	pcbp3	95	66.463	ENSETEG00000015988	-	95	66.463	Echinops_telfairi
ENSGMOG00000011992	pcbp3	62	66.222	ENSEBUG00000005495	pcbp3	68	66.222	Eptatretus_burgeri
ENSGMOG00000011992	pcbp3	92	60.345	ENSEBUG00000016192	pcbp3	99	60.345	Eptatretus_burgeri
ENSGMOG00000011992	pcbp3	96	68.955	ENSEBUG00000007485	-	92	72.146	Eptatretus_burgeri
ENSGMOG00000011992	pcbp3	99	75.072	ENSELUG00000003521	pcbp3	99	75.072	Esox_lucius
ENSGMOG00000011992	pcbp3	96	81.381	ENSELUG00000001560	-	99	72.900	Esox_lucius
ENSGMOG00000011992	pcbp3	95	66.489	ENSFALG00000004411	-	74	66.313	Ficedula_albicollis
ENSGMOG00000011992	pcbp3	95	80.122	ENSFALG00000003949	-	95	80.122	Ficedula_albicollis
ENSGMOG00000011992	pcbp3	97	79.403	ENSFHEG00000016615	pcbp3	95	79.341	Fundulus_heteroclitus
ENSGMOG00000011992	pcbp3	97	78.507	ENSFHEG00000006539	-	97	78.507	Fundulus_heteroclitus
ENSGMOG00000011992	pcbp3	95	73.429	ENSGALG00000004394	-	98	76.630	Gallus_gallus
ENSGMOG00000011992	pcbp3	95	71.875	ENSGALG00000013155	-	98	69.054	Gallus_gallus
ENSGMOG00000011992	pcbp3	96	72.829	ENSGAFG00000011430	pcbp3	95	72.753	Gambusia_affinis
ENSGMOG00000011992	pcbp3	96	81.381	ENSGAFG00000010274	-	94	81.381	Gambusia_affinis
ENSGMOG00000011992	pcbp3	100	79.946	ENSGACG00000014955	-	100	79.946	Gasterosteus_aculeatus
ENSGMOG00000011992	pcbp3	97	82.934	ENSGACG00000002266	-	96	82.934	Gasterosteus_aculeatus
ENSGMOG00000011992	pcbp3	91	73.793	ENSGAGG00000000271	-	100	73.540	Gopherus_agassizii
ENSGMOG00000011992	pcbp3	68	85.542	ENSGAGG00000006956	-	66	85.542	Gopherus_agassizii
ENSGMOG00000011992	pcbp3	97	80.896	ENSHBUG00000021782	-	97	80.896	Haplochromis_burtoni
ENSGMOG00000011992	pcbp3	96	79.580	ENSHBUG00000010697	pcbp3	98	79.518	Haplochromis_burtoni
ENSGMOG00000011992	pcbp3	97	77.914	ENSHCOG00000006067	-	97	78.593	Hippocampus_comes
ENSGMOG00000011992	pcbp3	96	76.685	ENSHCOG00000017868	pcbp3	95	76.620	Hippocampus_comes
ENSGMOG00000011992	pcbp3	97	78.209	ENSIPUG00000006238	pcbp3	97	78.209	Ictalurus_punctatus
ENSGMOG00000011992	pcbp3	96	76.190	ENSKMAG00000003046	pcbp3	95	76.124	Kryptolebias_marmoratus
ENSGMOG00000011992	pcbp3	96	80.480	ENSKMAG00000018530	-	94	80.480	Kryptolebias_marmoratus
ENSGMOG00000011992	pcbp3	96	79.580	ENSLBEG00000006201	pcbp3	95	79.518	Labrus_bergylta
ENSGMOG00000011992	pcbp3	97	66.176	ENSLBEG00000006542	-	97	66.176	Labrus_bergylta
ENSGMOG00000011992	pcbp3	95	70.321	ENSLACG00000010386	pcbp3	74	70.321	Latimeria_chalumnae
ENSGMOG00000011992	pcbp3	95	66.488	ENSLACG00000010804	zgc:110045	74	66.310	Latimeria_chalumnae
ENSGMOG00000011992	pcbp3	95	79.042	ENSLOCG00000009369	pcbp3	96	79.042	Lepisosteus_oculatus
ENSGMOG00000011992	pcbp3	95	70.857	ENSLOCG00000005058	zgc:110045	80	70.655	Lepisosteus_oculatus
ENSGMOG00000011992	pcbp3	97	77.612	ENSMAMG00000011620	-	97	77.612	Mastacembelus_armatus
ENSGMOG00000011992	pcbp3	96	79.880	ENSMAMG00000022336	pcbp3	93	79.819	Mastacembelus_armatus
ENSGMOG00000011992	pcbp3	97	73.988	ENSMZEG00005014882	-	97	74.277	Maylandia_zebra
