EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000013063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 3362 bases
Position: chrGeneScaffold_4211:54319-57680
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014058	DEAD	PF00270.29	1.3e-09	1	1
ENSGMOP00000014042	DEAD	PF00270.29	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014405	-	1287	-	ENSGMOP00000014042	428 (aa)	-	UPI00023F274E
ENSGMOT00000014421	-	1203	-	ENSGMOP00000014058	401 (aa)	-	UPI00023F274F

Gene Model

Click here to download ENSGMOG00000013063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000013063	-	96	53.957	ENSGMOG00000012988	-	95	68.750
ENSGMOG00000013063	-	97	31.579	ENSGMOG00000010504	recql	81	31.579
ENSGMOG00000013063	-	99	56.512	ENSGMOG00000010772	-	97	56.512
ENSGMOG00000013063	-	99	63.318	ENSGMOG00000010827	-	98	63.318
ENSGMOG00000013063	-	96	58.696	ENSGMOG00000010761	-	97	58.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013063	-	99	45.305	ENSCAFG00020016111	BLM	51	45.305	Canis_lupus_dingo
ENSGMOG00000013063	-	99	45.540	ENSCATG00000040609	BLM	74	44.000	Cercocebus_atys
ENSGMOG00000013063	-	98	33.575	ENSCING00000021036	-	73	34.783	Ciona_intestinalis
ENSGMOG00000013063	-	98	32.850	ENSCSAVG00000007521	-	70	33.976	Ciona_savignyi
ENSGMOG00000013063	-	86	44.444	ENSEBUG00000015743	-	53	44.444	Eptatretus_burgeri
ENSGMOG00000013063	-	99	49.767	ENSGACG00000010863	blm	80	50.481	Gasterosteus_aculeatus
ENSGMOG00000013063	-	99	45.305	ENSGGOG00000007710	BLM	75	43.377	Gorilla_gorilla
ENSGMOG00000013063	-	99	50.816	ENSLBEG00000018729	blm	51	50.816	Labrus_bergylta
ENSGMOG00000013063	-	99	45.305	ENSMFAG00000042982	BLM	74	43.667	Macaca_fascicularis
ENSGMOG00000013063	-	99	45.305	ENSMMUG00000019526	BLM	74	43.667	Macaca_mulatta
ENSGMOG00000013063	-	99	45.305	ENSMNEG00000031251	BLM	74	43.667	Macaca_nemestrina
ENSGMOG00000013063	-	95	47.677	ENSOANG00000009316	-	53	47.677	Ornithorhynchus_anatinus
ENSGMOG00000013063	-	99	45.305	ENSPANG00000018572	BLM	74	43.667	Papio_anubis
ENSGMOG00000013063	-	78	48.810	ENSPSIG00000009792	BLM	60	48.810	Pelodiscus_sinensis
ENSGMOG00000013063	-	98	44.731	ENSPMAG00000000445	blm	57	44.731	Petromyzon_marinus
ENSGMOG00000013063	-	99	45.070	ENSRBIG00000029656	BLM	75	43.046	Rhinopithecus_bieti
ENSGMOG00000013063	-	99	45.070	ENSRROG00000037871	BLM	75	43.046	Rhinopithecus_roxellana
ENSGMOG00000013063	-	99	45.540	ENSUMAG00000009105	BLM	56	45.540	Ursus_maritimus