EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000012906 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 4442 bases
Position: chrGeneScaffold_4590:67293-71734
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013809	RRM_1	PF00076.22	7.7e-31	1	2
ENSGMOP00000013809	RRM_1	PF00076.22	7.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014171	-	942	-	ENSGMOP00000013809	314 (aa)	-	UPI00023F26F3

Gene Model

Click here to download ENSGMOG00000012906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000012906	srsf4	54	34.286	ENSGMOG00000009633	rbm14b	70	32.941
ENSGMOG00000012906	srsf4	55	51.142	ENSGMOG00000000595	srsf5b	96	49.772
ENSGMOG00000012906	srsf4	52	45.833	ENSGMOG00000014787	-	68	44.970
ENSGMOG00000012906	srsf4	55	61.932	ENSGMOG00000000869	srsf5a	93	61.932
ENSGMOG00000012906	srsf4	56	69.444	ENSGMOG00000014458	srsf6a	52	67.150
ENSGMOG00000012906	srsf4	55	66.474	ENSGMOG00000006105	srsf6a	62	64.773
ENSGMOG00000012906	srsf4	55	39.683	ENSGMOG00000007980	srsf9	73	39.247
ENSGMOG00000012906	srsf4	54	44.000	ENSGMOG00000010606	-	90	43.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012906	srsf4	81	66.667	ENSG00000116350	SRSF4	58	88.462	Homo_sapiens
ENSGMOG00000012906	srsf4	73	58.091	ENSAPOG00000023399	-	60	69.663	Acanthochromis_polyacanthus
ENSGMOG00000012906	srsf4	57	89.385	ENSACIG00000018649	srsf4	90	86.777	Amphilophus_citrinellus
ENSGMOG00000012906	srsf4	52	87.037	ENSAOCG00000005997	srsf4	92	88.272	Amphiprion_ocellaris
ENSGMOG00000012906	srsf4	56	72.527	ENSACLG00000021269	-	51	72.527	Astatotilapia_calliptera
ENSGMOG00000012906	srsf4	81	68.235	ENSACLG00000003395	srsf4	64	94.872	Astatotilapia_calliptera
ENSGMOG00000012906	srsf4	57	88.827	ENSAMXG00000034811	srsf4	76	89.744	Astyanax_mexicanus
ENSGMOG00000012906	srsf4	85	51.943	ENSCING00000011362	-	65	58.919	Ciona_intestinalis
ENSGMOG00000012906	srsf4	56	56.398	ENSCING00000012370	-	68	59.596	Ciona_intestinalis
ENSGMOG00000012906	srsf4	61	52.607	ENSCING00000024718	-	62	52.133	Ciona_intestinalis
ENSGMOG00000012906	srsf4	56	57.071	ENSCING00000020631	-	79	57.513	Ciona_intestinalis
ENSGMOG00000012906	srsf4	83	54.064	ENSCSAVG00000002581	-	70	61.622	Ciona_savignyi
ENSGMOG00000012906	srsf4	54	92.647	ENSCSEG00000010058	srsf4	75	87.603	Cynoglossus_semilaevis
ENSGMOG00000012906	srsf4	57	87.363	ENSDARG00000105293	srsf4	74	91.026	Danio_rerio
ENSGMOG00000012906	srsf4	55	61.749	FBgn0004587	B52	95	54.478	Drosophila_melanogaster
ENSGMOG00000012906	srsf4	50	62.112	ENSEBUG00000003129	srsf4	68	62.581	Eptatretus_burgeri
ENSGMOG00000012906	srsf4	61	56.853	ENSEBUG00000001681	srsf4	67	59.777	Eptatretus_burgeri
ENSGMOG00000012906	srsf4	57	77.835	ENSELUG00000017551	srsf4	93	74.615	Esox_lucius
