EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000013146 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 9557 bases
Position: chrGeneScaffold_2965:2482-12038
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014062	tRNA_int_end_N2	PF12928.7	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014425	-	1110	-	ENSGMOP00000014062	369 (aa)	-	UPI00023F2A91

Gene Model

Click here to download ENSGMOG00000013146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013146	tsen54	99	45.029	ENSG00000182173	TSEN54	76	58.182	Homo_sapiens
ENSGMOG00000013146	tsen54	99	58.696	ENSAPOG00000009659	tsen54	82	63.107	Acanthochromis_polyacanthus
ENSGMOG00000013146	tsen54	82	45.833	ENSAMEG00000009414	TSEN54	79	44.388	Ailuropoda_melanoleuca
ENSGMOG00000013146	tsen54	98	59.016	ENSAOCG00000000152	tsen54	81	59.016	Amphiprion_ocellaris
ENSGMOG00000013146	tsen54	98	59.016	ENSAPEG00000018931	tsen54	80	59.016	Amphiprion_percula
ENSGMOG00000013146	tsen54	98	58.011	ENSATEG00000019860	tsen54	79	58.242	Anabas_testudineus
ENSGMOG00000013146	tsen54	85	47.581	ENSAPLG00000009419	TSEN54	86	47.581	Anas_platyrhynchos
ENSGMOG00000013146	tsen54	99	46.486	ENSACAG00000006714	TSEN54	82	46.486	Anolis_carolinensis
ENSGMOG00000013146	tsen54	95	45.833	ENSANAG00000024061	TSEN54	87	40.816	Aotus_nancymaae
ENSGMOG00000013146	tsen54	99	57.360	ENSACLG00000019800	tsen54	83	57.360	Astatotilapia_calliptera
ENSGMOG00000013146	tsen54	99	59.341	ENSAMXG00000006546	tsen54	85	59.341	Astyanax_mexicanus
ENSGMOG00000013146	tsen54	98	45.556	ENSBTAG00000000824	TSEN54	77	45.902	Bos_taurus
ENSGMOG00000013146	tsen54	95	45.833	ENSCJAG00000014278	TSEN54	87	40.183	Callithrix_jacchus
ENSGMOG00000013146	tsen54	82	45.833	ENSCAFG00000004798	TSEN54	75	45.833	Canis_familiaris
ENSGMOG00000013146	tsen54	82	45.833	ENSCAFG00020000312	TSEN54	75	45.833	Canis_lupus_dingo
ENSGMOG00000013146	tsen54	96	46.154	ENSCHIG00000019908	TSEN54	79	47.027	Capra_hircus
ENSGMOG00000013146	tsen54	70	48.515	ENSTSYG00000037439	TSEN54	80	45.000	Carlito_syrichta
ENSGMOG00000013146	tsen54	99	44.324	ENSCCAG00000036624	TSEN54	87	40.816	Cebus_capucinus
ENSGMOG00000013146	tsen54	99	47.399	ENSCATG00000042877	TSEN54	89	41.627	Cercocebus_atys
ENSGMOG00000013146	tsen54	99	42.000	ENSCLAG00000002924	TSEN54	85	42.000	Chinchilla_lanigera
ENSGMOG00000013146	tsen54	99	45.614	ENSCSAG00000004809	TSEN54	90	40.310	Chlorocebus_sabaeus
ENSGMOG00000013146	tsen54	99	47.027	ENSCPBG00000028071	TSEN54	84	47.027	Chrysemys_picta_bellii
ENSGMOG00000013146	tsen54	99	44.865	ENSCANG00000028053	TSEN54	90	39.922	Colobus_angolensis_palliatus
ENSGMOG00000013146	tsen54	90	50.000	ENSCGRG00001020029	Tsen54	76	45.238	Cricetulus_griseus_chok1gshd
ENSGMOG00000013146	tsen54	75	62.295	ENSCGRG00000016289	Tsen54	66	62.295	Cricetulus_griseus_crigri
ENSGMOG00000013146	tsen54	80	55.000	ENSCSEG00000020586	tsen54	79	55.000	Cynoglossus_semilaevis
ENSGMOG00000013146	tsen54	83	43.719	ENSDARG00000036844	tsen54	99	44.862	Danio_rerio
ENSGMOG00000013146	tsen54	82	45.238	ENSDNOG00000018452	TSEN54	79	43.348	Dasypus_novemcinctus
