EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000013223 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 7739 bases
Position: chrGeneScaffold_2707:1435-9173
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014151	TRM13	PF05206.14	8.7e-75	1	2
ENSGMOP00000014151	TRM13	PF05206.14	8.7e-75	2	2
ENSGMOP00000014151	zf-U11-48K	PF05253.12	3.5e-10	1	1
ENSGMOP00000014151	zf-TRM13_CCCH	PF11722.8	3.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014516	-	1143	-	ENSGMOP00000014151	381 (aa)	-	UPI00023F3079

Gene Model

Click here to download ENSGMOG00000013223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013223	trmt13	100	49.451	ENSG00000122435	TRMT13	96	48.507	Homo_sapiens
ENSGMOG00000013223	trmt13	100	50.932	ENSAPOG00000015131	trmt13	98	51.357	Acanthochromis_polyacanthus
ENSGMOG00000013223	trmt13	100	49.451	ENSAMEG00000008917	TRMT13	95	49.011	Ailuropoda_melanoleuca
ENSGMOG00000013223	trmt13	100	54.425	ENSACIG00000005804	trmt13	94	54.098	Amphilophus_citrinellus
ENSGMOG00000013223	trmt13	100	50.725	ENSAOCG00000023585	trmt13	98	50.104	Amphiprion_ocellaris
ENSGMOG00000013223	trmt13	100	51.148	ENSAPEG00000004025	trmt13	98	51.148	Amphiprion_percula
ENSGMOG00000013223	trmt13	100	55.457	ENSATEG00000006597	trmt13	95	55.679	Anabas_testudineus
ENSGMOG00000013223	trmt13	91	50.600	ENSAPLG00000014924	TRMT13	98	50.600	Anas_platyrhynchos
ENSGMOG00000013223	trmt13	100	50.000	ENSACAG00000003498	TRMT13	97	49.779	Anolis_carolinensis
ENSGMOG00000013223	trmt13	100	49.231	ENSANAG00000019525	TRMT13	95	48.791	Aotus_nancymaae
ENSGMOG00000013223	trmt13	99	57.471	ENSACLG00000020018	trmt13	97	57.407	Astatotilapia_calliptera
ENSGMOG00000013223	trmt13	100	53.744	ENSAMXG00000017963	trmt13	97	53.524	Astyanax_mexicanus
ENSGMOG00000013223	trmt13	100	49.011	ENSBTAG00000015781	TRMT13	95	48.571	Bos_taurus
ENSGMOG00000013223	trmt13	100	49.779	ENSCJAG00000000200	TRMT13	89	63.359	Callithrix_jacchus
ENSGMOG00000013223	trmt13	65	47.869	ENSCAFG00000020021	TRMT13	96	47.213	Canis_familiaris
ENSGMOG00000013223	trmt13	62	56.641	ENSCAFG00020011572	TRMT13	89	56.641	Canis_lupus_dingo
ENSGMOG00000013223	trmt13	100	49.011	ENSCHIG00000015395	TRMT13	95	48.571	Capra_hircus
ENSGMOG00000013223	trmt13	100	49.561	ENSTSYG00000010811	TRMT13	84	65.882	Carlito_syrichta
ENSGMOG00000013223	trmt13	76	44.737	ENSCAPG00000009085	TRMT13	86	43.092	Cavia_aperea
ENSGMOG00000013223	trmt13	100	49.779	ENSCPOG00000000694	TRMT13	95	49.336	Cavia_porcellus
ENSGMOG00000013223	trmt13	100	49.451	ENSCCAG00000023772	TRMT13	95	49.011	Cebus_capucinus
ENSGMOG00000013223	trmt13	100	49.670	ENSCATG00000033556	TRMT13	95	49.231	Cercocebus_atys
ENSGMOG00000013223	trmt13	90	49.878	ENSCLAG00000008220	TRMT13	98	49.633	Chinchilla_lanigera
ENSGMOG00000013223	trmt13	100	49.451	ENSCSAG00000001506	TRMT13	95	49.011	Chlorocebus_sabaeus
