EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000012335 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 6397 bases
Position: chrGeneScaffold_2105:261664-268060
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013201	MMR_HSR1	PF01926.23	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013552	-	711	-	ENSGMOP00000013201	237 (aa)	-	UPI00023F277D

Gene Model

Click here to download ENSGMOG00000012335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000012335	rab12	69	35.119	ENSGMOG00000020144	rab9a	82	35.119
ENSGMOG00000012335	rab12	67	39.623	ENSGMOG00000007127	RAB5A	86	39.623
ENSGMOG00000012335	rab12	71	43.860	ENSGMOG00000010808	RAB39B	80	43.860
ENSGMOG00000012335	rab12	77	43.169	ENSGMOG00000001834	rab4b	88	43.169
ENSGMOG00000012335	rab12	69	34.524	ENSGMOG00000020148	-	87	34.524
ENSGMOG00000012335	rab12	78	47.368	ENSGMOG00000010022	-	90	47.368
ENSGMOG00000012335	rab12	67	41.718	ENSGMOG00000006175	rab33a	69	41.718
ENSGMOG00000012335	rab12	66	36.025	ENSGMOG00000007140	rab34b	77	36.025
ENSGMOG00000012335	rab12	69	40.491	ENSGMOG00000006968	-	81	40.491
ENSGMOG00000012335	rab12	77	37.158	ENSGMOG00000002868	rab5aa	80	37.158
ENSGMOG00000012335	rab12	68	46.296	ENSGMOG00000017688	rab35b	80	46.296
ENSGMOG00000012335	rab12	70	42.604	ENSGMOG00000004096	-	77	42.604
ENSGMOG00000012335	rab12	66	40.385	ENSGMOG00000004095	rab41	73	40.385
ENSGMOG00000012335	rab12	65	43.506	ENSGMOG00000011766	-	98	43.506
ENSGMOG00000012335	rab12	78	40.838	ENSGMOG00000000885	rab33ba	83	41.573
ENSGMOG00000012335	rab12	70	37.427	ENSGMOG00000017644	si:ch211-247i17.1	97	37.427
ENSGMOG00000012335	rab12	73	41.618	ENSGMOG00000000532	-	80	41.618
ENSGMOG00000012335	rab12	65	39.873	ENSGMOG00000014481	rab36	83	39.873
ENSGMOG00000012335	rab12	66	33.951	ENSGMOG00000018475	RAB29	97	33.951
ENSGMOG00000012335	rab12	70	45.238	ENSGMOG00000016608	rab18b	81	45.238
ENSGMOG00000012335	rab12	71	43.860	ENSGMOG00000008450	-	79	43.860
ENSGMOG00000012335	rab12	77	43.956	ENSGMOG00000002552	rab30	89	43.956
ENSGMOG00000012335	rab12	67	43.558	ENSGMOG00000011665	zgc:101559	77	43.558
ENSGMOG00000012335	rab12	70	39.053	ENSGMOG00000011308	-	81	39.053
ENSGMOG00000012335	rab12	74	33.523	ENSGMOG00000018741	-	83	33.523
ENSGMOG00000012335	rab12	70	51.515	ENSGMOG00000004888	rab1ab	91	48.619
ENSGMOG00000012335	rab12	70	44.242	ENSGMOG00000009668	-	75	44.242
ENSGMOG00000012335	rab12	76	37.989	ENSGMOG00000001876	-	99	38.764
ENSGMOG00000012335	rab12	67	44.937	ENSGMOG00000006444	rab25b	93	44.937
ENSGMOG00000012335	rab12	69	30.061	ENSGMOG00000018928	rabl2	80	30.061
ENSGMOG00000012335	rab12	77	39.683	ENSGMOG00000003577	-	94	39.683
ENSGMOG00000012335	rab12	57	37.037	ENSGMOG00000019073	-	65	37.037
ENSGMOG00000012335	rab12	69	35.714	ENSGMOG00000020194	rab9b	82	35.714