ENSGMOG00000011992	pcbp3	96	76.061	ENSMZEG00005008993	pcbp3	98	74.157	Maylandia_zebra
ENSGMOG00000011992	pcbp3	94	74.011	ENSMGAG00000001883	-	95	72.881	Meleagris_gallopavo
ENSGMOG00000011992	pcbp3	95	66.755	ENSMGAG00000006794	-	74	66.223	Meleagris_gallopavo
ENSGMOG00000011992	pcbp3	100	77.233	ENSMMOG00000000730	pcbp3	91	77.168	Mola_mola
ENSGMOG00000011992	pcbp3	97	78.209	ENSMMOG00000005216	-	97	78.209	Mola_mola
ENSGMOG00000011992	pcbp3	71	60.714	ENSMODG00000027884	-	94	62.100	Monodelphis_domestica
ENSGMOG00000011992	pcbp3	95	76.299	ENSMALG00000000691	pcbp3	96	74.359	Monopterus_albus
ENSGMOG00000011992	pcbp3	95	73.054	ENSMPUG00000001779	-	88	74.312	Mustela_putorius_furo
ENSGMOG00000011992	pcbp3	96	72.965	ENSNBRG00000016714	-	96	72.941	Neolamprologus_brichardi
ENSGMOG00000011992	pcbp3	96	74.438	ENSNBRG00000016409	-	95	74.366	Neolamprologus_brichardi
ENSGMOG00000011992	pcbp3	94	73.066	ENSOPRG00000003431	-	99	73.066	Ochotona_princeps
ENSGMOG00000011992	pcbp3	97	80.896	ENSONIG00000004611	-	97	80.896	Oreochromis_niloticus
ENSGMOG00000011992	pcbp3	96	76.966	ENSONIG00000012122	-	97	76.966	Oreochromis_niloticus
ENSGMOG00000011992	pcbp3	95	79.817	ENSOCUG00000002696	-	87	79.817	Oryctolagus_cuniculus
ENSGMOG00000011992	pcbp3	96	82.036	ENSORLG00000000059	pcbp3	99	81.982	Oryzias_latipes
ENSGMOG00000011992	pcbp3	97	80.896	ENSORLG00000022739	-	97	80.896	Oryzias_latipes
ENSGMOG00000011992	pcbp3	96	82.036	ENSORLG00020012671	pcbp3	97	81.982	Oryzias_latipes_hni
ENSGMOG00000011992	pcbp3	97	80.597	ENSORLG00020006124	-	97	80.597	Oryzias_latipes_hni
ENSGMOG00000011992	pcbp3	96	81.381	ENSORLG00015008051	-	94	81.381	Oryzias_latipes_hsok
ENSGMOG00000011992	pcbp3	96	82.036	ENSORLG00015000429	pcbp3	97	81.982	Oryzias_latipes_hsok
ENSGMOG00000011992	pcbp3	92	79.801	ENSOMEG00000020811	pcbp3	96	79.734	Oryzias_melastigma
ENSGMOG00000011992	pcbp3	97	80.896	ENSOMEG00000020162	-	97	80.896	Oryzias_melastigma
ENSGMOG00000011992	pcbp3	95	73.803	ENSOGAG00000008044	-	96	73.803	Otolemur_garnettii
ENSGMOG00000011992	pcbp3	96	81.325	ENSPKIG00000019329	pcbp3	97	78.507	Paramormyrops_kingsleyae
ENSGMOG00000011992	pcbp3	76	85.890	ENSPKIG00000020913	-	70	85.890	Paramormyrops_kingsleyae
ENSGMOG00000011992	pcbp3	69	64.444	ENSPSIG00000008350	-	68	64.444	Pelodiscus_sinensis
ENSGMOG00000011992	pcbp3	95	71.687	ENSPSIG00000014970	-	95	71.646	Pelodiscus_sinensis
ENSGMOG00000011992	pcbp3	96	76.471	ENSPMGG00000022383	pcbp3	95	76.404	Periophthalmus_magnuspinnatus
ENSGMOG00000011992	pcbp3	95	62.538	ENSPMAG00000004551	pcbp3	89	61.934	Petromyzon_marinus
ENSGMOG00000011992	pcbp3	68	90.244	ENSPMAG00000004637	-	85	90.244	Petromyzon_marinus
ENSGMOG00000011992	pcbp3	95	74.644	ENSPCIG00000028092	-	90	85.222	Phascolarctos_cinereus
ENSGMOG00000011992	pcbp3	96	80.000	ENSPLAG00000004074	-	89	80.000	Poecilia_latipinna
ENSGMOG00000011992	pcbp3	96	75.000	ENSPLAG00000011449	pcbp3	88	75.000	Poecilia_latipinna
