EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000012210 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 7632 bases
Position: chrGeneScaffold_2427:75718-83349
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013072	PRP4	PF08799.11	1.1e-11	1	1
ENSGMOP00000013072	Prp18	PF02840.15	3.3e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013419	-	1014	-	ENSGMOP00000013072	338 (aa)	-	UPI00023F2528

Gene Model

Click here to download ENSGMOG00000012210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012210	prpf18	99	80.059	ENSG00000165630	PRPF18	99	80.059	Homo_sapiens
ENSGMOG00000012210	prpf18	99	87.941	ENSAPOG00000024177	prpf18	99	87.941	Acanthochromis_polyacanthus
ENSGMOG00000012210	prpf18	99	79.765	ENSAMEG00000013591	-	99	79.765	Ailuropoda_melanoleuca
ENSGMOG00000012210	prpf18	99	87.059	ENSACIG00000001186	prpf18	99	87.059	Amphilophus_citrinellus
ENSGMOG00000012210	prpf18	98	88.024	ENSAOCG00000006572	prpf18	94	85.673	Amphiprion_ocellaris
ENSGMOG00000012210	prpf18	99	88.235	ENSAPEG00000004564	prpf18	99	88.235	Amphiprion_percula
ENSGMOG00000012210	prpf18	99	87.353	ENSATEG00000000303	prpf18	99	87.353	Anabas_testudineus
ENSGMOG00000012210	prpf18	99	79.351	ENSAPLG00000003387	-	99	79.351	Anas_platyrhynchos
ENSGMOG00000012210	prpf18	99	79.300	ENSACAG00000000818	-	99	79.300	Anolis_carolinensis
ENSGMOG00000012210	prpf18	99	80.059	ENSANAG00000037445	-	99	80.059	Aotus_nancymaae
ENSGMOG00000012210	prpf18	99	86.765	ENSACLG00000026296	prpf18	99	86.765	Astatotilapia_calliptera
ENSGMOG00000012210	prpf18	99	84.241	ENSAMXG00000012848	prpf18	99	84.241	Astyanax_mexicanus
ENSGMOG00000012210	prpf18	99	79.765	ENSBTAG00000017244	PRPF18	99	79.765	Bos_taurus
ENSGMOG00000012210	prpf18	98	38.617	WBGene00009320	F32B6.3	97	38.617	Caenorhabditis_elegans
ENSGMOG00000012210	prpf18	99	80.059	ENSCJAG00000009432	-	99	80.059	Callithrix_jacchus
ENSGMOG00000012210	prpf18	99	79.765	ENSCAFG00000004735	-	99	79.765	Canis_familiaris
ENSGMOG00000012210	prpf18	99	79.765	ENSCAFG00020007712	-	99	79.765	Canis_lupus_dingo
ENSGMOG00000012210	prpf18	99	79.765	ENSCHIG00000000499	-	99	79.765	Capra_hircus
ENSGMOG00000012210	prpf18	99	79.472	ENSTSYG00000003517	-	99	79.472	Carlito_syrichta
ENSGMOG00000012210	prpf18	99	80.059	ENSCPOG00000021069	-	99	80.059	Cavia_porcellus
ENSGMOG00000012210	prpf18	99	80.059	ENSCCAG00000036822	-	99	80.059	Cebus_capucinus
ENSGMOG00000012210	prpf18	99	70.088	ENSCATG00000016633	-	99	70.088	Cercocebus_atys
ENSGMOG00000012210	prpf18	99	80.059	ENSCLAG00000011770	-	99	80.059	Chinchilla_lanigera
ENSGMOG00000012210	prpf18	99	78.286	ENSCSAG00000013109	-	99	78.286	Chlorocebus_sabaeus
ENSGMOG00000012210	prpf18	99	76.056	ENSCPBG00000003100	-	99	76.620	Chrysemys_picta_bellii
