EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000012275 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 13617 bases
Position: chrGeneScaffold_299:123790-137406
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013142	Suf	PF05843.14	7.7e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013491	-	2157	-	ENSGMOP00000013142	718 (aa)	-	UPI00023F2655

Gene Model

Click here to download ENSGMOG00000012275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012275	cstf3	100	89.430	ENSG00000176102	CSTF3	100	89.430	Homo_sapiens
ENSGMOG00000012275	cstf3	100	95.125	ENSAPOG00000014054	cstf3	100	95.125	Acanthochromis_polyacanthus
ENSGMOG00000012275	cstf3	99	89.845	ENSAMEG00000007187	CSTF3	98	89.845	Ailuropoda_melanoleuca
ENSGMOG00000012275	cstf3	87	89.280	ENSACIG00000005539	cstf3	100	89.280	Amphilophus_citrinellus
ENSGMOG00000012275	cstf3	100	95.125	ENSAOCG00000010930	cstf3	100	95.125	Amphiprion_ocellaris
ENSGMOG00000012275	cstf3	100	95.125	ENSAPEG00000007903	cstf3	100	95.125	Amphiprion_percula
ENSGMOG00000012275	cstf3	100	94.290	ENSATEG00000000190	cstf3	100	94.290	Anabas_testudineus
ENSGMOG00000012275	cstf3	99	90.127	ENSAPLG00000007217	CSTF3	100	90.127	Anas_platyrhynchos
ENSGMOG00000012275	cstf3	100	89.708	ENSACAG00000002823	CSTF3	100	89.708	Anolis_carolinensis
ENSGMOG00000012275	cstf3	100	89.430	ENSANAG00000020699	CSTF3	94	95.547	Aotus_nancymaae
ENSGMOG00000012275	cstf3	98	94.326	ENSACLG00000007820	cstf3	100	93.454	Astatotilapia_calliptera
ENSGMOG00000012275	cstf3	100	91.516	ENSAMXG00000014198	cstf3	100	91.655	Astyanax_mexicanus
ENSGMOG00000012275	cstf3	100	89.430	ENSBTAG00000008617	CSTF3	100	89.778	Bos_taurus
ENSGMOG00000012275	cstf3	97	47.305	WBGene00006307	suf-1	99	47.305	Caenorhabditis_elegans
ENSGMOG00000012275	cstf3	100	89.430	ENSCJAG00000005533	CSTF3	100	89.457	Callithrix_jacchus
ENSGMOG00000012275	cstf3	100	89.430	ENSCAFG00000007264	CSTF3	100	89.430	Canis_familiaris
ENSGMOG00000012275	cstf3	99	89.986	ENSCAFG00020002715	CSTF3	98	89.986	Canis_lupus_dingo
ENSGMOG00000012275	cstf3	98	88.636	ENSCHIG00000016418	CSTF3	100	89.457	Capra_hircus
ENSGMOG00000012275	cstf3	99	90.127	ENSTSYG00000000451	CSTF3	99	95.768	Carlito_syrichta
ENSGMOG00000012275	cstf3	83	87.470	ENSCAPG00000010958	CSTF3	98	87.470	Cavia_aperea
ENSGMOG00000012275	cstf3	100	89.430	ENSCPOG00000005545	CSTF3	100	89.510	Cavia_porcellus
ENSGMOG00000012275	cstf3	100	89.430	ENSCCAG00000024790	CSTF3	96	95.768	Cebus_capucinus
ENSGMOG00000012275	cstf3	100	89.430	ENSCATG00000007080	CSTF3	100	89.457	Cercocebus_atys
ENSGMOG00000012275	cstf3	100	89.430	ENSCLAG00000016179	CSTF3	100	89.430	Chinchilla_lanigera
ENSGMOG00000012275	cstf3	78	96.617	ENSCHOG00000002497	CSTF3	79	96.617	Choloepus_hoffmanni
ENSGMOG00000012275	cstf3	100	89.708	ENSCPBG00000006753	CSTF3	100	89.708	Chrysemys_picta_bellii
