EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000012139 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 579 bases
Position: chrGeneScaffold_2877:66679-67257
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000012999	RF-1	PF00472.20	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013343	-	444	-	ENSGMOP00000012999	148 (aa)	-	UPI00023F2932

Gene Model

Click here to download ENSGMOG00000012139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSG00000130921	C12orf65	71	66.327	Homo_sapiens
ENSGMOG00000012139	si:ch211-275j6.5	89	74.809	ENSAPOG00000000995	si:ch211-275j6.5	79	74.809	Acanthochromis_polyacanthus
ENSGMOG00000012139	si:ch211-275j6.5	56	69.880	ENSAMEG00000015144	C12orf65	71	63.717	Ailuropoda_melanoleuca
ENSGMOG00000012139	si:ch211-275j6.5	85	76.984	ENSACIG00000001644	si:ch211-275j6.5	79	76.984	Amphilophus_citrinellus
ENSGMOG00000012139	si:ch211-275j6.5	85	77.778	ENSAOCG00000005589	si:ch211-275j6.5	80	77.778	Amphiprion_ocellaris
ENSGMOG00000012139	si:ch211-275j6.5	85	77.778	ENSAPEG00000024618	si:ch211-275j6.5	77	77.778	Amphiprion_percula
ENSGMOG00000012139	si:ch211-275j6.5	99	69.595	ENSATEG00000011661	si:ch211-275j6.5	79	69.595	Anabas_testudineus
ENSGMOG00000012139	si:ch211-275j6.5	79	66.667	ENSAPLG00000016073	C12orf65	98	66.667	Anas_platyrhynchos
ENSGMOG00000012139	si:ch211-275j6.5	81	66.935	ENSACAG00000015561	C12orf65	63	66.935	Anolis_carolinensis
ENSGMOG00000012139	si:ch211-275j6.5	59	68.966	ENSANAG00000022881	C12orf65	71	64.103	Aotus_nancymaae
ENSGMOG00000012139	si:ch211-275j6.5	89	77.099	ENSACLG00000023906	si:ch211-275j6.5	81	77.099	Astatotilapia_calliptera
ENSGMOG00000012139	si:ch211-275j6.5	91	63.504	ENSAMXG00000031765	si:ch211-275j6.5	92	62.667	Astyanax_mexicanus
ENSGMOG00000012139	si:ch211-275j6.5	79	63.248	ENSBTAG00000020503	C17H12orf65	68	63.248	Bos_taurus
ENSGMOG00000012139	si:ch211-275j6.5	59	71.264	ENSCJAG00000016579	C12orf65	71	65.812	Callithrix_jacchus
ENSGMOG00000012139	si:ch211-275j6.5	64	68.367	ENSCAFG00000007512	C26H12orf65	54	61.538	Canis_familiaris
ENSGMOG00000012139	si:ch211-275j6.5	64	68.367	ENSCAFG00020016169	C12orf65	78	61.538	Canis_lupus_dingo
ENSGMOG00000012139	si:ch211-275j6.5	79	64.957	ENSCHIG00000022229	C12orf65	66	64.957	Capra_hircus
ENSGMOG00000012139	si:ch211-275j6.5	66	66.327	ENSCAPG00000014691	C12orf65	67	62.097	Cavia_aperea
ENSGMOG00000012139	si:ch211-275j6.5	66	66.337	ENSCPOG00000007583	C12orf65	69	62.205	Cavia_porcellus
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSCATG00000040685	C12orf65	71	64.103	Cercocebus_atys
ENSGMOG00000012139	si:ch211-275j6.5	74	50.388	ENSCLAG00000014329	C12orf65	83	49.677	Chinchilla_lanigera
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSCSAG00000002068	C12orf65	69	64.103	Chlorocebus_sabaeus