ENSGMOG00000013223	trmt13	100	50.794	ENSCPBG00000026671	TRMT13	95	50.221	Chrysemys_picta_bellii
ENSGMOG00000013223	trmt13	100	49.451	ENSCANG00000034659	TRMT13	95	49.011	Colobus_angolensis_palliatus
ENSGMOG00000013223	trmt13	100	49.890	ENSCGRG00001021601	Trmt13	94	49.451	Cricetulus_griseus_chok1gshd
ENSGMOG00000013223	trmt13	50	44.355	ENSCGRG00000000093	-	96	43.548	Cricetulus_griseus_crigri
ENSGMOG00000013223	trmt13	99	57.178	ENSCSEG00000000591	trmt13	96	57.178	Cynoglossus_semilaevis
ENSGMOG00000013223	trmt13	100	52.193	ENSCVAG00000017342	trmt13	92	52.193	Cyprinodon_variegatus
ENSGMOG00000013223	trmt13	100	54.649	ENSDARG00000102846	trmt13	95	54.422	Danio_rerio
ENSGMOG00000013223	trmt13	62	55.985	ENSDNOG00000001710	TRMT13	79	55.985	Dasypus_novemcinctus
ENSGMOG00000013223	trmt13	100	48.352	ENSDORG00000015808	Trmt13	94	47.912	Dipodomys_ordii
ENSGMOG00000013223	trmt13	99	32.273	FBgn0037435	CG18048	93	32.500	Drosophila_melanogaster
ENSGMOG00000013223	trmt13	100	44.662	ENSETEG00000005819	TRMT13	95	44.227	Echinops_telfairi
ENSGMOG00000013223	trmt13	99	44.270	ENSEBUG00000014444	trmt13	96	44.671	Eptatretus_burgeri
ENSGMOG00000013223	trmt13	100	48.791	ENSEASG00005015918	TRMT13	95	48.352	Equus_asinus_asinus
ENSGMOG00000013223	trmt13	100	48.791	ENSECAG00000022626	TRMT13	95	48.352	Equus_caballus
ENSGMOG00000013223	trmt13	79	60.377	ENSEEUG00000000294	TRMT13	67	60.377	Erinaceus_europaeus
ENSGMOG00000013223	trmt13	100	55.752	ENSELUG00000003803	trmt13	96	54.585	Esox_lucius
ENSGMOG00000013223	trmt13	100	49.011	ENSFCAG00000030618	TRMT13	96	48.507	Felis_catus
ENSGMOG00000013223	trmt13	100	51.316	ENSFALG00000002424	TRMT13	95	52.455	Ficedula_albicollis
ENSGMOG00000013223	trmt13	100	49.231	ENSFDAG00000006342	TRMT13	94	48.791	Fukomys_damarensis
ENSGMOG00000013223	trmt13	86	58.177	ENSFHEG00000022954	trmt13	90	59.890	Fundulus_heteroclitus
ENSGMOG00000013223	trmt13	99	49.336	ENSGALG00000005290	TRMT13	95	49.889	Gallus_gallus
ENSGMOG00000013223	trmt13	85	57.102	ENSGAFG00000001577	trmt13	79	57.102	Gambusia_affinis
ENSGMOG00000013223	trmt13	100	57.370	ENSGACG00000013428	trmt13	96	57.596	Gasterosteus_aculeatus
ENSGMOG00000013223	trmt13	100	49.672	ENSGAGG00000023303	TRMT13	94	58.527	Gopherus_agassizii
ENSGMOG00000013223	trmt13	100	49.011	ENSGGOG00000005616	TRMT13	95	48.571	Gorilla_gorilla
ENSGMOG00000013223	trmt13	99	57.471	ENSHBUG00000007754	trmt13	97	57.241	Haplochromis_burtoni
ENSGMOG00000013223	trmt13	100	48.791	ENSHGLG00000002164	TRMT13	94	48.791	Heterocephalus_glaber_female
ENSGMOG00000013223	trmt13	100	48.791	ENSHGLG00100001618	TRMT13	94	48.791	Heterocephalus_glaber_male
ENSGMOG00000013223	trmt13	100	51.090	ENSHCOG00000020553	trmt13	96	51.325	Hippocampus_comes
ENSGMOG00000013223	trmt13	100	54.299	ENSIPUG00000024787	trmt13	97	54.299	Ictalurus_punctatus