ENSGMOG00000013146	tsen54	96	47.024	ENSDORG00000004073	Tsen54	79	47.024	Dipodomys_ordii
ENSGMOG00000013146	tsen54	80	41.905	ENSEBUG00000005203	TSEN54	61	41.905	Eptatretus_burgeri
ENSGMOG00000013146	tsen54	96	45.405	ENSEASG00005000579	TSEN54	78	45.405	Equus_asinus_asinus
ENSGMOG00000013146	tsen54	96	45.405	ENSECAG00000004924	TSEN54	80	45.405	Equus_caballus
ENSGMOG00000013146	tsen54	84	48.544	ENSEEUG00000008467	TSEN54	75	48.598	Erinaceus_europaeus
ENSGMOG00000013146	tsen54	99	58.242	ENSELUG00000017703	tsen54	73	58.242	Esox_lucius
ENSGMOG00000013146	tsen54	82	45.833	ENSFCAG00000023712	TSEN54	79	43.830	Felis_catus
ENSGMOG00000013146	tsen54	88	46.309	ENSFALG00000001119	TSEN54	75	44.578	Ficedula_albicollis
ENSGMOG00000013146	tsen54	85	46.721	ENSFDAG00000019090	TSEN54	77	46.721	Fukomys_damarensis
ENSGMOG00000013146	tsen54	99	59.358	ENSFHEG00000005470	tsen54	85	59.358	Fundulus_heteroclitus
ENSGMOG00000013146	tsen54	94	40.331	ENSGALG00000047163	TSEN54	80	40.331	Gallus_gallus
ENSGMOG00000013146	tsen54	99	58.854	ENSGAFG00000005111	tsen54	84	58.854	Gambusia_affinis
ENSGMOG00000013146	tsen54	99	48.817	ENSGACG00000014987	tsen54	99	49.677	Gasterosteus_aculeatus
ENSGMOG00000013146	tsen54	96	47.568	ENSGAGG00000006825	TSEN54	78	47.568	Gopherus_agassizii
ENSGMOG00000013146	tsen54	99	45.029	ENSGGOG00000009417	TSEN54	93	39.726	Gorilla_gorilla
ENSGMOG00000013146	tsen54	86	56.853	ENSHBUG00000018296	tsen54	75	56.853	Haplochromis_burtoni
ENSGMOG00000013146	tsen54	99	45.503	ENSHGLG00000007979	TSEN54	81	45.503	Heterocephalus_glaber_female
ENSGMOG00000013146	tsen54	99	42.857	ENSHGLG00100005497	TSEN54	81	42.857	Heterocephalus_glaber_male
ENSGMOG00000013146	tsen54	83	42.298	ENSHCOG00000007481	tsen54	99	41.849	Hippocampus_comes
ENSGMOG00000013146	tsen54	99	55.952	ENSIPUG00000000590	tsen54	84	55.952	Ictalurus_punctatus
ENSGMOG00000013146	tsen54	99	45.833	ENSSTOG00000012883	TSEN54	81	45.833	Ictidomys_tridecemlineatus
ENSGMOG00000013146	tsen54	95	47.059	ENSJJAG00000007365	Tsen54	78	46.471	Jaculus_jaculus
ENSGMOG00000013146	tsen54	99	57.513	ENSKMAG00000006944	tsen54	80	57.513	Kryptolebias_marmoratus
ENSGMOG00000013146	tsen54	99	57.513	ENSLBEG00000004199	tsen54	82	57.513	Labrus_bergylta
ENSGMOG00000013146	tsen54	99	45.545	ENSLACG00000009497	TSEN54	85	45.545	Latimeria_chalumnae
ENSGMOG00000013146	tsen54	97	53.191	ENSLOCG00000011191	tsen54	78	53.514	Lepisosteus_oculatus
ENSGMOG00000013146	tsen54	77	45.128	ENSLAFG00000011655	TSEN54	81	40.856	Loxodonta_africana
ENSGMOG00000013146	tsen54	99	48.428	ENSMFAG00000000712	TSEN54	90	42.029	Macaca_fascicularis
ENSGMOG00000013146	tsen54	99	48.428	ENSMNEG00000029199	TSEN54	90	42.029	Macaca_nemestrina
ENSGMOG00000013146	tsen54	85	50.549	ENSMLEG00000044168	TSEN54	77	42.857	Mandrillus_leucophaeus
ENSGMOG00000013146	tsen54	96	58.011	ENSMAMG00000019773	tsen54	82	56.842	Mastacembelus_armatus
ENSGMOG00000013146	tsen54	99	57.868	ENSMZEG00005000884	tsen54	83	57.868	Maylandia_zebra