ENSGMOG00000012335	rab12	70	39.053	ENSGMOG00000007712	RAB7A	81	39.053
ENSGMOG00000012335	rab12	70	44.848	ENSGMOG00000009211	rab11bb	75	44.848
ENSGMOG00000012335	rab12	78	43.850	ENSGMOG00000004979	-	87	43.850
ENSGMOG00000012335	rab12	70	45.181	ENSGMOG00000016277	RAB15	78	45.181
ENSGMOG00000012335	rab12	68	31.325	ENSGMOG00000010581	kras	91	31.638
ENSGMOG00000012335	rab12	69	38.415	ENSGMOG00000015174	si:dkey-16l2.16	99	38.415
ENSGMOG00000012335	rab12	70	43.636	ENSGMOG00000007390	rab11ba	75	43.636
ENSGMOG00000012335	rab12	68	30.247	ENSGMOG00000010196	hrasb	94	31.111
ENSGMOG00000012335	rab12	69	36.810	ENSGMOG00000013070	rab22a	84	36.810
ENSGMOG00000012335	rab12	67	30.818	ENSGMOG00000007564	rhebl1	85	30.818
ENSGMOG00000012335	rab12	62	30.872	ENSGMOG00000012623	si:ch73-116o1.2	90	31.250
ENSGMOG00000012335	rab12	69	39.264	ENSGMOG00000015096	rab5c	74	39.264
ENSGMOG00000012335	rab12	77	40.659	ENSGMOG00000008355	rab11a	83	40.659
ENSGMOG00000012335	rab12	76	48.619	ENSGMOG00000007293	rab1ba	89	48.619
ENSGMOG00000012335	rab12	72	34.503	ENSGMOG00000005102	rab23	77	33.333
ENSGMOG00000012335	rab12	68	43.478	ENSGMOG00000006450	rab11al	79	43.478
ENSGMOG00000012335	rab12	72	46.199	ENSGMOG00000003610	rab15	80	46.199

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012335	rab12	87	85.577	ENSG00000206418	RAB12	85	85.577	Homo_sapiens
ENSGMOG00000012335	rab12	77	81.421	ENSAMEG00000007452	RAB12	79	81.421	Ailuropoda_melanoleuca
ENSGMOG00000012335	rab12	87	89.524	ENSACIG00000020616	rab12	86	90.952	Amphilophus_citrinellus
ENSGMOG00000012335	rab12	87	91.388	ENSAOCG00000002130	rab12	86	92.823	Amphiprion_ocellaris
ENSGMOG00000012335	rab12	87	91.388	ENSAPEG00000013255	rab12	86	92.823	Amphiprion_percula
ENSGMOG00000012335	rab12	87	90.385	ENSATEG00000019683	rab12	86	92.308	Anabas_testudineus
ENSGMOG00000012335	rab12	77	87.978	ENSACAG00000003360	RAB12	72	87.166	Anolis_carolinensis
ENSGMOG00000012335	rab12	87	91.388	ENSACLG00000007696	rab12	86	92.823	Astatotilapia_calliptera
ENSGMOG00000012335	rab12	87	88.208	ENSAMXG00000004882	rab12	86	88.208	Astyanax_mexicanus
ENSGMOG00000012335	rab12	87	84.615	ENSBTAG00000010356	RAB12	85	84.615	Bos_taurus
ENSGMOG00000012335	rab12	87	85.167	ENSCJAG00000015468	RAB12	61	85.167	Callithrix_jacchus
ENSGMOG00000012335	rab12	87	85.577	ENSCAFG00020023721	RAB12	71	85.577	Canis_lupus_dingo
ENSGMOG00000012335	rab12	87	84.615	ENSCHIG00000016103	RAB12	85	84.615	Capra_hircus
ENSGMOG00000012335	rab12	73	89.655	ENSCPOG00000022689	RAB12	83	89.655	Cavia_porcellus
ENSGMOG00000012335	rab12	87	85.167	ENSCCAG00000022862	RAB12	85	85.167	Cebus_capucinus
ENSGMOG00000012335	rab12	79	88.830	ENSCATG00000037784	RAB12	78	88.770	Cercocebus_atys
ENSGMOG00000012335	rab12	87	83.491	ENSCSAG00000017569	RAB12	61	83.491	Chlorocebus_sabaeus
