EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000012843 (Gene tree)
Gene ID: -
Gene Symbol: lig4
Alias: zgc:165595
Full Name: ligase IV%2C DNA%2C ATP-dependent
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 4025 bases
Position: chrGeneScaffold_2833:109378-113402
Accession: ZDB-GENE-070820-10
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013746	RNA_ligase	PF09414.10	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014107	-	2340	-	ENSGMOP00000013746	780 (aa)	-	UPI00023F27A6

Gene Model

Click here to download ENSGMOG00000012843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012843	lig4	99	64.698	ENSG00000174405	LIG4	85	64.861	Homo_sapiens
ENSGMOG00000012843	lig4	99	78.361	ENSAPOG00000000866	lig4	86	78.361	Acanthochromis_polyacanthus
ENSGMOG00000012843	lig4	99	63.800	ENSAMEG00000019685	LIG4	85	63.800	Ailuropoda_melanoleuca
ENSGMOG00000012843	lig4	99	78.378	ENSACIG00000018309	lig4	85	78.378	Amphilophus_citrinellus
ENSGMOG00000012843	lig4	99	78.361	ENSAOCG00000011768	lig4	86	78.361	Amphiprion_ocellaris
ENSGMOG00000012843	lig4	99	78.617	ENSAPEG00000017815	lig4	86	78.617	Amphiprion_percula
ENSGMOG00000012843	lig4	99	79.359	ENSATEG00000005583	lig4	85	79.359	Anabas_testudineus
ENSGMOG00000012843	lig4	96	64.058	ENSAPLG00000001673	LIG4	86	64.058	Anas_platyrhynchos
ENSGMOG00000012843	lig4	100	64.834	ENSACAG00000014566	LIG4	86	64.578	Anolis_carolinensis
ENSGMOG00000012843	lig4	99	64.359	ENSANAG00000012446	LIG4	85	64.359	Aotus_nancymaae
ENSGMOG00000012843	lig4	99	77.677	ENSACLG00000027051	lig4	85	77.378	Astatotilapia_calliptera
ENSGMOG00000012843	lig4	99	76.546	ENSAMXG00000008192	lig4	80	76.546	Astyanax_mexicanus
ENSGMOG00000012843	lig4	99	63.928	ENSBTAG00000015868	LIG4	91	63.928	Bos_taurus
ENSGMOG00000012843	lig4	99	64.129	ENSCJAG00000014689	LIG4	85	64.129	Callithrix_jacchus
ENSGMOG00000012843	lig4	99	63.928	ENSCAFG00000006031	LIG4	85	63.928	Canis_familiaris
ENSGMOG00000012843	lig4	99	63.928	ENSCAFG00020021230	LIG4	85	63.928	Canis_lupus_dingo
ENSGMOG00000012843	lig4	99	63.800	ENSCHIG00000001019	LIG4	85	63.800	Capra_hircus
ENSGMOG00000012843	lig4	99	63.695	ENSCAPG00000006284	LIG4	85	63.695	Cavia_aperea
ENSGMOG00000012843	lig4	99	63.566	ENSCPOG00000014266	LIG4	85	63.566	Cavia_porcellus
ENSGMOG00000012843	lig4	99	64.313	ENSCCAG00000019971	LIG4	85	64.313	Cebus_capucinus
ENSGMOG00000012843	lig4	99	64.442	ENSCATG00000021075	LIG4	85	64.442	Cercocebus_atys
ENSGMOG00000012843	lig4	99	64.221	ENSCLAG00000003376	LIG4	85	64.221	Chinchilla_lanigera
ENSGMOG00000012843	lig4	99	64.313	ENSCSAG00000000211	LIG4	85	64.313	Chlorocebus_sabaeus
ENSGMOG00000012843	lig4	99	66.366	ENSCPBG00000023291	LIG4	85	66.366	Chrysemys_picta_bellii
ENSGMOG00000012843	lig4	81	44.427	ENSCING00000009536	-	93	45.261	Ciona_intestinalis
ENSGMOG00000012843	lig4	97	42.444	ENSCSAVG00000010336	-	98	42.444	Ciona_savignyi
ENSGMOG00000012843	lig4	99	64.858	ENSCANG00000005805	LIG4	85	64.858	Colobus_angolensis_palliatus
ENSGMOG00000012843	lig4	99	63.928	ENSCGRG00001012072	Lig4	85	63.928	Cricetulus_griseus_chok1gshd
