EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000012419 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2710 bases
Position: chrGeneScaffold_3480:97428-100137
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013295	Gar1	PF04410.14	2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000013649	-	678	-	ENSGMOP00000013295	226 (aa)	-	UPI00023F28F1

Gene Model

Click here to download ENSGMOG00000012419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012419	gar1	62	63.830	ENSCHIG00000011049	-	54	75.701	Capra_hircus
ENSGMOG00000012419	gar1	67	77.483	ENSCLAG00000005335	GAR1	69	90.909	Chinchilla_lanigera
ENSGMOG00000012419	gar1	79	83.051	ENSCPBG00000004310	GAR1	85	83.051	Chrysemys_picta_bellii
ENSGMOG00000012419	gar1	58	81.679	ENSCVAG00000002103	gar1	52	91.667	Cyprinodon_variegatus
ENSGMOG00000012419	gar1	99	49.091	ENSFCAG00000025841	-	50	58.879	Felis_catus
ENSGMOG00000012419	gar1	58	80.153	ENSFHEG00000008068	gar1	50	91.667	Fundulus_heteroclitus
ENSGMOG00000012419	gar1	58	81.679	ENSGAFG00000016833	gar1	63	78.523	Gambusia_affinis
ENSGMOG00000012419	gar1	73	78.049	ENSGAGG00000004393	GAR1	84	82.203	Gopherus_agassizii
ENSGMOG00000012419	gar1	52	71.186	ENSGGOG00000036205	-	53	71.963	Gorilla_gorilla
ENSGMOG00000012419	gar1	73	74.699	ENSKMAG00000010402	gar1	51	92.593	Kryptolebias_marmoratus
ENSGMOG00000012419	gar1	83	83.721	ENSMMOG00000004156	gar1	53	91.667	Mola_mola
ENSGMOG00000012419	gar1	61	73.148	ENSPTRG00000049340	-	51	72.897	Pan_troglodytes
ENSGMOG00000012419	gar1	58	80.916	ENSPFOG00000024155	gar1	51	90.741	Poecilia_formosa
ENSGMOG00000012419	gar1	58	80.916	ENSPLAG00000015056	gar1	51	90.741	Poecilia_latipinna
ENSGMOG00000012419	gar1	58	81.679	ENSPMEG00000009320	gar1	52	91.667	Poecilia_mexicana
ENSGMOG00000012419	gar1	58	83.077	ENSSMAG00000009976	gar1	50	93.519	Scophthalmus_maximus
ENSGMOG00000012419	gar1	76	82.540	ENSSPUG00000008707	GAR1	59	89.623	Sphenodon_punctatus
ENSGMOG00000012419	gar1	73	75.301	ENSTRUG00000020580	gar1	52	90.741	Takifugu_rubripes
ENSGMOG00000012419	gar1	63	83.916	ENSTNIG00000013023	gar1	61	93.519	Tetraodon_nigroviridis
ENSGMOG00000012419	gar1	67	76.159	ENSVVUG00000017612	GAR1	65	79.577	Vulpes_vulpes