ENSGMOG00000012335	rab12	87	83.732	ENSCPBG00000028375	RAB12	85	83.732	Chrysemys_picta_bellii
ENSGMOG00000012335	rab12	77	89.071	ENSCANG00000031453	RAB12	83	89.071	Colobus_angolensis_palliatus
ENSGMOG00000012335	rab12	87	84.058	ENSCGRG00001006958	Rab12	71	84.058	Cricetulus_griseus_chok1gshd
ENSGMOG00000012335	rab12	87	90.431	ENSCSEG00000016933	rab12	86	91.866	Cynoglossus_semilaevis
ENSGMOG00000012335	rab12	87	88.679	ENSCVAG00000003539	rab12	86	89.623	Cyprinodon_variegatus
ENSGMOG00000012335	rab12	87	87.379	ENSDARG00000089428	rab12	86	86.893	Danio_rerio
ENSGMOG00000012335	rab12	79	87.766	ENSDORG00000008920	Rab12	82	87.701	Dipodomys_ordii
ENSGMOG00000012335	rab12	76	67.956	ENSEBUG00000006581	rab12	94	62.621	Eptatretus_burgeri
ENSGMOG00000012335	rab12	87	85.990	ENSEASG00005002926	RAB12	71	85.990	Equus_asinus_asinus
ENSGMOG00000012335	rab12	87	85.990	ENSECAG00000007384	RAB12	61	85.990	Equus_caballus
ENSGMOG00000012335	rab12	87	91.748	ENSELUG00000007123	rab12	86	91.748	Esox_lucius
ENSGMOG00000012335	rab12	87	85.577	ENSFCAG00000027710	RAB12	61	85.577	Felis_catus
ENSGMOG00000012335	rab12	87	87.678	ENSFHEG00000004319	rab12	86	89.573	Fundulus_heteroclitus
ENSGMOG00000012335	rab12	81	86.979	ENSGALG00000033608	RAB12	75	88.235	Gallus_gallus
ENSGMOG00000012335	rab12	99	84.232	ENSGACG00000016639	rab12	97	91.469	Gasterosteus_aculeatus
ENSGMOG00000012335	rab12	87	83.732	ENSGAGG00000007278	RAB12	85	83.732	Gopherus_agassizii
ENSGMOG00000012335	rab12	87	91.388	ENSHBUG00000008497	rab12	86	92.823	Haplochromis_burtoni
ENSGMOG00000012335	rab12	83	82.234	ENSHGLG00000006189	RAB12	72	86.486	Heterocephalus_glaber_female
ENSGMOG00000012335	rab12	87	88.517	ENSHCOG00000012376	rab12	86	88.038	Hippocampus_comes
ENSGMOG00000012335	rab12	79	91.979	ENSIPUG00000017401	rab12	76	91.935	Ictalurus_punctatus
ENSGMOG00000012335	rab12	84	83.417	ENSSTOG00000025122	RAB12	81	88.525	Ictidomys_tridecemlineatus
ENSGMOG00000012335	rab12	79	88.830	ENSJJAG00000019064	Rab12	82	88.770	Jaculus_jaculus
ENSGMOG00000012335	rab12	87	91.748	ENSKMAG00000020056	rab12	86	90.291	Kryptolebias_marmoratus
ENSGMOG00000012335	rab12	87	90.385	ENSLBEG00000013756	rab12	86	92.308	Labrus_bergylta
ENSGMOG00000012335	rab12	78	89.840	ENSLACG00000010461	RAB12	86	83.568	Latimeria_chalumnae
ENSGMOG00000012335	rab12	87	84.906	ENSLOCG00000002680	rab12	85	84.906	Lepisosteus_oculatus
ENSGMOG00000012335	rab12	87	84.286	ENSMFAG00000043551	RAB12	85	84.286	Macaca_fascicularis
ENSGMOG00000012335	rab12	79	88.830	ENSMNEG00000040853	RAB12	74	88.770	Macaca_nemestrina
ENSGMOG00000012335	rab12	87	89.423	ENSMAMG00000006862	rab12	86	91.346	Mastacembelus_armatus
ENSGMOG00000012335	rab12	87	91.388	ENSMZEG00005024316	rab12	86	92.823	Maylandia_zebra
