EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000012361 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 6808 bases
Position: chrGeneScaffold_4437:26630-33437
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013244	SRA1	PF07304.11	4.4e-58	1	1
ENSGMOP00000013254	SRA1	PF07304.11	3.9e-57	1	1
ENSGMOP00000013240	SRA1	PF07304.11	6e-56	1	1
ENSGMOP00000013236	SRA1	PF07304.11	2.2e-55	1	1
ENSGMOP00000013251	SRA1	PF07304.11	1.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013602	-	681	-	ENSGMOP00000013251	227 (aa)	-	UPI00023F27DE
ENSGMOT00000013595	-	561	-	ENSGMOP00000013244	187 (aa)	-	UPI00023F27DD
ENSGMOT00000013606	-	660	-	ENSGMOP00000013254	220 (aa)	-	UPI00023F27DF
ENSGMOT00000013591	-	597	-	ENSGMOP00000013240	199 (aa)	-	UPI00023F27DC
ENSGMOT00000013587	-	639	-	ENSGMOP00000013236	213 (aa)	-	UPI00023F27DB

Gene Model

Click here to download ENSGMOG00000012361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012361	-	98	52.970	ENSG00000213523	SRA1	88	53.211	Homo_sapiens
ENSGMOG00000012361	-	99	49.780	ENSAMEG00000011005	SRA1	86	53.081	Ailuropoda_melanoleuca
ENSGMOG00000012361	-	99	53.744	ENSACIG00000017574	-	87	55.046	Amphilophus_citrinellus
ENSGMOG00000012361	-	100	57.399	ENSAOCG00000019366	-	92	55.932	Amphiprion_ocellaris
ENSGMOG00000012361	-	100	57.399	ENSAPEG00000004211	-	92	55.932	Amphiprion_percula
ENSGMOG00000012361	-	100	56.951	ENSATEG00000013578	-	97	54.468	Anabas_testudineus
ENSGMOG00000012361	-	96	46.083	ENSACAG00000013148	SRA1	92	46.330	Anolis_carolinensis
ENSGMOG00000012361	-	98	51.980	ENSANAG00000020391	SRA1	88	52.294	Aotus_nancymaae
ENSGMOG00000012361	-	99	53.540	ENSACLG00000002061	-	75	57.547	Astatotilapia_calliptera
ENSGMOG00000012361	-	98	50.000	ENSAMXG00000032750	sra1	86	52.683	Astyanax_mexicanus
ENSGMOG00000012361	-	95	52.217	ENSBTAG00000001449	SRA1	89	53.922	Bos_taurus
ENSGMOG00000012361	-	98	52.239	ENSCJAG00000016613	SRA1	86	54.187	Callithrix_jacchus
ENSGMOG00000012361	-	95	54.327	ENSCAFG00000005819	SRA1	86	54.327	Canis_familiaris
ENSGMOG00000012361	-	95	54.327	ENSCAFG00020001924	SRA1	86	54.327	Canis_lupus_dingo
ENSGMOG00000012361	-	93	48.131	ENSCHIG00000013652	SRA1	73	53.266	Capra_hircus
ENSGMOG00000012361	-	98	51.961	ENSTSYG00000032938	SRA1	86	51.961	Carlito_syrichta
ENSGMOG00000012361	-	66	53.659	ENSCAPG00000013096	SRA1	85	50.685	Cavia_aperea
ENSGMOG00000012361	-	98	51.905	ENSCPOG00000020210	SRA1	88	51.905	Cavia_porcellus
ENSGMOG00000012361	-	98	50.746	ENSCCAG00000029225	SRA1	88	51.584	Cebus_capucinus
ENSGMOG00000012361	-	98	52.475	ENSCATG00000044295	SRA1	89	52.752	Cercocebus_atys
ENSGMOG00000012361	-	94	50.515	ENSCLAG00000003359	SRA1	86	54.229	Chinchilla_lanigera
ENSGMOG00000012361	-	98	52.475	ENSCSAG00000012824	SRA1	89	52.752	Chlorocebus_sabaeus
ENSGMOG00000012361	-	99	44.248	ENSCPBG00000007590	SRA1	90	47.805	Chrysemys_picta_bellii