ENSGMOG00000012275	cstf3	99	61.219	ENSCING00000006401	-	99	61.219	Ciona_intestinalis
ENSGMOG00000012275	cstf3	98	60.644	ENSCSAVG00000004851	-	100	60.644	Ciona_savignyi
ENSGMOG00000012275	cstf3	100	89.430	ENSCANG00000035468	CSTF3	100	89.457	Colobus_angolensis_palliatus
ENSGMOG00000012275	cstf3	100	89.291	ENSCGRG00001014773	Cstf3	100	89.291	Cricetulus_griseus_chok1gshd
ENSGMOG00000012275	cstf3	100	89.291	ENSCGRG00000004142	Cstf3	100	89.291	Cricetulus_griseus_crigri
ENSGMOG00000012275	cstf3	100	94.708	ENSCSEG00000014283	cstf3	100	94.708	Cynoglossus_semilaevis
ENSGMOG00000012275	cstf3	100	93.315	ENSCVAG00000019739	cstf3	100	93.315	Cyprinodon_variegatus
ENSGMOG00000012275	cstf3	100	92.479	ENSDARG00000018904	cstf3	100	92.479	Danio_rerio
ENSGMOG00000012275	cstf3	99	89.845	ENSDNOG00000007366	CSTF3	99	89.845	Dasypus_novemcinctus
ENSGMOG00000012275	cstf3	99	82.394	ENSDORG00000005898	Cstf3	99	82.394	Dipodomys_ordii
ENSGMOG00000012275	cstf3	98	56.328	FBgn0003559	su(f)	97	56.328	Drosophila_melanogaster
ENSGMOG00000012275	cstf3	89	84.448	ENSETEG00000017097	CSTF3	90	84.448	Echinops_telfairi
ENSGMOG00000012275	cstf3	84	74.295	ENSEBUG00000015459	cstf3	96	74.295	Eptatretus_burgeri
ENSGMOG00000012275	cstf3	99	88.575	ENSEASG00005019884	CSTF3	96	95.768	Equus_asinus_asinus
ENSGMOG00000012275	cstf3	99	88.575	ENSECAG00000023338	CSTF3	96	95.768	Equus_caballus
ENSGMOG00000012275	cstf3	100	84.284	ENSEEUG00000015167	CSTF3	100	84.284	Erinaceus_europaeus
ENSGMOG00000012275	cstf3	100	93.463	ENSELUG00000023393	cstf3	100	93.463	Esox_lucius
ENSGMOG00000012275	cstf3	100	89.430	ENSFCAG00000030711	CSTF3	100	89.430	Felis_catus
ENSGMOG00000012275	cstf3	92	92.018	ENSFALG00000010764	CSTF3	100	88.957	Ficedula_albicollis
ENSGMOG00000012275	cstf3	100	89.430	ENSFDAG00000012082	CSTF3	100	89.430	Fukomys_damarensis
ENSGMOG00000012275	cstf3	100	93.454	ENSFHEG00000020623	cstf3	100	93.454	Fundulus_heteroclitus
ENSGMOG00000012275	cstf3	100	89.430	ENSGALG00000011685	CSTF3	100	89.430	Gallus_gallus
ENSGMOG00000012275	cstf3	100	93.454	ENSGAFG00000002181	cstf3	100	93.454	Gambusia_affinis
ENSGMOG00000012275	cstf3	100	95.265	ENSGACG00000015997	cstf3	100	95.265	Gasterosteus_aculeatus
ENSGMOG00000012275	cstf3	100	89.847	ENSGAGG00000006200	CSTF3	100	89.847	Gopherus_agassizii
ENSGMOG00000012275	cstf3	99	84.203	ENSGGOG00000026591	CSTF3	96	90.869	Gorilla_gorilla
ENSGMOG00000012275	cstf3	98	94.468	ENSHBUG00000016656	cstf3	100	93.593	Haplochromis_burtoni
ENSGMOG00000012275	cstf3	100	89.291	ENSHGLG00000017834	CSTF3	100	89.291	Heterocephalus_glaber_female
ENSGMOG00000012275	cstf3	100	89.291	ENSHGLG00100018042	CSTF3	100	89.291	Heterocephalus_glaber_male
ENSGMOG00000012275	cstf3	100	92.201	ENSHCOG00000015218	cstf3	100	92.201	Hippocampus_comes
