EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGMOG00000012731 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
15558 bases
Position
chrGeneScaffold_1031:138763-154320
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000013622CSDPF00313.227.8e-8315
ENSGMOP00000013622CSDPF00313.227.8e-8325
ENSGMOP00000013622CSDPF00313.227.8e-8335
ENSGMOP00000013622CSDPF00313.227.8e-8345
ENSGMOP00000013622CSDPF00313.227.8e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000013981-2391-ENSGMOP00000013622797 (aa)-UPI00023F295E
Gene Model
Click here to download ENSGMOG00000012731's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012731's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000012731csde110076.846ENSG00000009307CSDE110082.979Homo_sapiens
ENSGMOG00000012731csde110088.494ENSAPOG00000015538csde19988.063Acanthochromis_polyacanthus
ENSGMOG00000012731csde110073.651ENSAMEG00000017129CSDE19473.651Ailuropoda_melanoleuca
ENSGMOG00000012731csde19187.601ENSACIG00000015175csde110087.601Amphilophus_citrinellus
ENSGMOG00000012731csde110088.372ENSAOCG00000011510csde19987.343Amphiprion_ocellaris
ENSGMOG00000012731csde110090.476ENSAPEG00000007194csde19988.372Amphiprion_percula
ENSGMOG00000012731csde110086.216ENSATEG00000003864csde19986.216Anabas_testudineus
ENSGMOG00000012731csde110075.533ENSAPLG00000008797CSDE19975.533Anas_platyrhynchos
ENSGMOG00000012731csde110078.348ENSACAG00000003120CSDE19978.348Anolis_carolinensis
ENSGMOG00000012731csde110076.596ENSANAG00000024665CSDE19477.586Aotus_nancymaae
ENSGMOG00000012731csde17962.245ENSANAG00000028396-9162.245Aotus_nancymaae
ENSGMOG00000012731csde110088.471ENSACLG00000013296csde19988.471Astatotilapia_calliptera
ENSGMOG00000012731csde110083.229ENSAMXG00000007436csde19983.229Astyanax_mexicanus
ENSGMOG00000012731csde110076.596ENSBTAG00000000678CSDE19974.028Bos_taurus
ENSGMOG00000012731csde110076.721ENSCJAG00000012565CSDE19476.721Callithrix_jacchus
ENSGMOG00000012731csde19874.680ENSCAFG00000009618CSDE19474.680Canis_familiaris
ENSGMOG00000012731csde110074.529ENSCAFG00020000481CSDE19974.529Canis_lupus_dingo
ENSGMOG00000012731csde110076.596ENSCHIG00000017250CSDE19974.028Capra_hircus
ENSGMOG00000012731csde110076.596ENSTSYG00000003747CSDE19976.596Carlito_syrichta
ENSGMOG00000012731csde110075.460ENSCAPG00000015128CSDE19975.460Cavia_aperea
ENSGMOG00000012731csde110073.024ENSCPOG00000040388CSDE19973.024Cavia_porcellus
ENSGMOG00000012731csde110076.721ENSCCAG00000036794CSDE19976.721Cebus_capucinus
ENSGMOG00000012731csde19556.974ENSCCAG00000033677-9956.974Cebus_capucinus
ENSGMOG00000012731csde19855.134ENSCCAG00000030878-9055.134Cebus_capucinus
ENSGMOG00000012731csde110076.846ENSCATG00000036962CSDE19774.279Cercocebus_atys
ENSGMOG00000012731csde110077.096ENSCLAG00000006618CSDE19977.096Chinchilla_lanigera
ENSGMOG00000012731csde110076.846ENSCSAG00000001658CSDE19476.846Chlorocebus_sabaeus
ENSGMOG00000012731csde110081.553ENSCHOG00000000918CSDE17781.553Choloepus_hoffmanni