ENSGMOG00000012361	-	91	32.367	ENSCING00000014906	-	96	33.702	Ciona_intestinalis
ENSGMOG00000012361	-	98	52.475	ENSCANG00000036375	SRA1	89	52.294	Colobus_angolensis_palliatus
ENSGMOG00000012361	-	99	52.336	ENSCGRG00001005557	-	85	52.336	Cricetulus_griseus_chok1gshd
ENSGMOG00000012361	-	99	52.336	ENSCGRG00000007079	-	90	52.336	Cricetulus_griseus_crigri
ENSGMOG00000012361	-	100	54.113	ENSCSEG00000020723	-	97	56.923	Cynoglossus_semilaevis
ENSGMOG00000012361	-	100	54.348	ENSCVAG00000019294	-	90	53.571	Cyprinodon_variegatus
ENSGMOG00000012361	-	99	48.918	ENSDARG00000053619	sra1	95	50.971	Danio_rerio
ENSGMOG00000012361	-	98	53.202	ENSDNOG00000045277	SRA1	82	53.659	Dasypus_novemcinctus
ENSGMOG00000012361	-	64	53.333	ENSDORG00000026790	-	85	50.649	Dipodomys_ordii
ENSGMOG00000012361	-	92	37.705	ENSEBUG00000006644	sra1	96	37.500	Eptatretus_burgeri
ENSGMOG00000012361	-	97	50.476	ENSEASG00005017485	SRA1	85	51.835	Equus_asinus_asinus
ENSGMOG00000012361	-	97	47.059	ENSECAG00000014366	SRA1	84	51.923	Equus_caballus
ENSGMOG00000012361	-	99	51.101	ENSELUG00000004809	sra1	95	49.372	Esox_lucius
ENSGMOG00000012361	-	98	53.171	ENSFCAG00000035180	SRA1	86	53.171	Felis_catus
ENSGMOG00000012361	-	93	54.450	ENSFALG00000009306	SRA1	81	55.729	Ficedula_albicollis
ENSGMOG00000012361	-	97	52.261	ENSFDAG00000001810	SRA1	88	52.336	Fukomys_damarensis
ENSGMOG00000012361	-	99	54.185	ENSFHEG00000003267	-	81	55.556	Fundulus_heteroclitus
ENSGMOG00000012361	-	95	49.485	ENSGALG00000040453	SRA1	88	51.546	Gallus_gallus
ENSGMOG00000012361	-	96	57.009	ENSGAFG00000022037	-	62	56.398	Gambusia_affinis
ENSGMOG00000012361	-	99	54.455	ENSGACG00000020904	-	88	55.122	Gasterosteus_aculeatus
ENSGMOG00000012361	-	99	46.460	ENSGAGG00000000284	SRA1	90	49.268	Gopherus_agassizii
ENSGMOG00000012361	-	98	52.970	ENSGGOG00000042935	SRA1	88	53.211	Gorilla_gorilla
ENSGMOG00000012361	-	79	54.730	ENSHBUG00000010633	-	84	55.333	Haplochromis_burtoni
ENSGMOG00000012361	-	99	51.643	ENSHGLG00000010259	SRA1	89	51.643	Heterocephalus_glaber_female
ENSGMOG00000012361	-	99	51.643	ENSHGLG00100006596	SRA1	89	51.643	Heterocephalus_glaber_male
ENSGMOG00000012361	-	99	50.685	ENSHCOG00000013146	-	91	56.098	Hippocampus_comes
ENSGMOG00000012361	-	99	47.679	ENSIPUG00000020481	sra1	93	51.163	Ictalurus_punctatus
ENSGMOG00000012361	-	96	51.515	ENSSTOG00000024229	SRA1	88	51.923	Ictidomys_tridecemlineatus
ENSGMOG00000012361	-	96	51.500	ENSJJAG00000014326	-	86	51.724	Jaculus_jaculus
ENSGMOG00000012361	-	98	57.466	ENSLBEG00000002280	-	89	57.692	Labrus_bergylta
ENSGMOG00000012361	-	96	46.637	ENSLACG00000007697	SRA1	91	44.545	Latimeria_chalumnae
ENSGMOG00000012361	-	99	47.368	ENSLOCG00000011051	SRA1	89	52.404	Lepisosteus_oculatus
ENSGMOG00000012361	-	99	52.727	ENSLAFG00000020802	SRA1	88	54.587	Loxodonta_africana
ENSGMOG00000012361	-	98	52.475	ENSMFAG00000007347	SRA1	89	52.752	Macaca_fascicularis