ENSGMOG00000013146	tsen54	86	46.825	ENSMGAG00000009556	TSEN54	74	42.424	Meleagris_gallopavo
ENSGMOG00000013146	tsen54	92	46.429	ENSMAUG00000016838	Tsen54	76	46.429	Mesocricetus_auratus
ENSGMOG00000013146	tsen54	82	46.429	ENSMICG00000044012	TSEN54	83	44.103	Microcebus_murinus
ENSGMOG00000013146	tsen54	98	45.238	ENSMOCG00000021585	Tsen54	79	45.238	Microtus_ochrogaster
ENSGMOG00000013146	tsen54	99	45.898	ENSMMOG00000020189	tsen54	99	46.785	Mola_mola
ENSGMOG00000013146	tsen54	99	44.262	ENSMODG00000007438	TSEN54	79	44.262	Monodelphis_domestica
ENSGMOG00000013146	tsen54	99	56.771	ENSMALG00000020573	tsen54	80	56.771	Monopterus_albus
ENSGMOG00000013146	tsen54	92	46.429	MGP_CAROLIEiJ_G0017417	Tsen54	76	46.429	Mus_caroli
ENSGMOG00000013146	tsen54	92	46.429	ENSMUSG00000020781	Tsen54	76	46.429	Mus_musculus
ENSGMOG00000013146	tsen54	92	46.429	MGP_PahariEiJ_G0018547	Tsen54	76	46.429	Mus_pahari
ENSGMOG00000013146	tsen54	92	46.429	MGP_SPRETEiJ_G0018262	Tsen54	76	46.429	Mus_spretus
ENSGMOG00000013146	tsen54	81	45.455	ENSMPUG00000013870	TSEN54	74	45.455	Mustela_putorius_furo
ENSGMOG00000013146	tsen54	94	43.023	ENSMLUG00000015298	TSEN54	82	43.348	Myotis_lucifugus
ENSGMOG00000013146	tsen54	93	46.429	ENSNGAG00000015673	Tsen54	77	46.429	Nannospalax_galili
ENSGMOG00000013146	tsen54	81	44.444	ENSMEUG00000011908	TSEN54	76	44.444	Notamacropus_eugenii
ENSGMOG00000013146	tsen54	99	41.631	ENSOPRG00000012513	TSEN54	87	41.631	Ochotona_princeps
ENSGMOG00000013146	tsen54	99	55.838	ENSONIG00000009543	tsen54	83	55.838	Oreochromis_niloticus
ENSGMOG00000013146	tsen54	94	42.424	ENSOCUG00000009875	TSEN54	81	41.991	Oryctolagus_cuniculus
ENSGMOG00000013146	tsen54	99	46.862	ENSORLG00000000852	tsen54	96	46.497	Oryzias_latipes
ENSGMOG00000013146	tsen54	97	55.495	ENSORLG00020018221	tsen54	96	45.816	Oryzias_latipes_hni
ENSGMOG00000013146	tsen54	99	46.653	ENSORLG00015009413	tsen54	97	45.397	Oryzias_latipes_hsok
ENSGMOG00000013146	tsen54	99	47.468	ENSOMEG00000014402	tsen54	94	46.624	Oryzias_melastigma
ENSGMOG00000013146	tsen54	92	45.509	ENSOGAG00000001442	TSEN54	78	45.509	Otolemur_garnettii
ENSGMOG00000013146	tsen54	81	49.515	ENSOARG00000010361	TSEN54	73	50.000	Ovis_aries
ENSGMOG00000013146	tsen54	96	41.875	ENSPPAG00000043519	TSEN54	93	38.760	Pan_paniscus
ENSGMOG00000013146	tsen54	82	46.429	ENSPPRG00000009162	TSEN54	79	44.724	Panthera_pardus
ENSGMOG00000013146	tsen54	67	52.747	ENSPTIG00000019312	TSEN54	73	49.558	Panthera_tigris_altaica
ENSGMOG00000013146	tsen54	99	45.029	ENSPTRG00000009646	TSEN54	90	39.726	Pan_troglodytes
ENSGMOG00000013146	tsen54	98	45.570	ENSPANG00000020133	TSEN54	87	41.633	Papio_anubis
ENSGMOG00000013146	tsen54	95	52.018	ENSPKIG00000023018	tsen54	78	60.396	Paramormyrops_kingsleyae
ENSGMOG00000013146	tsen54	80	50.980	ENSPSIG00000012807	TSEN54	78	50.980	Pelodiscus_sinensis
ENSGMOG00000013146	tsen54	91	54.615	ENSPMGG00000019578	tsen54	76	59.259	Periophthalmus_magnuspinnatus
ENSGMOG00000013146	tsen54	92	45.238	ENSPEMG00000014857	Tsen54	76	45.238	Peromyscus_maniculatus_bairdii