ENSGMOG00000012731csde110078.723ENSCPBG00000016547CSDE19978.723Chrysemys_picta_bellii
ENSGMOG00000012731csde19942.563ENSCING00000014465-9642.563Ciona_intestinalis
ENSGMOG00000012731csde19742.649ENSCSAVG00000008100-9942.649Ciona_savignyi
ENSGMOG00000012731csde19079.623ENSCANG00000031069-9379.623Colobus_angolensis_palliatus
ENSGMOG00000012731csde110076.846ENSCANG00000035096CSDE19774.279Colobus_angolensis_palliatus
ENSGMOG00000012731csde110060.728ENSCGRG00001014011-9960.728Cricetulus_griseus_chok1gshd
ENSGMOG00000012731csde110076.471ENSCGRG00001016833-9976.471Cricetulus_griseus_chok1gshd
ENSGMOG00000012731csde19773.274ENSCGRG00000002225-9973.274Cricetulus_griseus_crigri
ENSGMOG00000012731csde110064.865ENSCGRG00000005831-9964.865Cricetulus_griseus_crigri
ENSGMOG00000012731csde110085.018ENSCSEG00000002620csde19984.461Cynoglossus_semilaevis
ENSGMOG00000012731csde110087.594ENSCVAG00000001344csde19987.157Cyprinodon_variegatus
ENSGMOG00000012731csde110086.341ENSDARG00000074758csde19986.341Danio_rerio
ENSGMOG00000012731csde110074.436ENSDNOG00000010287-9374.436Dasypus_novemcinctus
ENSGMOG00000012731csde110076.345ENSDORG00000011609Csde19976.345Dipodomys_ordii
ENSGMOG00000012731csde19749.592FBgn0263352Unr8648.509Drosophila_melanogaster
ENSGMOG00000012731csde17554.181ENSETEG00000007109-9954.181Echinops_telfairi
ENSGMOG00000012731csde19166.114ENSETEG00000006280-10066.114Echinops_telfairi
ENSGMOG00000012731csde19383.193ENSETEG00000002491-7483.193Echinops_telfairi
ENSGMOG00000012731csde19958.417ENSETEG00000013678-9958.417Echinops_telfairi
ENSGMOG00000012731csde19955.419ENSEBUG00000008647csde19953.699Eptatretus_burgeri
ENSGMOG00000012731csde110077.222ENSEASG00005006284CSDE19977.222Equus_asinus_asinus
ENSGMOG00000012731csde110077.222ENSECAG00000020885CSDE19977.222Equus_caballus
ENSGMOG00000012731csde19374.346ENSEEUG00000006286CSDE16774.346Erinaceus_europaeus
ENSGMOG00000012731csde110086.788ENSELUG00000015507csde19984.270Esox_lucius
ENSGMOG00000012731csde110077.096ENSFCAG00000029266CSDE19974.529Felis_catus
ENSGMOG00000012731csde110077.847ENSFALG00000003407CSDE19977.847Ficedula_albicollis
ENSGMOG00000012731csde110076.596ENSFDAG00000007882CSDE19976.596Fukomys_damarensis
ENSGMOG00000012731csde110087.845ENSFHEG00000010799csde19987.845Fundulus_heteroclitus
ENSGMOG00000012731csde19878.217ENSGALG00000002139CSDE19878.217Gallus_gallus
ENSGMOG00000012731csde19583.212ENSGAFG00000005241csde19583.212Gambusia_affinis
ENSGMOG00000012731csde110089.098ENSGACG00000004544csde110089.098Gasterosteus_aculeatus
ENSGMOG00000012731csde110078.849ENSGAGG00000017685CSDE19978.849Gopherus_agassizii
ENSGMOG00000012731csde110076.846ENSGGOG00000002164CSDE19974.279Gorilla_gorilla
ENSGMOG00000012731csde110087.656ENSHBUG00000020315csde19985.369Haplochromis_burtoni
ENSGMOG00000012731csde110062.578ENSHGLG00000000650-9962.578Heterocephalus_glaber_female
ENSGMOG00000012731csde110064.492ENSHGLG00000019549-9964.492Heterocephalus_glaber_female