ENSGMOG00000012275	cstf3	100	93.036	ENSIPUG00000013170	CSTF3	100	93.036	Ictalurus_punctatus
ENSGMOG00000012275	cstf3	100	89.430	ENSSTOG00000013306	CSTF3	100	89.430	Ictidomys_tridecemlineatus
ENSGMOG00000012275	cstf3	99	79.832	ENSJJAG00000018430	Cstf3	99	79.832	Jaculus_jaculus
ENSGMOG00000012275	cstf3	100	92.618	ENSKMAG00000010916	cstf3	100	92.618	Kryptolebias_marmoratus
ENSGMOG00000012275	cstf3	100	94.429	ENSLBEG00000002306	cstf3	100	94.429	Labrus_bergylta
ENSGMOG00000012275	cstf3	100	89.554	ENSLACG00000017296	CSTF3	100	89.554	Latimeria_chalumnae
ENSGMOG00000012275	cstf3	100	92.211	ENSLOCG00000004415	cstf3	100	92.211	Lepisosteus_oculatus
ENSGMOG00000012275	cstf3	100	89.291	ENSLAFG00000008712	CSTF3	100	89.291	Loxodonta_africana
ENSGMOG00000012275	cstf3	100	89.430	ENSMFAG00000029516	CSTF3	100	89.457	Macaca_fascicularis
ENSGMOG00000012275	cstf3	100	89.430	ENSMMUG00000002542	CSTF3	100	89.430	Macaca_mulatta
ENSGMOG00000012275	cstf3	100	89.430	ENSMNEG00000021807	CSTF3	100	89.457	Macaca_nemestrina
ENSGMOG00000012275	cstf3	100	89.430	ENSMLEG00000039594	CSTF3	97	93.541	Mandrillus_leucophaeus
ENSGMOG00000012275	cstf3	100	94.708	ENSMAMG00000020423	cstf3	100	94.708	Mastacembelus_armatus
ENSGMOG00000012275	cstf3	98	94.326	ENSMZEG00005012082	cstf3	100	93.454	Maylandia_zebra
ENSGMOG00000012275	cstf3	100	89.291	ENSMGAG00000001383	CSTF3	100	89.291	Meleagris_gallopavo
ENSGMOG00000012275	cstf3	100	89.291	ENSMAUG00000002487	Cstf3	100	89.291	Mesocricetus_auratus
ENSGMOG00000012275	cstf3	100	89.291	ENSMICG00000004784	CSTF3	100	89.297	Microcebus_murinus
ENSGMOG00000012275	cstf3	100	89.291	ENSMOCG00000017583	Cstf3	100	89.291	Microtus_ochrogaster
ENSGMOG00000012275	cstf3	99	94.085	ENSMMOG00000016026	cstf3	95	94.085	Mola_mola
ENSGMOG00000012275	cstf3	100	78.999	ENSMODG00000025205	-	100	78.999	Monodelphis_domestica
ENSGMOG00000012275	cstf3	100	89.569	ENSMODG00000009745	-	100	89.569	Monodelphis_domestica
ENSGMOG00000012275	cstf3	100	94.429	ENSMALG00000012050	cstf3	100	94.429	Monopterus_albus
ENSGMOG00000012275	cstf3	100	89.291	MGP_CAROLIEiJ_G0024026	Cstf3	100	89.291	Mus_caroli
ENSGMOG00000012275	cstf3	100	89.291	ENSMUSG00000027176	Cstf3	100	89.291	Mus_musculus
ENSGMOG00000012275	cstf3	100	89.291	MGP_PahariEiJ_G0025464	Cstf3	100	89.291	Mus_pahari
ENSGMOG00000012275	cstf3	100	89.291	MGP_SPRETEiJ_G0024939	Cstf3	100	89.291	Mus_spretus
ENSGMOG00000012275	cstf3	100	89.291	ENSMPUG00000011457	CSTF3	100	89.291	Mustela_putorius_furo
ENSGMOG00000012275	cstf3	100	86.926	ENSMLUG00000026022	-	100	86.926	Myotis_lucifugus
ENSGMOG00000012275	cstf3	99	89.986	ENSMLUG00000003073	-	99	89.986	Myotis_lucifugus
ENSGMOG00000012275	cstf3	100	89.152	ENSNGAG00000010677	Cstf3	100	89.152	Nannospalax_galili
ENSGMOG00000012275	cstf3	87	94.240	ENSNBRG00000007345	cstf3	100	94.240	Neolamprologus_brichardi