ENSGMOG00000012843	lig4	99	63.928	ENSCGRG00000013417	Lig4	85	63.928	Cricetulus_griseus_crigri
ENSGMOG00000012843	lig4	99	77.378	ENSCSEG00000013905	lig4	84	77.378	Cynoglossus_semilaevis
ENSGMOG00000012843	lig4	99	78.065	ENSCVAG00000007896	lig4	85	78.065	Cyprinodon_variegatus
ENSGMOG00000012843	lig4	99	75.902	ENSDARG00000060620	lig4	85	75.902	Danio_rerio
ENSGMOG00000012843	lig4	99	63.871	ENSDNOG00000000513	LIG4	85	63.871	Dasypus_novemcinctus
ENSGMOG00000012843	lig4	99	65.212	ENSDORG00000027303	Lig4	85	65.212	Dipodomys_ordii
ENSGMOG00000012843	lig4	97	32.010	FBgn0030506	Lig4	85	32.258	Drosophila_melanogaster
ENSGMOG00000012843	lig4	99	61.647	ENSETEG00000015563	LIG4	86	61.647	Echinops_telfairi
ENSGMOG00000012843	lig4	99	46.097	ENSEBUG00000014243	lig4	85	46.097	Eptatretus_burgeri
ENSGMOG00000012843	lig4	99	63.671	ENSEASG00005022073	LIG4	85	63.671	Equus_asinus_asinus
ENSGMOG00000012843	lig4	99	63.671	ENSECAG00000003257	LIG4	85	63.671	Equus_caballus
ENSGMOG00000012843	lig4	99	77.548	ENSELUG00000006787	lig4	85	77.548	Esox_lucius
ENSGMOG00000012843	lig4	99	64.056	ENSFCAG00000031985	LIG4	85	64.056	Felis_catus
ENSGMOG00000012843	lig4	99	63.835	ENSFALG00000004214	LIG4	94	63.835	Ficedula_albicollis
ENSGMOG00000012843	lig4	99	64.056	ENSFDAG00000008973	LIG4	85	64.056	Fukomys_damarensis
ENSGMOG00000012843	lig4	99	78.811	ENSFHEG00000007398	lig4	77	78.811	Fundulus_heteroclitus
ENSGMOG00000012843	lig4	99	64.093	ENSGALG00000016854	LIG4	85	64.093	Gallus_gallus
ENSGMOG00000012843	lig4	98	77.662	ENSGAFG00000019779	lig4	82	77.664	Gambusia_affinis
ENSGMOG00000012843	lig4	99	78.266	ENSGACG00000014135	lig4	85	78.266	Gasterosteus_aculeatus
ENSGMOG00000012843	lig4	99	64.442	ENSGGOG00000027771	LIG4	85	64.442	Gorilla_gorilla
ENSGMOG00000012843	lig4	99	77.249	ENSHBUG00000006245	lig4	85	77.249	Haplochromis_burtoni
ENSGMOG00000012843	lig4	99	64.729	ENSHGLG00000000718	LIG4	85	64.729	Heterocephalus_glaber_female
ENSGMOG00000012843	lig4	99	64.729	ENSHGLG00100003265	LIG4	85	64.729	Heterocephalus_glaber_male
ENSGMOG00000012843	lig4	99	77.003	ENSHCOG00000012010	lig4	85	76.744	Hippocampus_comes
ENSGMOG00000012843	lig4	99	74.031	ENSIPUG00000013748	lig4	85	74.031	Ictalurus_punctatus
ENSGMOG00000012843	lig4	99	64.056	ENSSTOG00000024303	LIG4	85	64.056	Ictidomys_tridecemlineatus
ENSGMOG00000012843	lig4	99	64.570	ENSJJAG00000006750	Lig4	85	64.570	Jaculus_jaculus
ENSGMOG00000012843	lig4	99	79.589	ENSKMAG00000001149	lig4	85	79.589	Kryptolebias_marmoratus
ENSGMOG00000012843	lig4	90	78.805	ENSLBEG00000014578	lig4	85	78.805	Labrus_bergylta
ENSGMOG00000012843	lig4	99	67.526	ENSLACG00000003282	LIG4	85	67.526	Latimeria_chalumnae
ENSGMOG00000012843	lig4	99	70.232	ENSLOCG00000008901	lig4	84	70.232	Lepisosteus_oculatus
ENSGMOG00000012843	lig4	99	62.949	ENSLAFG00000031152	LIG4	85	62.949	Loxodonta_africana
ENSGMOG00000012843	lig4	99	64.442	ENSMFAG00000037235	LIG4	85	64.442	Macaca_fascicularis
ENSGMOG00000012843	lig4	99	64.313	ENSMMUG00000008874	LIG4	85	64.313	Macaca_mulatta