ENSGMOG00000012731csde19967.820ENSHGLG00000008555-9967.820Heterocephalus_glaber_female
ENSGMOG00000012731csde19666.071ENSHGLG00000010039-9966.071Heterocephalus_glaber_female
ENSGMOG00000012731csde110067.127ENSHGLG00000003829-9967.127Heterocephalus_glaber_female
ENSGMOG00000012731csde19965.909ENSHGLG00000007471-9865.909Heterocephalus_glaber_female
ENSGMOG00000012731csde110070.088ENSHGLG00000009620-9970.213Heterocephalus_glaber_female
ENSGMOG00000012731csde19760.802ENSHGLG00100004833-9960.802Heterocephalus_glaber_male
ENSGMOG00000012731csde110076.721ENSHGLG00100019438-9976.721Heterocephalus_glaber_male
ENSGMOG00000012731csde110060.979ENSHGLG00100001846-9961.244Heterocephalus_glaber_male
ENSGMOG00000012731csde19964.817ENSHGLG00100007287-9864.817Heterocephalus_glaber_male
ENSGMOG00000012731csde110063.112ENSHGLG00100012072-9864.869Heterocephalus_glaber_male
ENSGMOG00000012731csde19462.350ENSHGLG00100004195-10062.350Heterocephalus_glaber_male
ENSGMOG00000012731csde110065.668ENSHGLG00100002245-9965.668Heterocephalus_glaber_male
ENSGMOG00000012731csde19666.071ENSHGLG00100006910-9966.071Heterocephalus_glaber_male
ENSGMOG00000012731csde110088.095ENSHCOG00000004158csde19985.088Hippocampus_comes
ENSGMOG00000012731csde110081.852ENSIPUG00000000355csde19981.852Ictalurus_punctatus
ENSGMOG00000012731csde19365.243ENSSTOG00000032722-9865.243Ictidomys_tridecemlineatus
ENSGMOG00000012731csde110062.857ENSSTOG00000030994-9962.857Ictidomys_tridecemlineatus
ENSGMOG00000012731csde110076.471ENSJJAG00000019571Csde19976.471Jaculus_jaculus
ENSGMOG00000012731csde110087.781ENSKMAG00000005685csde19987.345Kryptolebias_marmoratus
ENSGMOG00000012731csde110087.271ENSLBEG00000014770csde19986.216Labrus_bergylta
ENSGMOG00000012731csde110074.907ENSLACG00000018452CSDE19474.907Latimeria_chalumnae
ENSGMOG00000012731csde110086.341ENSLOCG00000010413csde19486.341Lepisosteus_oculatus
ENSGMOG00000012731csde110073.902ENSLAFG00000007150CSDE19673.902Loxodonta_africana
ENSGMOG00000012731csde110076.846ENSMFAG00000003674CSDE19974.279Macaca_fascicularis
ENSGMOG00000012731csde110076.846ENSMMUG00000001974CSDE19974.279Macaca_mulatta
ENSGMOG00000012731csde110076.846ENSMNEG00000045247CSDE19774.279Macaca_nemestrina
ENSGMOG00000012731csde110076.596ENSMLEG00000038673CSDE19476.596Mandrillus_leucophaeus
ENSGMOG00000012731csde110088.127ENSMAMG00000008821csde19986.967Mastacembelus_armatus
ENSGMOG00000012731csde110088.471ENSMZEG00005021675csde19985.338Maylandia_zebra
ENSGMOG00000012731csde19878.217ENSMGAG00000016381CSDE19878.217Meleagris_gallopavo
ENSGMOG00000012731csde110076.471ENSMAUG00000014031Csde19976.471Mesocricetus_auratus
ENSGMOG00000012731csde110076.971ENSMICG00000002050CSDE19974.610Microcebus_murinus
ENSGMOG00000012731csde110076.471ENSMOCG00000018960Csde19976.471Microtus_ochrogaster
ENSGMOG00000012731csde110086.967ENSMMOG00000015075csde19986.967Mola_mola
ENSGMOG00000012731csde110077.972ENSMODG00000004685CSDE19977.972Monodelphis_domestica
ENSGMOG00000012731csde110086.717ENSMALG00000007132csde19986.717Monopterus_albus