ENSGMOG00000012210	prpf18	99	56.598	ENSCING00000020481	-	98	56.598	Ciona_intestinalis
ENSGMOG00000012210	prpf18	99	56.725	ENSCSAVG00000010546	-	99	56.725	Ciona_savignyi
ENSGMOG00000012210	prpf18	99	80.059	ENSCANG00000034900	-	99	80.059	Colobus_angolensis_palliatus
ENSGMOG00000012210	prpf18	99	80.059	ENSCGRG00001023665	Prpf18	99	80.059	Cricetulus_griseus_chok1gshd
ENSGMOG00000012210	prpf18	99	80.059	ENSCGRG00000014690	Prpf18	99	80.059	Cricetulus_griseus_crigri
ENSGMOG00000012210	prpf18	99	85.588	ENSCSEG00000005536	prpf18	99	85.588	Cynoglossus_semilaevis
ENSGMOG00000012210	prpf18	99	87.059	ENSCVAG00000012401	prpf18	99	87.059	Cyprinodon_variegatus
ENSGMOG00000012210	prpf18	99	85.337	ENSDARG00000058306	prpf18	99	85.337	Danio_rerio
ENSGMOG00000012210	prpf18	99	79.765	ENSDNOG00000035607	-	99	79.765	Dasypus_novemcinctus
ENSGMOG00000012210	prpf18	99	79.472	ENSDORG00000000858	Prpf18	99	79.472	Dipodomys_ordii
ENSGMOG00000012210	prpf18	99	51.642	FBgn0027784	Prp18	98	51.642	Drosophila_melanogaster
ENSGMOG00000012210	prpf18	99	72.727	ENSETEG00000015060	-	99	72.727	Echinops_telfairi
ENSGMOG00000012210	prpf18	99	67.341	ENSEBUG00000016502	prpf18	99	67.341	Eptatretus_burgeri
ENSGMOG00000012210	prpf18	99	79.765	ENSEASG00005019373	-	99	79.765	Equus_asinus_asinus
ENSGMOG00000012210	prpf18	99	79.765	ENSECAG00000006997	PRPF18	99	79.765	Equus_caballus
ENSGMOG00000012210	prpf18	92	49.684	ENSEEUG00000001171	-	100	49.684	Erinaceus_europaeus
ENSGMOG00000012210	prpf18	99	87.427	ENSELUG00000022190	prpf18	99	87.427	Esox_lucius
ENSGMOG00000012210	prpf18	99	79.765	ENSFCAG00000004436	-	99	79.765	Felis_catus
ENSGMOG00000012210	prpf18	92	76.615	ENSFALG00000001912	-	97	76.923	Ficedula_albicollis
ENSGMOG00000012210	prpf18	99	54.651	ENSFDAG00000010713	-	97	54.651	Fukomys_damarensis
ENSGMOG00000012210	prpf18	93	81.191	ENSFDAG00000014026	-	99	81.191	Fukomys_damarensis
ENSGMOG00000012210	prpf18	80	92.647	ENSFHEG00000020125	prpf18	99	92.647	Fundulus_heteroclitus
ENSGMOG00000012210	prpf18	99	79.765	ENSGALG00000043593	-	99	79.765	Gallus_gallus
ENSGMOG00000012210	prpf18	99	86.471	ENSGAFG00000006034	prpf18	99	86.471	Gambusia_affinis
ENSGMOG00000012210	prpf18	99	87.059	ENSGACG00000012232	prpf18	99	87.059	Gasterosteus_aculeatus
ENSGMOG00000012210	prpf18	99	79.472	ENSGAGG00000016878	-	99	79.472	Gopherus_agassizii
ENSGMOG00000012210	prpf18	92	79.747	ENSGGOG00000025188	-	96	79.747	Gorilla_gorilla
ENSGMOG00000012210	prpf18	99	86.765	ENSHBUG00000010264	prpf18	99	86.765	Haplochromis_burtoni
ENSGMOG00000012210	prpf18	99	79.765	ENSHGLG00000018534	PRPF18	99	79.765	Heterocephalus_glaber_female
ENSGMOG00000012210	prpf18	93	80.878	ENSHGLG00100012161	-	98	80.878	Heterocephalus_glaber_male
ENSGMOG00000012210	prpf18	99	87.647	ENSHCOG00000015987	prpf18	99	87.647	Hippocampus_comes