ENSGMOG00000012139	si:ch211-275j6.5	88	63.846	ENSCPBG00000025970	C12orf65	79	63.359	Chrysemys_picta_bellii
ENSGMOG00000012139	si:ch211-275j6.5	64	64.894	ENSCGRG00001013424	2810006K23Rik	67	60.163	Cricetulus_griseus_chok1gshd
ENSGMOG00000012139	si:ch211-275j6.5	64	64.894	ENSCGRG00000003037	2810006K23Rik	67	60.163	Cricetulus_griseus_crigri
ENSGMOG00000012139	si:ch211-275j6.5	89	67.910	ENSCSEG00000014536	si:ch211-275j6.5	80	67.910	Cynoglossus_semilaevis
ENSGMOG00000012139	si:ch211-275j6.5	84	76.000	ENSCVAG00000023000	si:ch211-275j6.5	74	75.397	Cyprinodon_variegatus
ENSGMOG00000012139	si:ch211-275j6.5	82	72.131	ENSDARG00000097803	si:ch211-275j6.5	89	72.131	Danio_rerio
ENSGMOG00000012139	si:ch211-275j6.5	63	62.366	ENSDNOG00000034728	C12orf65	70	58.120	Dasypus_novemcinctus
ENSGMOG00000012139	si:ch211-275j6.5	69	63.810	ENSDORG00000026069	2810006K23Rik	74	60.156	Dipodomys_ordii
ENSGMOG00000012139	si:ch211-275j6.5	76	46.018	FBgn0050100	CG30100	77	46.018	Drosophila_melanogaster
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSEASG00005012587	C12orf65	70	64.957	Equus_asinus_asinus
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSECAG00000001057	C8H12orf65	70	64.957	Equus_caballus
ENSGMOG00000012139	si:ch211-275j6.5	59	71.264	ENSEEUG00000007231	C12orf65	70	62.393	Erinaceus_europaeus
ENSGMOG00000012139	si:ch211-275j6.5	84	74.400	ENSELUG00000015178	lg13h12orf65	75	74.400	Esox_lucius
ENSGMOG00000012139	si:ch211-275j6.5	59	70.455	ENSFCAG00000015328	C12orf65	71	64.407	Felis_catus
ENSGMOG00000012139	si:ch211-275j6.5	80	58.779	ENSFALG00000009261	C12orf65	84	59.859	Ficedula_albicollis
ENSGMOG00000012139	si:ch211-275j6.5	89	75.573	ENSFHEG00000017567	si:ch211-275j6.5	78	75.573	Fundulus_heteroclitus
ENSGMOG00000012139	si:ch211-275j6.5	86	63.780	ENSGALG00000029390	C15H12ORF65	77	63.780	Gallus_gallus
ENSGMOG00000012139	si:ch211-275j6.5	89	70.992	ENSGACG00000008255	si:ch211-275j6.5	82	70.992	Gasterosteus_aculeatus
ENSGMOG00000012139	si:ch211-275j6.5	58	76.744	ENSGAGG00000000823	C12orf65	69	72.277	Gopherus_agassizii
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSGGOG00000012850	C12orf65	70	64.103	Gorilla_gorilla
ENSGMOG00000012139	si:ch211-275j6.5	89	77.099	ENSHBUG00000007273	si:ch211-275j6.5	81	77.099	Haplochromis_burtoni
ENSGMOG00000012139	si:ch211-275j6.5	65	66.667	ENSHGLG00000010966	C12orf65	69	62.016	Heterocephalus_glaber_female
ENSGMOG00000012139	si:ch211-275j6.5	65	66.667	ENSHGLG00100018631	C12orf65	69	62.016	Heterocephalus_glaber_male
ENSGMOG00000012139	si:ch211-275j6.5	90	63.910	ENSHCOG00000019848	si:ch211-275j6.5	78	63.910	Hippocampus_comes
ENSGMOG00000012139	si:ch211-275j6.5	86	73.485	ENSIPUG00000020793	si:ch211-275j6.5	81	73.485	Ictalurus_punctatus
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSSTOG00000016463	C12orf65	67	63.248	Ictidomys_tridecemlineatus