ENSGMOG00000012843	lig4	99	64.442	ENSMNEG00000023575	LIG4	85	64.442	Macaca_nemestrina
ENSGMOG00000012843	lig4	99	64.313	ENSMLEG00000026720	LIG4	85	64.313	Mandrillus_leucophaeus
ENSGMOG00000012843	lig4	99	78.839	ENSMAMG00000008472	lig4	84	78.839	Mastacembelus_armatus
ENSGMOG00000012843	lig4	99	77.378	ENSMZEG00005001855	lig4	85	77.378	Maylandia_zebra
ENSGMOG00000012843	lig4	99	63.707	ENSMGAG00000015532	LIG4	85	63.707	Meleagris_gallopavo
ENSGMOG00000012843	lig4	99	64.341	ENSMOCG00000019000	Lig4	85	64.341	Microtus_ochrogaster
ENSGMOG00000012843	lig4	99	78.811	ENSMMOG00000004390	lig4	85	78.295	Mola_mola
ENSGMOG00000012843	lig4	99	64.000	ENSMODG00000025064	LIG4	85	63.718	Monodelphis_domestica
ENSGMOG00000012843	lig4	99	78.295	ENSMALG00000008555	lig4	85	78.295	Monopterus_albus
ENSGMOG00000012843	lig4	99	64.341	MGP_CAROLIEiJ_G0030809	Lig4	85	64.341	Mus_caroli
ENSGMOG00000012843	lig4	99	64.212	ENSMUSG00000049717	Lig4	85	64.212	Mus_musculus
ENSGMOG00000012843	lig4	99	64.212	MGP_PahariEiJ_G0021270	Lig4	85	64.212	Mus_pahari
ENSGMOG00000012843	lig4	99	64.470	MGP_SPRETEiJ_G0031917	Lig4	85	64.470	Mus_spretus
ENSGMOG00000012843	lig4	99	64.083	ENSMPUG00000018675	LIG4	85	64.083	Mustela_putorius_furo
ENSGMOG00000012843	lig4	99	64.056	ENSMLUG00000001267	LIG4	85	64.056	Myotis_lucifugus
ENSGMOG00000012843	lig4	99	64.827	ENSNGAG00000013258	Lig4	85	64.827	Nannospalax_galili
ENSGMOG00000012843	lig4	99	77.378	ENSNBRG00000021252	lig4	85	77.378	Neolamprologus_brichardi
ENSGMOG00000012843	lig4	99	63.928	ENSNLEG00000007888	LIG4	85	63.928	Nomascus_leucogenys
ENSGMOG00000012843	lig4	99	63.928	ENSOPRG00000005765	LIG4	85	63.928	Ochotona_princeps
ENSGMOG00000012843	lig4	99	64.083	ENSODEG00000019683	LIG4	85	63.835	Octodon_degus
ENSGMOG00000012843	lig4	99	77.635	ENSONIG00000011969	lig4	84	77.635	Oreochromis_niloticus
ENSGMOG00000012843	lig4	99	65.340	ENSOCUG00000015734	LIG4	85	65.340	Oryctolagus_cuniculus
ENSGMOG00000012843	lig4	99	77.249	ENSORLG00000004041	lig4	85	77.249	Oryzias_latipes
ENSGMOG00000012843	lig4	99	77.110	ENSORLG00020019607	lig4	86	77.110	Oryzias_latipes_hni
ENSGMOG00000012843	lig4	99	77.238	ENSORLG00015017754	lig4	86	77.238	Oryzias_latipes_hsok
ENSGMOG00000012843	lig4	87	78.287	ENSOMEG00000003459	lig4	98	78.287	Oryzias_melastigma
ENSGMOG00000012843	lig4	99	64.812	ENSOGAG00000032120	LIG4	84	64.812	Otolemur_garnettii
ENSGMOG00000012843	lig4	94	64.363	ENSOARG00000005590	LIG4	97	64.363	Ovis_aries
ENSGMOG00000012843	lig4	99	63.928	ENSPPAG00000032998	LIG4	85	63.928	Pan_paniscus
ENSGMOG00000012843	lig4	99	64.056	ENSPPRG00000017804	LIG4	85	64.056	Panthera_pardus
ENSGMOG00000012843	lig4	99	64.185	ENSPTIG00000010051	LIG4	85	64.185	Panthera_tigris_altaica
ENSGMOG00000012843	lig4	99	64.056	ENSPTRG00000006025	LIG4	85	64.056	Pan_troglodytes
ENSGMOG00000012843	lig4	99	64.570	ENSPANG00000007562	LIG4	85	64.570	Papio_anubis
ENSGMOG00000012843	lig4	99	73.514	ENSPKIG00000011645	lig4	84	73.514	Paramormyrops_kingsleyae
ENSGMOG00000012843	lig4	99	65.982	ENSPSIG00000001504	LIG4	85	65.982	Pelodiscus_sinensis