ENSGMOG00000011992	pcbp3	96	75.833	ENSPMEG00000021239	pcbp3	95	75.766	Poecilia_mexicana
ENSGMOG00000011992	pcbp3	96	77.485	ENSPMEG00000006653	-	96	77.485	Poecilia_mexicana
ENSGMOG00000011992	pcbp3	97	78.209	ENSPREG00000020585	-	95	85.308	Poecilia_reticulata
ENSGMOG00000011992	pcbp3	96	77.679	ENSPREG00000015736	pcbp3	99	77.612	Poecilia_reticulata
ENSGMOG00000011992	pcbp3	97	78.507	ENSPNYG00000013205	-	97	78.507	Pundamilia_nyererei
ENSGMOG00000011992	pcbp3	96	79.341	ENSPNYG00000012326	pcbp3	95	79.279	Pundamilia_nyererei
ENSGMOG00000011992	pcbp3	97	76.647	ENSPNAG00000008541	-	99	76.647	Pygocentrus_nattereri
ENSGMOG00000011992	pcbp3	97	81.194	ENSPNAG00000015104	pcbp3	97	81.194	Pygocentrus_nattereri
ENSGMOG00000011992	pcbp3	95	79.878	ENSRNOG00000001245	Pcbp3	95	79.878	Rattus_norvegicus
ENSGMOG00000011992	pcbp3	95	75.796	ENSRBIG00000028177	-	87	75.796	Rhinopithecus_bieti
ENSGMOG00000011992	pcbp3	95	80.734	ENSSHAG00000007890	-	96	80.734	Sarcophilus_harrisii
ENSGMOG00000011992	pcbp3	94	72.000	ENSSFOG00015007118	-	92	72.000	Scleropages_formosus
ENSGMOG00000011992	pcbp3	96	75.211	ENSSFOG00015014706	pcbp3	95	75.211	Scleropages_formosus
ENSGMOG00000011992	pcbp3	96	81.928	ENSSFOG00015010205	pcbp3	94	81.928	Scleropages_formosus
ENSGMOG00000011992	pcbp3	97	80.597	ENSSMAG00000003135	-	97	80.597	Scophthalmus_maximus
ENSGMOG00000011992	pcbp3	96	79.641	ENSSMAG00000011929	pcbp3	97	79.580	Scophthalmus_maximus
ENSGMOG00000011992	pcbp3	96	75.893	ENSSDUG00000008502	-	98	74.540	Seriola_dumerili
ENSGMOG00000011992	pcbp3	96	74.438	ENSSDUG00000011608	pcbp3	98	74.366	Seriola_dumerili
ENSGMOG00000011992	pcbp3	96	74.438	ENSSLDG00000008518	pcbp3	98	74.366	Seriola_lalandi_dorsalis
ENSGMOG00000011992	pcbp3	96	81.682	ENSSLDG00000020161	-	94	81.682	Seriola_lalandi_dorsalis
ENSGMOG00000011992	pcbp3	76	88.415	ENSSPUG00000013214	-	74	88.415	Sphenodon_punctatus
ENSGMOG00000011992	pcbp3	92	80.272	ENSSPAG00000004190	-	97	79.592	Stegastes_partitus
ENSGMOG00000011992	pcbp3	96	71.257	ENSSPAG00000023341	-	94	69.486	Stegastes_partitus
ENSGMOG00000011992	pcbp3	95	77.134	ENSTGUG00000003316	-	96	77.134	Taeniopygia_guttata
ENSGMOG00000011992	pcbp3	95	75.915	ENSTGUG00000008158	-	96	75.684	Taeniopygia_guttata
ENSGMOG00000011992	pcbp3	92	79.139	ENSTRUG00000006280	-	89	79.139	Takifugu_rubripes
ENSGMOG00000011992	pcbp3	96	77.551	ENSTRUG00000013604	pcbp3	75	98.246	Takifugu_rubripes
ENSGMOG00000011992	pcbp3	95	74.571	ENSTTRG00000015075	-	96	74.571	Tursiops_truncatus
ENSGMOG00000011992	pcbp3	92	64.754	ENSXETG00000010491	pcbp2	76	64.481	Xenopus_tropicalis
ENSGMOG00000011992	pcbp3	95	77.059	ENSXETG00000011483	pcbp1	96	79.394	Xenopus_tropicalis
ENSGMOG00000011992	pcbp3	96	75.833	ENSXCOG00000020481	pcbp3	95	75.766	Xiphophorus_couchianus
ENSGMOG00000011992	pcbp3	96	76.471	ENSXMAG00000008175	pcbp3	95	76.404	Xiphophorus_maculatus
ENSGMOG00000011992	pcbp3	96	81.381	ENSXMAG00000028711	-	94	81.381	Xiphophorus_maculatus