ENSGMOG00000012335	rab12	71	89.286	ENSMGAG00000009197	RAB12	82	89.286	Meleagris_gallopavo
ENSGMOG00000012335	rab12	87	84.058	ENSMAUG00000008371	Rab12	70	84.058	Mesocricetus_auratus
ENSGMOG00000012335	rab12	79	88.298	ENSMICG00000030661	RAB12	85	85.644	Microcebus_murinus
ENSGMOG00000012335	rab12	77	88.525	ENSMOCG00000000452	Rab12	84	88.525	Microtus_ochrogaster
ENSGMOG00000012335	rab12	81	87.500	ENSMODG00000021452	RAB12	55	88.770	Monodelphis_domestica
ENSGMOG00000012335	rab12	87	88.942	ENSMALG00000015762	rab12	86	89.423	Monopterus_albus
ENSGMOG00000012335	rab12	87	83.575	MGP_CAROLIEiJ_G0021839	Rab12	71	83.575	Mus_caroli
ENSGMOG00000012335	rab12	87	83.575	ENSMUSG00000023460	Rab12	85	83.575	Mus_musculus
ENSGMOG00000012335	rab12	87	83.575	MGP_PahariEiJ_G0020826	Rab12	85	83.575	Mus_pahari
ENSGMOG00000012335	rab12	87	83.575	MGP_SPRETEiJ_G0022750	Rab12	71	83.575	Mus_spretus
ENSGMOG00000012335	rab12	87	85.990	ENSMLUG00000002883	RAB12	85	85.990	Myotis_lucifugus
ENSGMOG00000012335	rab12	83	85.279	ENSNGAG00000024103	-	80	88.770	Nannospalax_galili
ENSGMOG00000012335	rab12	87	73.913	ENSNGAG00000019722	-	84	73.913	Nannospalax_galili
ENSGMOG00000012335	rab12	87	91.388	ENSNBRG00000014428	rab12	86	92.823	Neolamprologus_brichardi
ENSGMOG00000012335	rab12	87	85.577	ENSNLEG00000006939	RAB12	85	85.577	Nomascus_leucogenys
ENSGMOG00000012335	rab12	87	83.810	ENSMEUG00000000493	RAB12	76	88.770	Notamacropus_eugenii
ENSGMOG00000012335	rab12	72	88.824	ENSODEG00000006414	RAB12	84	87.978	Octodon_degus
ENSGMOG00000012335	rab12	87	91.388	ENSONIG00000018469	rab12	86	92.823	Oreochromis_niloticus
ENSGMOG00000012335	rab12	87	90.909	ENSORLG00000003902	rab12	86	92.308	Oryzias_latipes
ENSGMOG00000012335	rab12	94	84.649	ENSORLG00020005131	rab12	97	86.404	Oryzias_latipes_hni
ENSGMOG00000012335	rab12	87	89.904	ENSORLG00015007869	rab12	86	91.827	Oryzias_latipes_hsok
ENSGMOG00000012335	rab12	87	90.385	ENSOMEG00000008191	rab12	86	92.308	Oryzias_melastigma
ENSGMOG00000012335	rab12	73	89.655	ENSOGAG00000028002	RAB12	82	89.655	Otolemur_garnettii
ENSGMOG00000012335	rab12	73	88.506	ENSOARG00000000728	RAB12	74	87.151	Ovis_aries
ENSGMOG00000012335	rab12	72	89.474	ENSPPAG00000009152	RAB12	80	90.000	Pan_paniscus
ENSGMOG00000012335	rab12	87	85.577	ENSPPRG00000024521	RAB12	85	85.577	Panthera_pardus
ENSGMOG00000012335	rab12	87	85.577	ENSPTRG00000009853	RAB12	85	85.577	Pan_troglodytes
ENSGMOG00000012335	rab12	87	83.412	ENSPANG00000009320	RAB12	85	83.412	Papio_anubis
ENSGMOG00000012335	rab12	87	86.893	ENSPKIG00000008579	rab12	86	86.893	Paramormyrops_kingsleyae
ENSGMOG00000012335	rab12	87	85.577	ENSPMGG00000001890	rab12	86	88.462	Periophthalmus_magnuspinnatus
ENSGMOG00000012335	rab12	87	83.575	ENSPEMG00000021032	Rab12	71	83.575	Peromyscus_maniculatus_bairdii