ENSGMOG00000013223	trmt13	100	48.791	ENSSTOG00000013483	TRMT13	95	48.352	Ictidomys_tridecemlineatus
ENSGMOG00000013223	trmt13	100	48.791	ENSJJAG00000018012	Trmt13	95	48.352	Jaculus_jaculus
ENSGMOG00000013223	trmt13	70	51.592	ENSKMAG00000007639	trmt13	98	52.117	Kryptolebias_marmoratus
ENSGMOG00000013223	trmt13	100	53.780	ENSLBEG00000020238	trmt13	98	54.585	Labrus_bergylta
ENSGMOG00000013223	trmt13	99	51.441	ENSLACG00000013153	TRMT13	99	49.235	Latimeria_chalumnae
ENSGMOG00000013223	trmt13	100	52.550	ENSLOCG00000000418	trmt13	96	52.809	Lepisosteus_oculatus
ENSGMOG00000013223	trmt13	77	48.459	ENSLAFG00000002383	TRMT13	96	47.899	Loxodonta_africana
ENSGMOG00000013223	trmt13	100	49.451	ENSMFAG00000034681	TRMT13	95	49.011	Macaca_fascicularis
ENSGMOG00000013223	trmt13	100	49.451	ENSMMUG00000004243	TRMT13	95	49.011	Macaca_mulatta
ENSGMOG00000013223	trmt13	100	49.451	ENSMNEG00000036102	TRMT13	95	49.011	Macaca_nemestrina
ENSGMOG00000013223	trmt13	100	49.231	ENSMLEG00000034258	TRMT13	95	48.791	Mandrillus_leucophaeus
ENSGMOG00000013223	trmt13	100	56.600	ENSMAMG00000016597	trmt13	95	55.481	Mastacembelus_armatus
ENSGMOG00000013223	trmt13	99	57.471	ENSMZEG00005020959	trmt13	97	57.407	Maylandia_zebra
ENSGMOG00000013223	trmt13	91	49.881	ENSMGAG00000006970	TRMT13	98	49.880	Meleagris_gallopavo
ENSGMOG00000013223	trmt13	100	50.330	ENSMAUG00000010448	Trmt13	94	49.670	Mesocricetus_auratus
ENSGMOG00000013223	trmt13	100	49.231	ENSMICG00000005283	TRMT13	95	48.791	Microcebus_murinus
ENSGMOG00000013223	trmt13	100	49.451	ENSMOCG00000019914	Trmt13	95	49.231	Microtus_ochrogaster
ENSGMOG00000013223	trmt13	62	55.078	ENSMMOG00000007762	trmt13	88	55.078	Mola_mola
ENSGMOG00000013223	trmt13	100	48.052	ENSMODG00000003646	TRMT13	95	48.472	Monodelphis_domestica
ENSGMOG00000013223	trmt13	100	57.482	ENSMALG00000020965	trmt13	95	56.635	Monopterus_albus
ENSGMOG00000013223	trmt13	100	50.220	MGP_CAROLIEiJ_G0025568	Trmt13	94	55.952	Mus_caroli
ENSGMOG00000013223	trmt13	100	50.220	ENSMUSG00000033439	Trmt13	94	55.952	Mus_musculus
ENSGMOG00000013223	trmt13	100	50.000	MGP_PahariEiJ_G0027014	Trmt13	76	72.917	Mus_pahari
ENSGMOG00000013223	trmt13	100	50.220	MGP_SPRETEiJ_G0026518	Trmt13	94	55.952	Mus_spretus
ENSGMOG00000013223	trmt13	77	49.415	ENSMPUG00000002078	-	93	48.830	Mustela_putorius_furo
ENSGMOG00000013223	trmt13	100	49.127	ENSMLUG00000002124	TRMT13	95	48.791	Myotis_lucifugus
ENSGMOG00000013223	trmt13	99	54.147	ENSNBRG00000006783	trmt13	95	53.953	Neolamprologus_brichardi
ENSGMOG00000013223	trmt13	100	49.231	ENSNLEG00000035917	TRMT13	95	48.791	Nomascus_leucogenys
ENSGMOG00000013223	trmt13	55	48.261	ENSMEUG00000013346	-	93	48.261	Notamacropus_eugenii
ENSGMOG00000013223	trmt13	73	70.000	ENSOPRG00000012048	TRMT13	62	70.000	Ochotona_princeps
ENSGMOG00000013223	trmt13	100	56.651	ENSONIG00000004574	trmt13	97	56.422	Oreochromis_niloticus