ENSGMOG00000012361	-	98	52.475	ENSMMUG00000001706	SRA1	89	52.752	Macaca_mulatta
ENSGMOG00000012361	-	98	52.475	ENSMNEG00000029401	SRA1	89	52.752	Macaca_nemestrina
ENSGMOG00000012361	-	98	51.980	ENSMLEG00000036807	SRA1	89	52.294	Mandrillus_leucophaeus
ENSGMOG00000012361	-	100	51.316	ENSMAMG00000012359	-	82	54.018	Mastacembelus_armatus
ENSGMOG00000012361	-	99	53.540	ENSMZEG00005024979	-	75	54.884	Maylandia_zebra
ENSGMOG00000012361	-	99	53.540	ENSMZEG00005025134	-	75	54.884	Maylandia_zebra
ENSGMOG00000012361	-	99	52.358	ENSMAUG00000012789	-	88	52.358	Mesocricetus_auratus
ENSGMOG00000012361	-	98	52.709	ENSMICG00000044059	SRA1	86	52.709	Microcebus_murinus
ENSGMOG00000012361	-	99	47.887	ENSMOCG00000008156	-	89	50.463	Microtus_ochrogaster
ENSGMOG00000012361	-	99	48.178	ENSMMOG00000017400	-	91	50.230	Mola_mola
ENSGMOG00000012361	-	100	53.680	ENSMALG00000003857	-	90	54.741	Monopterus_albus
ENSGMOG00000012361	-	99	52.113	ENSMUSG00000006050	Sra1	89	52.970	Mus_musculus
ENSGMOG00000012361	-	98	50.739	ENSMPUG00000008493	SRA1	86	54.412	Mustela_putorius_furo
ENSGMOG00000012361	-	94	46.512	ENSMLUG00000022959	SRA1	86	52.062	Myotis_lucifugus
ENSGMOG00000012361	-	96	48.241	ENSNGAG00000017765	-	90	51.471	Nannospalax_galili
ENSGMOG00000012361	-	98	52.970	ENSNLEG00000034424	SRA1	88	53.211	Nomascus_leucogenys
ENSGMOG00000012361	-	96	50.495	ENSMEUG00000013640	SRA1	86	50.495	Notamacropus_eugenii
ENSGMOG00000012361	-	99	48.357	ENSOPRG00000018381	SRA1	89	50.000	Ochotona_princeps
ENSGMOG00000012361	-	94	52.041	ENSODEG00000003997	SRA1	87	50.220	Octodon_degus
ENSGMOG00000012361	-	99	48.810	ENSONIG00000017849	-	91	52.381	Oreochromis_niloticus
ENSGMOG00000012361	-	99	50.467	ENSOCUG00000021569	SRA1	90	51.584	Oryctolagus_cuniculus
ENSGMOG00000012361	-	99	51.064	ENSORLG00000022839	sra1	90	52.703	Oryzias_latipes
ENSGMOG00000012361	-	99	51.915	ENSORLG00020013412	-	90	51.802	Oryzias_latipes_hni
ENSGMOG00000012361	-	99	52.586	ENSOMEG00000009187	-	90	51.802	Oryzias_melastigma
ENSGMOG00000012361	-	96	51.759	ENSOGAG00000025549	SRA1	89	52.074	Otolemur_garnettii
ENSGMOG00000012361	-	100	50.476	ENSOARG00000018101	SRA1	89	53.636	Ovis_aries
ENSGMOG00000012361	-	98	52.970	ENSPPAG00000032469	SRA1	88	53.211	Pan_paniscus
ENSGMOG00000012361	-	98	53.171	ENSPPRG00000023984	SRA1	86	53.171	Panthera_pardus
ENSGMOG00000012361	-	98	53.171	ENSPTIG00000011361	SRA1	86	53.171	Panthera_tigris_altaica
ENSGMOG00000012361	-	98	52.970	ENSPTRG00000017314	SRA1	88	53.211	Pan_troglodytes
ENSGMOG00000012361	-	98	51.980	ENSPANG00000008615	SRA1	89	52.489	Papio_anubis
ENSGMOG00000012361	-	99	47.598	ENSPKIG00000019491	sra1	90	50.990	Paramormyrops_kingsleyae
ENSGMOG00000012361	-	83	54.487	ENSPMGG00000018172	-	82	50.276	Periophthalmus_magnuspinnatus
ENSGMOG00000012361	-	98	51.485	ENSPEMG00000000489	-	83	50.467	Peromyscus_maniculatus_bairdii