ENSGMOG00000012906	srsf4	57	89.888	ENSFHEG00000007472	srsf4	84	96.154	Fundulus_heteroclitus
ENSGMOG00000012906	srsf4	57	90.556	ENSGAFG00000018496	srsf4	65	78.889	Gambusia_affinis
ENSGMOG00000012906	srsf4	57	93.296	ENSGACG00000002389	srsf4	88	72.917	Gasterosteus_aculeatus
ENSGMOG00000012906	srsf4	76	72.374	ENSHCOG00000012540	srsf4	68	87.500	Hippocampus_comes
ENSGMOG00000012906	srsf4	57	90.556	ENSKMAG00000013631	srsf4	81	76.329	Kryptolebias_marmoratus
ENSGMOG00000012906	srsf4	56	71.823	ENSLOCG00000001442	-	50	73.224	Lepisosteus_oculatus
ENSGMOG00000012906	srsf4	57	89.560	ENSMAMG00000004888	srsf4	70	90.083	Mastacembelus_armatus
ENSGMOG00000012906	srsf4	81	68.235	ENSMZEG00005026275	srsf4	64	94.872	Maylandia_zebra
ENSGMOG00000012906	srsf4	98	68.051	ENSMMOG00000013653	srsf4	64	92.647	Mola_mola
ENSGMOG00000012906	srsf4	56	84.746	ENSMODG00000011052	SRSF4	55	84.831	Monodelphis_domestica
ENSGMOG00000012906	srsf4	78	73.171	ENSMALG00000013392	srsf4	66	85.955	Monopterus_albus
ENSGMOG00000012906	srsf4	75	60.166	ENSNLEG00000030787	-	62	64.246	Nomascus_leucogenys
ENSGMOG00000012906	srsf4	57	88.333	ENSORLG00020016052	srsf4	66	88.764	Oryzias_latipes_hni
ENSGMOG00000012906	srsf4	57	88.333	ENSORLG00015007566	srsf4	71	88.764	Oryzias_latipes_hsok
ENSGMOG00000012906	srsf4	57	88.333	ENSOMEG00000005541	srsf4	51	88.764	Oryzias_melastigma
ENSGMOG00000012906	srsf4	57	85.263	ENSPMGG00000013436	srsf4	95	79.528	Periophthalmus_magnuspinnatus
ENSGMOG00000012906	srsf4	56	62.983	ENSPMAG00000009397	srsf4	68	63.187	Petromyzon_marinus
ENSGMOG00000012906	srsf4	82	77.432	ENSPLAG00000008812	srsf4	55	87.368	Poecilia_latipinna
ENSGMOG00000012906	srsf4	57	90.556	ENSPREG00000009639	srsf4	50	89.326	Poecilia_reticulata
ENSGMOG00000012906	srsf4	57	86.813	ENSPNYG00000003796	srsf4	56	86.188	Pundamilia_nyererei
ENSGMOG00000012906	srsf4	56	92.000	ENSPNAG00000023844	srsf4	53	92.090	Pygocentrus_nattereri
ENSGMOG00000012906	srsf4	56	92.045	ENSSFOG00015020292	srsf4	82	90.351	Scleropages_formosus
ENSGMOG00000012906	srsf4	57	88.649	ENSSMAG00000001707	srsf4	73	69.333	Scophthalmus_maximus
ENSGMOG00000012906	srsf4	57	88.827	ENSSDUG00000007387	srsf4	54	90.449	Seriola_dumerili
ENSGMOG00000012906	srsf4	57	78.771	ENSSLDG00000009745	srsf4	61	78.652	Seriola_lalandi_dorsalis
ENSGMOG00000012906	srsf4	70	82.379	ENSSPAG00000014538	srsf4	83	90.083	Stegastes_partitus
ENSGMOG00000012906	srsf4	57	87.778	ENSTRUG00000011891	srsf4	62	82.812	Takifugu_rubripes
ENSGMOG00000012906	srsf4	57	89.944	ENSXCOG00000018826	srsf4	89	80.508	Xiphophorus_couchianus
ENSGMOG00000012906	srsf4	56	69.681	ENSXCOG00000003212	-	67	54.894	Xiphophorus_couchianus