ENSGMOG00000012335	rab12	87	90.476	ENSPFOG00000001579	rab12	86	90.952	Poecilia_formosa
ENSGMOG00000012335	rab12	87	90.476	ENSPLAG00000013594	rab12	86	90.952	Poecilia_latipinna
ENSGMOG00000012335	rab12	87	90.476	ENSPMEG00000010417	rab12	86	90.952	Poecilia_mexicana
ENSGMOG00000012335	rab12	87	90.476	ENSPREG00000017487	rab12	86	90.952	Poecilia_reticulata
ENSGMOG00000012335	rab12	87	85.577	ENSPPYG00000009015	-	61	85.577	Pongo_abelii
ENSGMOG00000012335	rab12	87	84.615	ENSPCAG00000015007	RAB12	85	84.615	Procavia_capensis
ENSGMOG00000012335	rab12	87	85.577	ENSPCOG00000019816	RAB12	85	85.577	Propithecus_coquereli
ENSGMOG00000012335	rab12	87	86.058	ENSPVAG00000002757	RAB12	85	86.058	Pteropus_vampyrus
ENSGMOG00000012335	rab12	87	91.388	ENSPNYG00000005654	rab12	86	92.823	Pundamilia_nyererei
ENSGMOG00000012335	rab12	87	91.388	ENSPNYG00000023905	rab12	86	92.823	Pundamilia_nyererei
ENSGMOG00000012335	rab12	87	86.321	ENSPNAG00000015031	rab12	86	86.321	Pygocentrus_nattereri
ENSGMOG00000012335	rab12	86	82.126	ENSRNOG00000019295	Rab12	84	82.126	Rattus_norvegicus
ENSGMOG00000012335	rab12	79	88.830	ENSRBIG00000028760	RAB12	80	88.770	Rhinopithecus_bieti
ENSGMOG00000012335	rab12	79	88.830	ENSRROG00000019249	RAB12	78	88.770	Rhinopithecus_roxellana
ENSGMOG00000012335	rab12	82	82.051	ENSSBOG00000021125	RAB12	66	89.595	Saimiri_boliviensis_boliviensis
ENSGMOG00000012335	rab12	87	83.810	ENSSHAG00000001489	RAB12	83	88.770	Sarcophilus_harrisii
ENSGMOG00000012335	rab12	87	87.981	ENSSMAG00000012678	rab12	86	89.904	Scophthalmus_maximus
ENSGMOG00000012335	rab12	87	90.385	ENSSDUG00000008505	rab12	86	92.308	Seriola_dumerili
ENSGMOG00000012335	rab12	87	90.385	ENSSLDG00000022239	rab12	86	92.308	Seriola_lalandi_dorsalis
ENSGMOG00000012335	rab12	78	88.770	ENSSPUG00000003222	RAB12	76	88.770	Sphenodon_punctatus
ENSGMOG00000012335	rab12	87	90.909	ENSSPAG00000010822	rab12	86	92.344	Stegastes_partitus
ENSGMOG00000012335	rab12	87	85.096	ENSSSCG00000038026	RAB12	85	85.096	Sus_scrofa
ENSGMOG00000012335	rab12	81	87.500	ENSTGUG00000009889	RAB12	75	88.770	Taeniopygia_guttata
ENSGMOG00000012335	rab12	87	89.423	ENSTRUG00000024455	rab12	86	88.942	Takifugu_rubripes
ENSGMOG00000012335	rab12	87	89.423	ENSTNIG00000014859	rab12	86	89.423	Tetraodon_nigroviridis
ENSGMOG00000012335	rab12	77	87.978	ENSTTRG00000008711	RAB12	82	87.978	Tursiops_truncatus
ENSGMOG00000012335	rab12	87	85.577	ENSUAMG00000018092	RAB12	85	85.577	Ursus_americanus
ENSGMOG00000012335	rab12	78	88.108	ENSVVUG00000011748	RAB12	83	88.108	Vulpes_vulpes
ENSGMOG00000012335	rab12	87	83.491	ENSXETG00000004289	rab12	60	89.362	Xenopus_tropicalis
ENSGMOG00000012335	rab12	87	89.048	ENSXCOG00000019310	rab12	86	89.524	Xiphophorus_couchianus
ENSGMOG00000012335	rab12	87	89.048	ENSXMAG00000023617	rab12	86	89.524	Xiphophorus_maculatus