ENSGMOG00000012731csde110076.596MGP_CAROLIEiJ_G0025444Csde19291.176Mus_caroli
ENSGMOG00000012731csde110076.596ENSMUSG00000068823Csde19891.176Mus_musculus
ENSGMOG00000012731csde110076.596MGP_PahariEiJ_G0026888Csde19291.176Mus_pahari
ENSGMOG00000012731csde110076.596MGP_SPRETEiJ_G0026394Csde19991.176Mus_spretus
ENSGMOG00000012731csde19877.296ENSMPUG00000005753CSDE19977.296Mustela_putorius_furo
ENSGMOG00000012731csde110073.902ENSMLUG00000005681CSDE19473.902Myotis_lucifugus
ENSGMOG00000012731csde19652.809ENSNGAG00000012599-9852.809Nannospalax_galili
ENSGMOG00000012731csde110076.471ENSNGAG00000021929Csde19976.471Nannospalax_galili
ENSGMOG00000012731csde110085.338ENSNBRG00000020808csde19985.338Neolamprologus_brichardi
ENSGMOG00000012731csde110076.721ENSNLEG00000004842CSDE19774.153Nomascus_leucogenys
ENSGMOG00000012731csde19883.495ENSMEUG00000002677CSDE19583.495Notamacropus_eugenii
ENSGMOG00000012731csde19881.553ENSOPRG00000005002CSDE17681.553Ochotona_princeps
ENSGMOG00000012731csde110076.345ENSODEG00000007383-9976.345Octodon_degus
ENSGMOG00000012731csde19651.885ENSODEG00000005979-9751.885Octodon_degus
ENSGMOG00000012731csde110086.291ENSONIG00000009309csde19986.291Oreochromis_niloticus
ENSGMOG00000012731csde110078.716ENSOANG00000003346-8278.716Ornithorhynchus_anatinus
ENSGMOG00000012731csde110076.095ENSOCUG00000016438CSDE19476.095Oryctolagus_cuniculus
ENSGMOG00000012731csde110084.700ENSORLG00000000707csde19984.700Oryzias_latipes
ENSGMOG00000012731csde110086.717ENSORLG00020005148csde19984.700Oryzias_latipes_hni
ENSGMOG00000012731csde110086.591ENSORLG00015019415csde19984.578Oryzias_latipes_hsok
ENSGMOG00000012731csde110086.717ENSOMEG00000015656csde19984.700Oryzias_melastigma
ENSGMOG00000012731csde110074.529ENSOGAG00000012127CSDE19474.529Otolemur_garnettii
ENSGMOG00000012731csde110074.028ENSOARG00000020034CSDE19474.028Ovis_aries
ENSGMOG00000012731csde110076.846ENSPPAG00000025861CSDE19974.279Pan_paniscus
ENSGMOG00000012731csde110077.096ENSPPRG00000006747CSDE19477.096Panthera_pardus
ENSGMOG00000012731csde110077.096ENSPTIG00000015468CSDE19977.096Panthera_tigris_altaica
ENSGMOG00000012731csde110076.846ENSPTRG00000033721CSDE19976.846Pan_troglodytes
ENSGMOG00000012731csde110076.846ENSPANG00000018873CSDE19974.279Papio_anubis
ENSGMOG00000012731csde110082.456ENSPKIG00000009459csde19982.456Paramormyrops_kingsleyae
ENSGMOG00000012731csde19680.795ENSPSIG00000003823CSDE19680.795Pelodiscus_sinensis
ENSGMOG00000012731csde110082.979ENSPMGG00000000772csde19982.979Periophthalmus_magnuspinnatus
ENSGMOG00000012731csde110076.721ENSPEMG00000020357-9976.721Peromyscus_maniculatus_bairdii
ENSGMOG00000012731csde110077.847ENSPCIG00000022587CSDE19977.847Phascolarctos_cinereus
ENSGMOG00000012731csde19786.159ENSPFOG00000012664csde19986.625Poecilia_formosa
ENSGMOG00000012731csde19581.288ENSPLAG00000017680csde19381.288Poecilia_latipinna
ENSGMOG00000012731csde19581.288ENSPMEG00000005094csde19581.288Poecilia_mexicana
