EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000012137 (Gene tree)
Gene ID: -
Gene Symbol: cirbpa
Alias: cirbp|wu:fb12c11|wu:fi20g12|zgc:136559
Full Name: cold inducible RNA binding protein a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1421 bases
Position: chrGeneScaffold_3660:747670-749090
Accession: ZDB-GENE-050417-329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012998	RRM_1	PF00076.22	3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013342	-	558	-	ENSGMOP00000012998	185 (aa)	-	UPI00023F2930

Gene Model

Click here to download ENSGMOG00000012137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000012137	cirbpa	61	35.106	ENSGMOG00000009633	rbm14b	59	34.211
ENSGMOG00000012137	cirbpa	54	41.558	ENSGMOG00000020353	-	86	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012137	cirbpa	82	41.722	ENSELUG00000004675	-	55	71.605	Esox_lucius
ENSGMOG00000012137	cirbpa	99	62.500	ENSFHEG00000002580	cirbpa	100	62.500	Fundulus_heteroclitus
ENSGMOG00000012137	cirbpa	100	60.938	ENSGACG00000015206	cirbpa	100	58.333	Gasterosteus_aculeatus
ENSGMOG00000012137	cirbpa	66	61.789	ENSHCOG00000001170	cirbpa	68	77.778	Hippocampus_comes
ENSGMOG00000012137	cirbpa	100	56.545	ENSLBEG00000000292	cirbpa	50	71.605	Labrus_bergylta
ENSGMOG00000012137	cirbpa	99	59.016	ENSSPAG00000023037	cirbpa	50	83.951	Stegastes_partitus
ENSGMOG00000012137	cirbpa	100	60.000	ENSTRUG00000010187	cirbpa	60	77.778	Takifugu_rubripes
ENSGMOG00000012137	cirbpa	99	61.538	ENSXCOG00000008262	cirbpa	92	78.082	Xiphophorus_couchianus