ENSGMOG00000012139	si:ch211-275j6.5	79	61.538	ENSJJAG00000023360	2810006K23Rik	63	61.538	Jaculus_jaculus
ENSGMOG00000012139	si:ch211-275j6.5	99	68.212	ENSKMAG00000018733	si:ch211-275j6.5	93	68.212	Kryptolebias_marmoratus
ENSGMOG00000012139	si:ch211-275j6.5	95	59.286	ENSLACG00000017355	C12orf65	83	59.286	Latimeria_chalumnae
ENSGMOG00000012139	si:ch211-275j6.5	82	66.116	ENSLOCG00000005702	si:ch211-275j6.5	100	66.116	Lepisosteus_oculatus
ENSGMOG00000012139	si:ch211-275j6.5	79	64.957	ENSLAFG00000002134	C12orf65	70	64.957	Loxodonta_africana
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSMMUG00000031495	C12orf65	71	64.103	Macaca_mulatta
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSMNEG00000044673	C12orf65	71	64.103	Macaca_nemestrina
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSMLEG00000044309	C12orf65	71	64.103	Mandrillus_leucophaeus
ENSGMOG00000012139	si:ch211-275j6.5	100	69.333	ENSMAMG00000017366	si:ch211-275j6.5	89	69.333	Mastacembelus_armatus
ENSGMOG00000012139	si:ch211-275j6.5	89	77.099	ENSMZEG00005000938	si:ch211-275j6.5	80	77.099	Maylandia_zebra
ENSGMOG00000012139	si:ch211-275j6.5	78	64.655	ENSMGAG00000003354	C12orf65	85	64.655	Meleagris_gallopavo
ENSGMOG00000012139	si:ch211-275j6.5	55	69.512	ENSMAUG00000010304	2810006K23Rik	66	69.512	Mesocricetus_auratus
ENSGMOG00000012139	si:ch211-275j6.5	59	68.182	ENSMICG00000037138	C12orf65	70	63.248	Microcebus_murinus
ENSGMOG00000012139	si:ch211-275j6.5	65	67.708	ENSMOCG00000017477	2810006K23Rik	65	63.025	Microtus_ochrogaster
ENSGMOG00000012139	si:ch211-275j6.5	100	70.946	ENSMMOG00000017134	si:ch211-275j6.5	88	70.946	Mola_mola
ENSGMOG00000012139	si:ch211-275j6.5	79	64.957	ENSMODG00000012450	C12orf65	67	65.517	Monodelphis_domestica
ENSGMOG00000012139	si:ch211-275j6.5	85	77.778	ENSMALG00000012291	si:ch211-275j6.5	89	70.000	Monopterus_albus
ENSGMOG00000012139	si:ch211-275j6.5	62	66.304	MGP_CAROLIEiJ_G0027747	2810006K23Rik	64	62.393	Mus_caroli
ENSGMOG00000012139	si:ch211-275j6.5	62	66.304	ENSMUSG00000047635	2810006K23Rik	64	62.393	Mus_musculus
ENSGMOG00000012139	si:ch211-275j6.5	62	67.391	MGP_SPRETEiJ_G0028745	2810006K23Rik	64	63.248	Mus_spretus
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSMPUG00000001679	C12orf65	69	62.810	Mustela_putorius_furo
ENSGMOG00000012139	si:ch211-275j6.5	88	57.692	ENSMLUG00000007001	C12orf65	83	55.797	Myotis_lucifugus
ENSGMOG00000012139	si:ch211-275j6.5	85	59.690	ENSNGAG00000010625	2810006K23Rik	72	59.690	Nannospalax_galili
ENSGMOG00000012139	si:ch211-275j6.5	89	76.336	ENSNBRG00000008082	si:ch211-275j6.5	81	76.336	Neolamprologus_brichardi
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSNLEG00000001470	C12orf65	70	64.103	Nomascus_leucogenys