ENSGMOG00000012731csde110086.658ENSPREG00000011631csde19984.096Poecilia_reticulata
ENSGMOG00000012731csde110076.721ENSPPYG00000000996CSDE19976.721Pongo_abelii
ENSGMOG00000012731csde110082.524ENSPCAG00000014368CSDE19082.524Procavia_capensis
ENSGMOG00000012731csde110076.971ENSPCOG00000017893CSDE19976.971Propithecus_coquereli
ENSGMOG00000012731csde19069.118ENSPCOG00000008223-9169.118Propithecus_coquereli
ENSGMOG00000012731csde110069.511ENSPVAG00000008225CSDE19469.511Pteropus_vampyrus
ENSGMOG00000012731csde110087.656ENSPNYG00000013745csde19985.369Pundamilia_nyererei
ENSGMOG00000012731csde110086.984ENSPNAG00000001958csde19983.730Pygocentrus_nattereri
ENSGMOG00000012731csde110076.471ENSRNOG00000061058Csde19976.471Rattus_norvegicus
ENSGMOG00000012731csde110072.215ENSRBIG00000038966-9472.215Rhinopithecus_bieti
ENSGMOG00000012731csde110073.717ENSRBIG00000038088-9973.440Rhinopithecus_bieti
ENSGMOG00000012731csde110076.846ENSRROG00000043101CSDE19774.279Rhinopithecus_roxellana
ENSGMOG00000012731csde110076.721ENSSBOG00000035592CSDE19476.721Saimiri_boliviensis_boliviensis
ENSGMOG00000012731csde110075.282ENSSHAG00000009831CSDE19975.282Sarcophilus_harrisii
ENSGMOG00000012731csde110083.416ENSSFOG00015007498csde19983.666Scleropages_formosus
ENSGMOG00000012731csde110087.760ENSSMAG00000007203csde19987.760Scophthalmus_maximus
ENSGMOG00000012731csde110088.250ENSSDUG00000015380csde19987.218Seriola_dumerili
ENSGMOG00000012731csde110090.351ENSSLDG00000008819csde19990.351Seriola_lalandi_dorsalis
ENSGMOG00000012731csde110073.777ENSSARG00000000738CSDE19473.777Sorex_araneus
ENSGMOG00000012731csde110078.473ENSSPUG00000008714CSDE19978.473Sphenodon_punctatus
ENSGMOG00000012731csde110090.602ENSSPAG00000000716csde19987.469Stegastes_partitus
ENSGMOG00000012731csde110077.096ENSSSCG00000006752CSDE19974.529Sus_scrofa
ENSGMOG00000012731csde110077.029ENSTGUG00000000972CSDE19977.029Taeniopygia_guttata
ENSGMOG00000012731csde110081.704ENSTRUG00000007996csde19981.704Takifugu_rubripes
ENSGMOG00000012731csde19390.805ENSTNIG00000010878csde110090.805Tetraodon_nigroviridis
ENSGMOG00000012731csde17676.923ENSTBEG00000011880-6076.923Tupaia_belangeri
ENSGMOG00000012731csde110073.777ENSTTRG00000015583CSDE19473.777Tursiops_truncatus
ENSGMOG00000012731csde19069.939ENSUAMG00000024289-9969.939Ursus_americanus
ENSGMOG00000012731csde18981.107ENSUAMG00000021779-9981.107Ursus_americanus
ENSGMOG00000012731csde110068.507ENSUMAG00000009720-9768.507Ursus_maritimus
ENSGMOG00000012731csde19772.749ENSUMAG00000011714-9972.749Ursus_maritimus
ENSGMOG00000012731csde110074.528ENSVPAG00000000749CSDE17974.528Vicugna_pacos
ENSGMOG00000012731csde19376.239ENSVVUG00000009890CSDE19476.239Vulpes_vulpes
ENSGMOG00000012731csde110077.556ENSXETG00000021448csde19977.556Xenopus_tropicalis
ENSGMOG00000012731csde19583.640ENSXCOG00000000035csde19983.640Xiphophorus_couchianus
ENSGMOG00000012731csde110087.594ENSXMAG00000009080csde19985.140Xiphophorus_maculatus

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