ENSGMOG00000012275	cstf3	100	89.430	ENSNLEG00000017901	CSTF3	97	93.318	Nomascus_leucogenys
ENSGMOG00000012275	cstf3	73	88.910	ENSMEUG00000005640	-	100	88.910	Notamacropus_eugenii
ENSGMOG00000012275	cstf3	67	88.158	ENSOPRG00000000199	-	67	88.158	Ochotona_princeps
ENSGMOG00000012275	cstf3	100	89.291	ENSODEG00000016737	-	100	89.291	Octodon_degus
ENSGMOG00000012275	cstf3	89	77.708	ENSODEG00000006311	-	97	77.708	Octodon_degus
ENSGMOG00000012275	cstf3	98	94.326	ENSONIG00000005563	cstf3	100	93.454	Oreochromis_niloticus
ENSGMOG00000012275	cstf3	90	88.786	ENSOANG00000015140	CSTF3	100	88.786	Ornithorhynchus_anatinus
ENSGMOG00000012275	cstf3	100	89.152	ENSOCUG00000015417	CSTF3	100	89.152	Oryctolagus_cuniculus
ENSGMOG00000012275	cstf3	100	92.758	ENSORLG00000009762	cstf3	100	92.758	Oryzias_latipes
ENSGMOG00000012275	cstf3	100	92.758	ENSORLG00020005540	cstf3	100	92.758	Oryzias_latipes_hni
ENSGMOG00000012275	cstf3	100	92.618	ENSORLG00015003551	cstf3	100	92.618	Oryzias_latipes_hsok
ENSGMOG00000012275	cstf3	100	93.175	ENSOMEG00000003848	cstf3	100	93.175	Oryzias_melastigma
ENSGMOG00000012275	cstf3	100	89.058	ENSOGAG00000010229	CSTF3	100	89.058	Otolemur_garnettii
ENSGMOG00000012275	cstf3	90	89.441	ENSOARG00000017271	CSTF3	99	89.441	Ovis_aries
ENSGMOG00000012275	cstf3	99	86.460	ENSPPAG00000027358	CSTF3	99	86.460	Pan_paniscus
ENSGMOG00000012275	cstf3	100	89.430	ENSPPRG00000016852	CSTF3	100	89.430	Panthera_pardus
ENSGMOG00000012275	cstf3	100	89.430	ENSPTIG00000008716	CSTF3	100	89.430	Panthera_tigris_altaica
ENSGMOG00000012275	cstf3	100	89.430	ENSPTRG00000003485	CSTF3	100	89.430	Pan_troglodytes
ENSGMOG00000012275	cstf3	100	89.430	ENSPANG00000013722	CSTF3	97	93.541	Papio_anubis
ENSGMOG00000012275	cstf3	100	92.201	ENSPKIG00000023648	cstf3	100	92.201	Paramormyrops_kingsleyae
ENSGMOG00000012275	cstf3	100	89.847	ENSPSIG00000009173	CSTF3	100	89.847	Pelodiscus_sinensis
ENSGMOG00000012275	cstf3	76	96.168	ENSPMGG00000000164	cstf3	99	96.168	Periophthalmus_magnuspinnatus
ENSGMOG00000012275	cstf3	100	89.152	ENSPEMG00000011481	Cstf3	100	89.152	Peromyscus_maniculatus_bairdii
ENSGMOG00000012275	cstf3	99	78.261	ENSPMAG00000007282	cstf3	100	77.701	Petromyzon_marinus
ENSGMOG00000012275	cstf3	100	75.694	ENSPCIG00000030419	-	90	75.972	Phascolarctos_cinereus
ENSGMOG00000012275	cstf3	100	86.806	ENSPCIG00000026406	-	100	89.457	Phascolarctos_cinereus
ENSGMOG00000012275	cstf3	100	93.315	ENSPFOG00000017239	cstf3	100	93.315	Poecilia_formosa
ENSGMOG00000012275	cstf3	100	93.454	ENSPLAG00000009456	cstf3	100	93.454	Poecilia_latipinna
ENSGMOG00000012275	cstf3	100	93.315	ENSPMEG00000010320	cstf3	100	93.315	Poecilia_mexicana
ENSGMOG00000012275	cstf3	100	93.175	ENSPREG00000013549	cstf3	100	93.175	Poecilia_reticulata
ENSGMOG00000012275	cstf3	100	89.430	ENSPPYG00000003375	CSTF3	100	89.430	Pongo_abelii
