EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000012988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2358 bases
Position: chrGeneScaffold_4211:28362-30719
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000013943	DEAD	PF00270.29	3e-13	1	1
ENSGMOP00000013959	DEAD	PF00270.29	4.8e-13	1	1
ENSGMOP00000013934	DEAD	PF00270.29	5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014306	-	999	-	ENSGMOP00000013943	333 (aa)	-	UPI00023F286C
ENSGMOT00000014297	-	1296	-	ENSGMOP00000013934	432 (aa)	-	UPI00023F286B
ENSGMOT00000014322	-	1278	-	ENSGMOP00000013959	426 (aa)	-	UPI00023F286D

Gene Model

Click here to download ENSGMOG00000012988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000012988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000012988	-	95	68.750	ENSGMOG00000013063	-	96	53.957
ENSGMOG00000012988	-	98	58.548	ENSGMOG00000010761	-	98	58.548
ENSGMOG00000012988	-	99	77.143	ENSGMOG00000010772	-	95	61.111
ENSGMOG00000012988	-	97	33.882	ENSGMOG00000010504	recql	80	33.882
ENSGMOG00000012988	-	99	65.552	ENSGMOG00000010827	-	97	64.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000012988	-	73	36.082	ENSAPOG00000009732	-	88	36.082	Acanthochromis_polyacanthus
ENSGMOG00000012988	-	99	48.718	ENSCAFG00020016111	BLM	51	48.718	Canis_lupus_dingo
ENSGMOG00000012988	-	99	49.184	ENSCATG00000040609	BLM	74	50.000	Cercocebus_atys
ENSGMOG00000012988	-	99	35.880	ENSCING00000021036	-	74	35.648	Ciona_intestinalis
ENSGMOG00000012988	-	99	36.782	ENSCSAVG00000007521	-	71	36.782	Ciona_savignyi
ENSGMOG00000012988	-	87	45.213	ENSEBUG00000015743	-	53	45.213	Eptatretus_burgeri
ENSGMOG00000012988	-	100	51.370	ENSGACG00000010863	blm	81	51.282	Gasterosteus_aculeatus
ENSGMOG00000012988	-	99	48.718	ENSGGOG00000007710	BLM	74	49.342	Gorilla_gorilla
ENSGMOG00000012988	-	99	52.778	ENSLBEG00000018729	blm	50	52.778	Labrus_bergylta
ENSGMOG00000012988	-	99	49.184	ENSMFAG00000042982	BLM	78	47.826	Macaca_fascicularis
ENSGMOG00000012988	-	99	49.184	ENSMMUG00000019526	BLM	74	50.000	Macaca_mulatta
ENSGMOG00000012988	-	99	49.184	ENSMNEG00000031251	BLM	74	50.000	Macaca_nemestrina
ENSGMOG00000012988	-	97	49.282	ENSOANG00000009316	-	54	49.282	Ornithorhynchus_anatinus
ENSGMOG00000012988	-	99	49.184	ENSPANG00000018572	BLM	74	50.000	Papio_anubis
ENSGMOG00000012988	-	79	48.837	ENSPSIG00000009792	BLM	60	48.837	Pelodiscus_sinensis
ENSGMOG00000012988	-	99	45.455	ENSPMAG00000000445	blm	57	45.455	Petromyzon_marinus
ENSGMOG00000012988	-	99	48.718	ENSRBIG00000029656	BLM	74	49.342	Rhinopithecus_bieti
ENSGMOG00000012988	-	99	48.718	ENSRROG00000037871	BLM	74	49.342	Rhinopithecus_roxellana
ENSGMOG00000012988	-	99	48.951	ENSUMAG00000009105	BLM	56	48.951	Ursus_maritimus