ENSGMOG00000012139	si:ch211-275j6.5	97	61.379	ENSMEUG00000009430	C12orf65	90	61.379	Notamacropus_eugenii
ENSGMOG00000012139	si:ch211-275j6.5	82	60.331	ENSOPRG00000011029	C12orf65	76	60.331	Ochotona_princeps
ENSGMOG00000012139	si:ch211-275j6.5	85	59.690	ENSODEG00000011382	-	74	59.690	Octodon_degus
ENSGMOG00000012139	si:ch211-275j6.5	85	79.365	ENSONIG00000013298	si:ch211-275j6.5	75	79.365	Oreochromis_niloticus
ENSGMOG00000012139	si:ch211-275j6.5	77	69.298	ENSOANG00000012866	C12orf65	66	69.298	Ornithorhynchus_anatinus
ENSGMOG00000012139	si:ch211-275j6.5	70	59.223	ENSOCUG00000011888	C12orf65	69	59.223	Oryctolagus_cuniculus
ENSGMOG00000012139	si:ch211-275j6.5	89	73.282	ENSORLG00000006153	si:ch211-275j6.5	78	73.282	Oryzias_latipes
ENSGMOG00000012139	si:ch211-275j6.5	89	74.046	ENSORLG00020017188	si:ch211-275j6.5	78	74.046	Oryzias_latipes_hni
ENSGMOG00000012139	si:ch211-275j6.5	89	73.282	ENSORLG00015005780	c9h12orf65	78	73.282	Oryzias_latipes_hsok
ENSGMOG00000012139	si:ch211-275j6.5	84	75.200	ENSOMEG00000001663	si:ch211-275j6.5	74	75.200	Oryzias_melastigma
ENSGMOG00000012139	si:ch211-275j6.5	59	68.182	ENSOGAG00000010778	C12orf65	83	58.824	Otolemur_garnettii
ENSGMOG00000012139	si:ch211-275j6.5	79	63.248	ENSOARG00000005214	C12orf65	69	63.248	Ovis_aries
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSPPAG00000029654	C12orf65	70	64.103	Pan_paniscus
ENSGMOG00000012139	si:ch211-275j6.5	79	64.407	ENSPPRG00000024772	C12orf65	71	64.407	Panthera_pardus
ENSGMOG00000012139	si:ch211-275j6.5	79	64.407	ENSPTIG00000011744	C12orf65	71	64.407	Panthera_tigris_altaica
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSPTRG00000005595	C12H12orf65	70	64.103	Pan_troglodytes
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSPANG00000015388	C12orf65	71	64.103	Papio_anubis
ENSGMOG00000012139	si:ch211-275j6.5	88	67.910	ENSPKIG00000001571	si:ch211-275j6.5	80	67.910	Paramormyrops_kingsleyae
ENSGMOG00000012139	si:ch211-275j6.5	88	65.385	ENSPSIG00000013010	C12orf65	72	65.385	Pelodiscus_sinensis
ENSGMOG00000012139	si:ch211-275j6.5	100	66.216	ENSPMGG00000018342	si:ch211-275j6.5	87	66.216	Periophthalmus_magnuspinnatus
ENSGMOG00000012139	si:ch211-275j6.5	69	61.765	ENSPMAG00000000514	si:ch211-275j6.5	92	61.765	Petromyzon_marinus
ENSGMOG00000012139	si:ch211-275j6.5	98	57.823	ENSPCIG00000010996	C12orf65	83	57.823	Phascolarctos_cinereus
ENSGMOG00000012139	si:ch211-275j6.5	90	74.453	ENSPLAG00000001661	si:ch211-275j6.5	81	74.453	Poecilia_latipinna
ENSGMOG00000012139	si:ch211-275j6.5	89	75.573	ENSPMEG00000018566	si:ch211-275j6.5	78	75.573	Poecilia_mexicana
ENSGMOG00000012139	si:ch211-275j6.5	89	75.573	ENSPMEG00000009201	si:ch211-275j6.5	78	75.573	Poecilia_mexicana
ENSGMOG00000012139	si:ch211-275j6.5	83	76.423	ENSPREG00000021268	si:ch211-275j6.5	78	74.046	Poecilia_reticulata