ENSGMOG00000012210	prpf18	99	80.114	ENSIPUG00000007432	prpf18	99	80.398	Ictalurus_punctatus
ENSGMOG00000012210	prpf18	99	78.592	ENSSTOG00000008735	-	99	78.592	Ictidomys_tridecemlineatus
ENSGMOG00000012210	prpf18	99	80.059	ENSJJAG00000024041	-	99	80.059	Jaculus_jaculus
ENSGMOG00000012210	prpf18	99	59.649	ENSJJAG00000015191	-	99	59.649	Jaculus_jaculus
ENSGMOG00000012210	prpf18	99	86.471	ENSKMAG00000012124	prpf18	99	86.471	Kryptolebias_marmoratus
ENSGMOG00000012210	prpf18	99	84.118	ENSLBEG00000028466	prpf18	99	85.928	Labrus_bergylta
ENSGMOG00000012210	prpf18	99	78.886	ENSLACG00000009885	prpf18	99	79.765	Latimeria_chalumnae
ENSGMOG00000012210	prpf18	99	83.578	ENSLOCG00000016736	prpf18	99	83.578	Lepisosteus_oculatus
ENSGMOG00000012210	prpf18	99	80.059	ENSLAFG00000007753	-	99	80.059	Loxodonta_africana
ENSGMOG00000012210	prpf18	99	80.059	ENSMFAG00000000540	-	99	80.059	Macaca_fascicularis
ENSGMOG00000012210	prpf18	99	80.059	ENSMMUG00000015071	PRPF18	92	90.000	Macaca_mulatta
ENSGMOG00000012210	prpf18	99	80.059	ENSMNEG00000024679	-	99	80.059	Macaca_nemestrina
ENSGMOG00000012210	prpf18	99	64.809	ENSMLEG00000031715	-	99	64.809	Mandrillus_leucophaeus
ENSGMOG00000012210	prpf18	99	87.059	ENSMAMG00000006610	prpf18	99	87.059	Mastacembelus_armatus
ENSGMOG00000012210	prpf18	99	86.765	ENSMZEG00005019392	prpf18	99	86.765	Maylandia_zebra
ENSGMOG00000012210	prpf18	99	79.765	ENSMGAG00000005023	-	99	79.765	Meleagris_gallopavo
ENSGMOG00000012210	prpf18	99	80.352	ENSMICG00000006572	-	99	80.352	Microcebus_murinus
ENSGMOG00000012210	prpf18	99	80.059	ENSMOCG00000021468	Prpf18	99	80.059	Microtus_ochrogaster
ENSGMOG00000012210	prpf18	99	86.726	ENSMMOG00000013012	prpf18	99	86.726	Mola_mola
ENSGMOG00000012210	prpf18	99	74.780	ENSMODG00000024043	-	99	74.780	Monodelphis_domestica
ENSGMOG00000012210	prpf18	92	78.769	ENSMODG00000016902	-	91	78.769	Monodelphis_domestica
ENSGMOG00000012210	prpf18	99	80.523	ENSMALG00000005486	prpf18	99	80.523	Monopterus_albus
ENSGMOG00000012210	prpf18	99	80.352	MGP_CAROLIEiJ_G0023143	Prpf18	100	89.041	Mus_caroli
ENSGMOG00000012210	prpf18	99	80.645	ENSMUSG00000039449	Prpf18	100	89.041	Mus_musculus
ENSGMOG00000012210	prpf18	99	80.352	MGP_PahariEiJ_G0019203	Prpf18	100	89.041	Mus_pahari
ENSGMOG00000012210	prpf18	99	80.352	MGP_SPRETEiJ_G0024061	Prpf18	100	89.041	Mus_spretus
ENSGMOG00000012210	prpf18	99	79.472	ENSMPUG00000000938	-	99	79.472	Mustela_putorius_furo
ENSGMOG00000012210	prpf18	99	80.059	ENSMLUG00000009200	-	99	80.059	Myotis_lucifugus
ENSGMOG00000012210	prpf18	68	80.349	ENSNGAG00000023550	-	82	80.349	Nannospalax_galili
ENSGMOG00000012210	prpf18	99	80.059	ENSNGAG00000012500	-	99	80.059	Nannospalax_galili
ENSGMOG00000012210	prpf18	99	87.059	ENSNBRG00000001778	prpf18	99	87.059	Neolamprologus_brichardi