ENSGMOG00000012843	lig4	99	74.194	ENSPMGG00000013486	lig4	85	74.583	Periophthalmus_magnuspinnatus
ENSGMOG00000012843	lig4	99	63.543	ENSPEMG00000000076	Lig4	85	63.158	Peromyscus_maniculatus_bairdii
ENSGMOG00000012843	lig4	99	63.484	ENSPCIG00000021882	LIG4	85	62.949	Phascolarctos_cinereus
ENSGMOG00000012843	lig4	98	78.312	ENSPFOG00000000797	lig4	86	78.306	Poecilia_formosa
ENSGMOG00000012843	lig4	98	78.312	ENSPLAG00000001196	lig4	86	78.306	Poecilia_latipinna
ENSGMOG00000012843	lig4	98	78.312	ENSPMEG00000021353	lig4	86	78.306	Poecilia_mexicana
ENSGMOG00000012843	lig4	98	78.052	ENSPREG00000007323	lig4	86	78.049	Poecilia_reticulata
ENSGMOG00000012843	lig4	99	64.056	ENSPPYG00000005540	LIG4	85	64.056	Pongo_abelii
ENSGMOG00000012843	lig4	99	63.543	ENSPVAG00000016403	LIG4	85	63.543	Pteropus_vampyrus
ENSGMOG00000012843	lig4	99	77.548	ENSPNYG00000009660	lig4	85	77.249	Pundamilia_nyererei
ENSGMOG00000012843	lig4	99	77.649	ENSPNAG00000028069	LIG4	85	77.649	Pygocentrus_nattereri
ENSGMOG00000012843	lig4	99	77.649	ENSPNAG00000028056	lig4	85	77.649	Pygocentrus_nattereri
ENSGMOG00000012843	lig4	99	64.212	ENSRNOG00000014605	Lig4	85	64.212	Rattus_norvegicus
ENSGMOG00000012843	lig4	99	63.753	ENSRBIG00000039962	LIG4	85	63.753	Rhinopithecus_bieti
ENSGMOG00000012843	lig4	99	64.570	ENSRROG00000006040	LIG4	85	64.570	Rhinopithecus_roxellana
ENSGMOG00000012843	lig4	99	64.744	ENSSBOG00000019029	LIG4	85	64.744	Saimiri_boliviensis_boliviensis
ENSGMOG00000012843	lig4	99	60.897	ENSSHAG00000009525	LIG4	85	60.897	Sarcophilus_harrisii
ENSGMOG00000012843	lig4	99	74.031	ENSSFOG00015012835	lig4	85	74.031	Scleropages_formosus
ENSGMOG00000012843	lig4	97	77.207	ENSSMAG00000011267	lig4	85	77.207	Scophthalmus_maximus
ENSGMOG00000012843	lig4	99	78.306	ENSSDUG00000010343	lig4	85	78.306	Seriola_dumerili
ENSGMOG00000012843	lig4	99	77.419	ENSSLDG00000003239	lig4	85	77.150	Seriola_lalandi_dorsalis
ENSGMOG00000012843	lig4	99	65.593	ENSSARG00000006573	LIG4	85	65.593	Sorex_araneus
ENSGMOG00000012843	lig4	92	66.250	ENSSPUG00000002444	LIG4	85	66.250	Sphenodon_punctatus
ENSGMOG00000012843	lig4	99	78.323	ENSSPAG00000001609	lig4	85	78.323	Stegastes_partitus
ENSGMOG00000012843	lig4	99	64.313	ENSSSCG00000009540	LIG4	85	64.313	Sus_scrofa
ENSGMOG00000012843	lig4	99	63.824	ENSTGUG00000010795	LIG4	85	63.824	Taeniopygia_guttata
ENSGMOG00000012843	lig4	99	77.022	ENSTRUG00000009984	lig4	85	77.022	Takifugu_rubripes
ENSGMOG00000012843	lig4	99	76.455	ENSTNIG00000010348	lig4	86	76.714	Tetraodon_nigroviridis
ENSGMOG00000012843	lig4	99	64.827	ENSTBEG00000017741	LIG4	85	64.827	Tupaia_belangeri
ENSGMOG00000012843	lig4	99	63.671	ENSTTRG00000012660	LIG4	85	63.671	Tursiops_truncatus
ENSGMOG00000012843	lig4	99	63.286	ENSUAMG00000003773	LIG4	85	63.286	Ursus_americanus
ENSGMOG00000012843	lig4	99	65.429	ENSXETG00000002654	lig4	85	65.429	Xenopus_tropicalis
ENSGMOG00000012843	lig4	98	77.922	ENSXCOG00000017401	lig4	85	78.036	Xiphophorus_couchianus
ENSGMOG00000012843	lig4	99	78.065	ENSXMAG00000015142	lig4	85	78.177	Xiphophorus_maculatus