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSPPYG00000005082	C12orf65	70	64.103	Pongo_abelii
ENSGMOG00000012139	si:ch211-275j6.5	59	64.773	ENSPCAG00000016193	C12orf65	73	59.504	Procavia_capensis
ENSGMOG00000012139	si:ch211-275j6.5	59	68.182	ENSPCOG00000021574	C12orf65	65	63.248	Propithecus_coquereli
ENSGMOG00000012139	si:ch211-275j6.5	85	61.538	ENSPVAG00000015301	C12orf65	78	61.538	Pteropus_vampyrus
ENSGMOG00000012139	si:ch211-275j6.5	89	77.099	ENSPNYG00000014456	si:ch211-275j6.5	81	77.099	Pundamilia_nyererei
ENSGMOG00000012139	si:ch211-275j6.5	84	71.429	ENSPNAG00000019769	si:ch211-275j6.5	75	71.429	Pygocentrus_nattereri
ENSGMOG00000012139	si:ch211-275j6.5	60	70.787	ENSRNOG00000001073	RGD1563482	65	65.254	Rattus_norvegicus
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSRBIG00000040789	C12orf65	70	64.103	Rhinopithecus_bieti
ENSGMOG00000012139	si:ch211-275j6.5	59	68.966	ENSRROG00000031384	C12orf65	69	63.248	Rhinopithecus_roxellana
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSSBOG00000026629	C12orf65	69	64.103	Saimiri_boliviensis_boliviensis
ENSGMOG00000012139	si:ch211-275j6.5	88	63.846	ENSSHAG00000014988	C12orf65	70	63.846	Sarcophilus_harrisii
ENSGMOG00000012139	si:ch211-275j6.5	90	68.421	ENSSFOG00015019122	si:ch211-275j6.5	76	68.421	Scleropages_formosus
ENSGMOG00000012139	si:ch211-275j6.5	82	78.512	ENSSMAG00000016770	si:ch211-275j6.5	82	71.942	Scophthalmus_maximus
ENSGMOG00000012139	si:ch211-275j6.5	97	67.133	ENSSDUG00000020401	si:ch211-275j6.5	89	67.133	Seriola_dumerili
ENSGMOG00000012139	si:ch211-275j6.5	100	68.000	ENSSLDG00000017638	si:ch211-275j6.5	89	68.000	Seriola_lalandi_dorsalis
ENSGMOG00000012139	si:ch211-275j6.5	85	64.286	ENSSPUG00000012613	C12orf65	76	64.286	Sphenodon_punctatus
ENSGMOG00000012139	si:ch211-275j6.5	100	68.667	ENSSPAG00000023476	si:ch211-275j6.5	89	68.667	Stegastes_partitus
ENSGMOG00000012139	si:ch211-275j6.5	72	62.727	ENSSSCG00000009774	C12orf65	74	62.727	Sus_scrofa
ENSGMOG00000012139	si:ch211-275j6.5	78	65.217	ENSTGUG00000005440	C12orf65	90	65.217	Taeniopygia_guttata
ENSGMOG00000012139	si:ch211-275j6.5	89	74.046	ENSTNIG00000015832	si:ch211-275j6.5	78	74.046	Tetraodon_nigroviridis
ENSGMOG00000012139	si:ch211-275j6.5	59	70.115	ENSTBEG00000012500	C12orf65	78	62.016	Tupaia_belangeri
ENSGMOG00000012139	si:ch211-275j6.5	71	65.714	ENSTTRG00000015880	C12orf65	68	64.035	Tursiops_truncatus
ENSGMOG00000012139	si:ch211-275j6.5	59	71.264	ENSUAMG00000019669	C12orf65	71	64.957	Ursus_americanus
ENSGMOG00000012139	si:ch211-275j6.5	59	71.264	ENSUMAG00000004025	C12orf65	71	64.957	Ursus_maritimus
ENSGMOG00000012139	si:ch211-275j6.5	64	68.367	ENSVVUG00000027811	C12orf65	78	61.538	Vulpes_vulpes
ENSGMOG00000012139	si:ch211-275j6.5	88	75.385	ENSXCOG00000000975	si:ch211-275j6.5	78	74.809	Xiphophorus_couchianus