ENSGMOG00000012361	-	96	35.065	ENSPMAG00000008631	sra1	89	38.356	Petromyzon_marinus
ENSGMOG00000012361	-	95	51.020	ENSPCIG00000017474	SRA1	79	51.020	Phascolarctos_cinereus
ENSGMOG00000012361	-	99	52.212	ENSPFOG00000019038	-	81	56.098	Poecilia_formosa
ENSGMOG00000012361	-	99	52.212	ENSPLAG00000002438	-	81	56.872	Poecilia_latipinna
ENSGMOG00000012361	-	99	52.655	ENSPMEG00000000520	-	81	56.585	Poecilia_mexicana
ENSGMOG00000012361	-	100	49.407	ENSPREG00000003284	-	90	46.718	Poecilia_reticulata
ENSGMOG00000012361	-	98	53.465	ENSPPYG00000015855	SRA1	88	52.294	Pongo_abelii
ENSGMOG00000012361	-	79	40.659	ENSPCAG00000016361	SRA1	96	45.679	Procavia_capensis
ENSGMOG00000012361	-	98	52.709	ENSPCOG00000010221	SRA1	86	52.709	Propithecus_coquereli
ENSGMOG00000012361	-	99	51.376	ENSPVAG00000009698	SRA1	89	51.376	Pteropus_vampyrus
ENSGMOG00000012361	-	99	53.097	ENSPNYG00000022136	-	75	57.075	Pundamilia_nyererei
ENSGMOG00000012361	-	99	48.458	ENSPNAG00000020396	sra1	76	50.926	Pygocentrus_nattereri
ENSGMOG00000012361	-	100	53.241	ENSRNOG00000018089	Sra1	90	53.241	Rattus_norvegicus
ENSGMOG00000012361	-	98	52.970	ENSRBIG00000035226	SRA1	89	52.752	Rhinopithecus_bieti
ENSGMOG00000012361	-	98	52.970	ENSRROG00000011630	SRA1	89	52.752	Rhinopithecus_roxellana
ENSGMOG00000012361	-	98	49.754	ENSSBOG00000011756	SRA1	85	54.000	Saimiri_boliviensis_boliviensis
ENSGMOG00000012361	-	95	48.485	ENSSHAG00000016297	SRA1	84	50.510	Sarcophilus_harrisii
ENSGMOG00000012361	-	99	49.123	ENSSFOG00015022155	sra1	90	52.683	Scleropages_formosus
ENSGMOG00000012361	-	100	57.642	ENSSMAG00000016237	-	86	53.814	Scophthalmus_maximus
ENSGMOG00000012361	-	100	53.846	ENSSDUG00000023303	-	95	51.653	Seriola_dumerili
ENSGMOG00000012361	-	96	55.495	ENSSLDG00000007472	SRA1	75	76.829	Seriola_lalandi_dorsalis
ENSGMOG00000012361	-	96	48.276	ENSSPUG00000015651	SRA1	91	50.000	Sphenodon_punctatus
ENSGMOG00000012361	-	100	56.637	ENSSPAG00000011180	-	92	56.087	Stegastes_partitus
ENSGMOG00000012361	-	100	51.818	ENSSSCG00000014365	SRA1	75	51.818	Sus_scrofa
ENSGMOG00000012361	-	51	53.125	ENSTGUG00000001675	SRA1	77	49.606	Taeniopygia_guttata
ENSGMOG00000012361	-	99	53.712	ENSTRUG00000007664	-	90	54.717	Takifugu_rubripes
ENSGMOG00000012361	-	98	54.106	ENSTNIG00000007605	-	83	55.556	Tetraodon_nigroviridis
ENSGMOG00000012361	-	99	52.074	ENSTTRG00000005574	SRA1	89	52.074	Tursiops_truncatus
ENSGMOG00000012361	-	96	52.500	ENSUAMG00000005355	SRA1	89	53.883	Ursus_americanus
ENSGMOG00000012361	-	91	52.083	ENSUMAG00000013276	SRA1	82	48.230	Ursus_maritimus
ENSGMOG00000012361	-	60	57.522	ENSVPAG00000002455	SRA1	85	52.778	Vicugna_pacos
ENSGMOG00000012361	-	95	54.327	ENSVVUG00000012374	SRA1	86	54.327	Vulpes_vulpes
ENSGMOG00000012361	-	95	48.276	ENSXETG00000032326	sra1	89	48.768	Xenopus_tropicalis
ENSGMOG00000012361	-	100	57.269	ENSXMAG00000006613	-	92	53.390	Xiphophorus_maculatus