ENSGMOG00000012210	prpf18	99	80.059	ENSNLEG00000012186	-	99	80.059	Nomascus_leucogenys
ENSGMOG00000012210	prpf18	76	69.380	ENSMEUG00000005032	-	75	69.380	Notamacropus_eugenii
ENSGMOG00000012210	prpf18	77	60.755	ENSOPRG00000002153	-	100	60.755	Ochotona_princeps
ENSGMOG00000012210	prpf18	99	79.472	ENSODEG00000003770	-	99	79.472	Octodon_degus
ENSGMOG00000012210	prpf18	98	86.826	ENSONIG00000014854	prpf18	96	86.826	Oreochromis_niloticus
ENSGMOG00000012210	prpf18	99	80.352	ENSOANG00000015404	-	99	80.352	Ornithorhynchus_anatinus
ENSGMOG00000012210	prpf18	99	80.059	ENSOCUG00000027756	-	95	80.368	Oryctolagus_cuniculus
ENSGMOG00000012210	prpf18	99	84.814	ENSORLG00000010293	prpf18	99	84.814	Oryzias_latipes
ENSGMOG00000012210	prpf18	99	87.059	ENSORLG00020001530	prpf18	99	87.059	Oryzias_latipes_hni
ENSGMOG00000012210	prpf18	99	87.059	ENSORLG00015013705	prpf18	99	87.059	Oryzias_latipes_hsok
ENSGMOG00000012210	prpf18	99	87.059	ENSOMEG00000009167	prpf18	99	87.059	Oryzias_melastigma
ENSGMOG00000012210	prpf18	99	79.472	ENSOGAG00000007294	-	99	79.472	Otolemur_garnettii
ENSGMOG00000012210	prpf18	99	78.171	ENSOARG00000006243	-	99	78.171	Ovis_aries
ENSGMOG00000012210	prpf18	99	80.059	ENSPPAG00000041959	-	99	80.059	Pan_paniscus
ENSGMOG00000012210	prpf18	99	79.765	ENSPPRG00000000107	-	99	79.765	Panthera_pardus
ENSGMOG00000012210	prpf18	99	79.765	ENSPTIG00000021094	-	99	79.765	Panthera_tigris_altaica
ENSGMOG00000012210	prpf18	99	80.059	ENSPTRG00000002306	PRPF18	99	80.059	Pan_troglodytes
ENSGMOG00000012210	prpf18	99	79.765	ENSPANG00000023346	-	99	79.765	Papio_anubis
ENSGMOG00000012210	prpf18	86	98.113	ENSPKIG00000014128	prpf18	95	82.286	Paramormyrops_kingsleyae
ENSGMOG00000012210	prpf18	99	79.472	ENSPSIG00000016064	-	99	79.472	Pelodiscus_sinensis
ENSGMOG00000012210	prpf18	99	79.179	ENSPMGG00000016486	prpf18	99	79.179	Periophthalmus_magnuspinnatus
ENSGMOG00000012210	prpf18	99	80.059	ENSPEMG00000013704	Prpf18	99	80.059	Peromyscus_maniculatus_bairdii
ENSGMOG00000012210	prpf18	99	74.709	ENSPMAG00000000204	prpf18	99	74.709	Petromyzon_marinus
ENSGMOG00000012210	prpf18	92	79.430	ENSPCIG00000012963	-	99	79.430	Phascolarctos_cinereus
ENSGMOG00000012210	prpf18	99	83.954	ENSPFOG00000017611	prpf18	99	83.954	Poecilia_formosa
ENSGMOG00000012210	prpf18	99	86.176	ENSPLAG00000000369	prpf18	99	86.176	Poecilia_latipinna
ENSGMOG00000012210	prpf18	99	86.471	ENSPMEG00000005183	prpf18	99	86.471	Poecilia_mexicana
ENSGMOG00000012210	prpf18	99	86.176	ENSPREG00000015232	prpf18	99	86.176	Poecilia_reticulata
ENSGMOG00000012210	prpf18	99	80.059	ENSPPYG00000002101	PRPF18	99	80.059	Pongo_abelii
ENSGMOG00000012210	prpf18	99	61.877	ENSPCAG00000010833	-	99	61.877	Procavia_capensis