ENSGMOG00000012275	cstf3	71	95.122	ENSPCAG00000008025	-	71	95.122	Procavia_capensis
ENSGMOG00000012275	cstf3	100	84.145	ENSPCOG00000014417	CSTF3	100	84.145	Propithecus_coquereli
ENSGMOG00000012275	cstf3	100	84.284	ENSPVAG00000002350	CSTF3	100	84.284	Pteropus_vampyrus
ENSGMOG00000012275	cstf3	98	94.468	ENSPNYG00000018259	cstf3	100	93.593	Pundamilia_nyererei
ENSGMOG00000012275	cstf3	100	93.454	ENSPNAG00000020182	cstf3	100	93.454	Pygocentrus_nattereri
ENSGMOG00000012275	cstf3	87	88.978	ENSRNOG00000012089	Cstf3	100	88.978	Rattus_norvegicus
ENSGMOG00000012275	cstf3	99	88.575	ENSRBIG00000044258	CSTF3	100	89.457	Rhinopithecus_bieti
ENSGMOG00000012275	cstf3	100	89.430	ENSRROG00000043450	CSTF3	100	89.457	Rhinopithecus_roxellana
ENSGMOG00000012275	cstf3	100	89.430	ENSSBOG00000024764	CSTF3	98	95.768	Saimiri_boliviensis_boliviensis
ENSGMOG00000012275	cstf3	100	80.668	ENSSHAG00000003135	-	99	80.668	Sarcophilus_harrisii
ENSGMOG00000012275	cstf3	99	89.986	ENSSHAG00000018128	-	99	89.986	Sarcophilus_harrisii
ENSGMOG00000012275	cstf3	100	92.201	ENSSFOG00015022133	cstf3	100	92.201	Scleropages_formosus
ENSGMOG00000012275	cstf3	100	95.125	ENSSMAG00000002197	cstf3	100	95.125	Scophthalmus_maximus
ENSGMOG00000012275	cstf3	100	94.847	ENSSDUG00000020426	cstf3	100	94.847	Seriola_dumerili
ENSGMOG00000012275	cstf3	100	94.847	ENSSLDG00000025649	cstf3	100	94.847	Seriola_lalandi_dorsalis
ENSGMOG00000012275	cstf3	100	89.291	ENSSARG00000000391	CSTF3	100	89.291	Sorex_araneus
ENSGMOG00000012275	cstf3	96	90.029	ENSSPUG00000010546	CSTF3	100	90.029	Sphenodon_punctatus
ENSGMOG00000012275	cstf3	100	95.125	ENSSPAG00000004958	cstf3	100	95.125	Stegastes_partitus
ENSGMOG00000012275	cstf3	99	88.982	ENSSSCG00000040954	CSTF3	100	88.982	Sus_scrofa
ENSGMOG00000012275	cstf3	99	89.845	ENSTGUG00000005010	CSTF3	100	89.845	Taeniopygia_guttata
ENSGMOG00000012275	cstf3	100	93.315	ENSTRUG00000004959	cstf3	100	93.315	Takifugu_rubripes
ENSGMOG00000012275	cstf3	99	93.803	ENSTNIG00000013811	cstf3	99	93.803	Tetraodon_nigroviridis
ENSGMOG00000012275	cstf3	89	86.781	ENSTBEG00000001544	CSTF3	90	86.781	Tupaia_belangeri
ENSGMOG00000012275	cstf3	100	86.648	ENSTTRG00000016366	CSTF3	100	86.648	Tursiops_truncatus
ENSGMOG00000012275	cstf3	99	89.704	ENSUMAG00000018971	CSTF3	100	89.137	Ursus_maritimus
ENSGMOG00000012275	cstf3	100	89.291	ENSVPAG00000007800	CSTF3	100	89.291	Vicugna_pacos
ENSGMOG00000012275	cstf3	99	89.986	ENSVVUG00000014938	CSTF3	100	89.457	Vulpes_vulpes
ENSGMOG00000012275	cstf3	88	73.791	ENSXETG00000021399	cstf3	100	74.798	Xenopus_tropicalis
ENSGMOG00000012275	cstf3	66	41.909	ENSXETG00000017946	-	99	41.909	Xenopus_tropicalis
ENSGMOG00000012275	cstf3	87	93.440	ENSXCOG00000011741	cstf3	100	93.440	Xiphophorus_couchianus
ENSGMOG00000012275	cstf3	100	93.315	ENSXMAG00000009545	cstf3	100	93.315	Xiphophorus_maculatus