ENSGMOG00000013146	tsen54	99	59.896	ENSPFOG00000022740	tsen54	84	59.896	Poecilia_formosa
ENSGMOG00000013146	tsen54	99	59.375	ENSPLAG00000014847	tsen54	84	59.375	Poecilia_latipinna
ENSGMOG00000013146	tsen54	99	59.896	ENSPMEG00000022876	tsen54	84	59.896	Poecilia_mexicana
ENSGMOG00000013146	tsen54	97	61.749	ENSPREG00000013090	tsen54	83	61.749	Poecilia_reticulata
ENSGMOG00000013146	tsen54	91	37.500	ENSPPYG00000008629	TSEN54	99	37.500	Pongo_abelii
ENSGMOG00000013146	tsen54	86	47.407	ENSPCAG00000002093	TSEN54	70	47.407	Procavia_capensis
ENSGMOG00000013146	tsen54	82	46.429	ENSPCOG00000027880	TSEN54	82	45.226	Propithecus_coquereli
ENSGMOG00000013146	tsen54	82	45.833	ENSPVAG00000008446	TSEN54	75	45.833	Pteropus_vampyrus
ENSGMOG00000013146	tsen54	95	54.494	ENSPNYG00000010217	tsen54	99	44.361	Pundamilia_nyererei
ENSGMOG00000013146	tsen54	99	50.000	ENSPNAG00000003770	tsen54	86	50.000	Pygocentrus_nattereri
ENSGMOG00000013146	tsen54	99	46.429	ENSRNOG00000004598	Tsen54	81	46.429	Rattus_norvegicus
ENSGMOG00000013146	tsen54	99	44.324	ENSRBIG00000043040	TSEN54	90	39.922	Rhinopithecus_bieti
ENSGMOG00000013146	tsen54	99	44.324	ENSRROG00000030797	TSEN54	90	39.922	Rhinopithecus_roxellana
ENSGMOG00000013146	tsen54	95	51.333	ENSSBOG00000013543	TSEN54	87	43.781	Saimiri_boliviensis_boliviensis
ENSGMOG00000013146	tsen54	99	40.952	ENSSHAG00000018127	TSEN54	83	40.952	Sarcophilus_harrisii
ENSGMOG00000013146	tsen54	83	56.436	ENSSFOG00015004093	tsen54	82	56.436	Scleropages_formosus
ENSGMOG00000013146	tsen54	96	60.440	ENSSMAG00000012449	tsen54	76	66.355	Scophthalmus_maximus
ENSGMOG00000013146	tsen54	99	57.812	ENSSDUG00000021506	tsen54	82	57.812	Seriola_dumerili
ENSGMOG00000013146	tsen54	99	58.333	ENSSLDG00000016303	tsen54	82	58.333	Seriola_lalandi_dorsalis
ENSGMOG00000013146	tsen54	73	46.857	ENSSPUG00000008988	TSEN54	71	46.857	Sphenodon_punctatus
ENSGMOG00000013146	tsen54	83	53.535	ENSSPAG00000008047	tsen54	84	53.535	Stegastes_partitus
ENSGMOG00000013146	tsen54	93	55.090	ENSSPAG00000008098	-	85	55.090	Stegastes_partitus
ENSGMOG00000013146	tsen54	80	46.061	ENSSSCG00000036852	TSEN54	75	46.061	Sus_scrofa
ENSGMOG00000013146	tsen54	87	48.276	ENSTGUG00000008548	TSEN54	79	48.276	Taeniopygia_guttata
ENSGMOG00000013146	tsen54	99	48.330	ENSTRUG00000004230	tsen54	96	48.330	Takifugu_rubripes
ENSGMOG00000013146	tsen54	99	57.627	ENSTNIG00000011281	tsen54	86	57.447	Tetraodon_nigroviridis
ENSGMOG00000013146	tsen54	70	48.544	ENSTTRG00000015828	TSEN54	77	47.788	Tursiops_truncatus
ENSGMOG00000013146	tsen54	73	45.133	ENSUAMG00000010045	TSEN54	78	45.133	Ursus_americanus
ENSGMOG00000013146	tsen54	67	51.648	ENSUMAG00000008979	TSEN54	77	47.899	Ursus_maritimus
ENSGMOG00000013146	tsen54	91	46.061	ENSVVUG00000011411	TSEN54	75	46.061	Vulpes_vulpes
ENSGMOG00000013146	tsen54	99	39.256	ENSXETG00000012532	tsen54	98	43.750	Xenopus_tropicalis
ENSGMOG00000013146	tsen54	83	63.158	ENSXCOG00000018245	tsen54	84	63.158	Xiphophorus_couchianus
ENSGMOG00000013146	tsen54	99	59.896	ENSXMAG00000018818	tsen54	84	59.896	Xiphophorus_maculatus