ENSGMOG00000012210	prpf18	99	76.855	ENSPCOG00000013057	-	99	76.855	Propithecus_coquereli
ENSGMOG00000012210	prpf18	99	48.974	ENSPVAG00000002947	-	99	48.974	Pteropus_vampyrus
ENSGMOG00000012210	prpf18	99	86.765	ENSPNYG00000003554	prpf18	99	86.765	Pundamilia_nyererei
ENSGMOG00000012210	prpf18	99	84.286	ENSPNAG00000023151	prpf18	99	84.286	Pygocentrus_nattereri
ENSGMOG00000012210	prpf18	99	80.059	ENSRNOG00000018396	Prpf18	99	80.059	Rattus_norvegicus
ENSGMOG00000012210	prpf18	99	80.352	ENSRBIG00000028028	-	99	80.352	Rhinopithecus_bieti
ENSGMOG00000012210	prpf18	99	80.059	ENSRROG00000040695	-	99	80.059	Rhinopithecus_roxellana
ENSGMOG00000012210	prpf18	99	80.059	ENSSBOG00000034482	-	99	80.059	Saimiri_boliviensis_boliviensis
ENSGMOG00000012210	prpf18	99	68.328	ENSSHAG00000009669	-	99	68.328	Sarcophilus_harrisii
ENSGMOG00000012210	prpf18	99	79.765	ENSSHAG00000016463	-	99	79.765	Sarcophilus_harrisii
ENSGMOG00000012210	prpf18	98	79.710	ENSSFOG00015022118	prpf18	99	75.434	Scleropages_formosus
ENSGMOG00000012210	prpf18	77	44.828	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSGMOG00000012210	prpf18	99	85.882	ENSSMAG00000005308	prpf18	99	85.882	Scophthalmus_maximus
ENSGMOG00000012210	prpf18	99	88.235	ENSSDUG00000015428	prpf18	99	88.235	Seriola_dumerili
ENSGMOG00000012210	prpf18	99	87.941	ENSSLDG00000023989	prpf18	99	87.941	Seriola_lalandi_dorsalis
ENSGMOG00000012210	prpf18	99	51.906	ENSSARG00000005307	-	99	51.906	Sorex_araneus
ENSGMOG00000012210	prpf18	99	80.059	ENSSPUG00000002619	-	99	80.059	Sphenodon_punctatus
ENSGMOG00000012210	prpf18	99	89.118	ENSSPAG00000019502	prpf18	99	89.118	Stegastes_partitus
ENSGMOG00000012210	prpf18	99	79.765	ENSSSCG00000026354	-	99	79.765	Sus_scrofa
ENSGMOG00000012210	prpf18	99	79.179	ENSTGUG00000002286	-	99	79.179	Taeniopygia_guttata
ENSGMOG00000012210	prpf18	99	84.706	ENSTRUG00000011278	prpf18	99	84.706	Takifugu_rubripes
ENSGMOG00000012210	prpf18	99	84.412	ENSTNIG00000000911	prpf18	99	84.412	Tetraodon_nigroviridis
ENSGMOG00000012210	prpf18	79	94.805	ENSTBEG00000013011	-	79	94.805	Tupaia_belangeri
ENSGMOG00000012210	prpf18	99	80.352	ENSTTRG00000011117	PRPF18	99	80.352	Tursiops_truncatus
ENSGMOG00000012210	prpf18	91	81.613	ENSUAMG00000001815	-	93	81.613	Ursus_americanus
ENSGMOG00000012210	prpf18	99	74.780	ENSUMAG00000012329	-	99	74.780	Ursus_maritimus
ENSGMOG00000012210	prpf18	99	73.900	ENSVPAG00000011486	-	99	73.900	Vicugna_pacos
ENSGMOG00000012210	prpf18	99	79.765	ENSVVUG00000005453	-	99	79.765	Vulpes_vulpes
ENSGMOG00000012210	prpf18	99	75.291	ENSXETG00000024057	prpf18	99	75.291	Xenopus_tropicalis
ENSGMOG00000012210	prpf18	99	86.804	ENSXCOG00000020414	prpf18	99	86.804	Xiphophorus_couchianus
ENSGMOG00000012210	prpf18	99	87.059	ENSXMAG00000004713	prpf18	90	87.059	Xiphophorus_maculatus