ENSGMOG00000013223	trmt13	91	50.831	ENSOANG00000012057	TRMT13	97	50.831	Ornithorhynchus_anatinus
ENSGMOG00000013223	trmt13	100	49.780	ENSOCUG00000023095	TRMT13	95	49.339	Oryctolagus_cuniculus
ENSGMOG00000013223	trmt13	99	50.780	ENSORLG00000003320	trmt13	97	50.441	Oryzias_latipes
ENSGMOG00000013223	trmt13	99	52.448	ENSORLG00020005972	trmt13	96	52.448	Oryzias_latipes_hni
ENSGMOG00000013223	trmt13	99	55.405	ENSORLG00015002270	trmt13	97	55.180	Oryzias_latipes_hsok
ENSGMOG00000013223	trmt13	99	55.430	ENSOMEG00000006724	trmt13	92	55.430	Oryzias_melastigma
ENSGMOG00000013223	trmt13	100	49.011	ENSOGAG00000005618	TRMT13	92	48.571	Otolemur_garnettii
ENSGMOG00000013223	trmt13	100	49.011	ENSOARG00000017983	TRMT13	95	48.571	Ovis_aries
ENSGMOG00000013223	trmt13	100	49.231	ENSPPAG00000043736	TRMT13	95	48.791	Pan_paniscus
ENSGMOG00000013223	trmt13	100	49.011	ENSPPRG00000003424	TRMT13	96	48.507	Panthera_pardus
ENSGMOG00000013223	trmt13	100	49.011	ENSPTIG00000018598	TRMT13	96	48.507	Panthera_tigris_altaica
ENSGMOG00000013223	trmt13	100	49.451	ENSPTRG00000001001	TRMT13	95	49.011	Pan_troglodytes
ENSGMOG00000013223	trmt13	100	49.451	ENSPANG00000007598	TRMT13	95	49.011	Papio_anubis
ENSGMOG00000013223	trmt13	100	55.708	ENSPKIG00000001514	trmt13	96	55.023	Paramormyrops_kingsleyae
ENSGMOG00000013223	trmt13	90	48.804	ENSPSIG00000012703	TRMT13	99	48.551	Pelodiscus_sinensis
ENSGMOG00000013223	trmt13	99	54.930	ENSPMGG00000013298	trmt13	92	54.610	Periophthalmus_magnuspinnatus
ENSGMOG00000013223	trmt13	100	50.110	ENSPEMG00000000275	Trmt13	95	49.890	Peromyscus_maniculatus_bairdii
ENSGMOG00000013223	trmt13	99	43.683	ENSPMAG00000000823	trmt13	97	43.534	Petromyzon_marinus
ENSGMOG00000013223	trmt13	100	48.359	ENSPCIG00000007699	TRMT13	95	48.578	Phascolarctos_cinereus
ENSGMOG00000013223	trmt13	99	54.273	ENSPFOG00000008675	trmt13	94	53.547	Poecilia_formosa
ENSGMOG00000013223	trmt13	99	52.809	ENSPLAG00000009709	trmt13	98	52.116	Poecilia_latipinna
ENSGMOG00000013223	trmt13	99	52.928	ENSPMEG00000022954	trmt13	98	52.009	Poecilia_mexicana
ENSGMOG00000013223	trmt13	85	58.523	ENSPREG00000005645	trmt13	90	58.915	Poecilia_reticulata
ENSGMOG00000013223	trmt13	100	49.231	ENSPPYG00000001120	TRMT13	95	48.791	Pongo_abelii
ENSGMOG00000013223	trmt13	100	49.779	ENSPCAG00000002340	TRMT13	95	49.336	Procavia_capensis
ENSGMOG00000013223	trmt13	100	49.231	ENSPCOG00000017984	TRMT13	95	48.791	Propithecus_coquereli
ENSGMOG00000013223	trmt13	100	48.352	ENSPVAG00000017430	TRMT13	95	47.912	Pteropus_vampyrus
ENSGMOG00000013223	trmt13	99	55.944	ENSPNYG00000013690	trmt13	97	55.634	Pundamilia_nyererei
ENSGMOG00000013223	trmt13	100	54.911	ENSPNAG00000022130	trmt13	97	54.911	Pygocentrus_nattereri
ENSGMOG00000013223	trmt13	100	49.780	ENSRNOG00000015140	Trmt13	92	49.339	Rattus_norvegicus
ENSGMOG00000013223	trmt13	100	49.451	ENSRBIG00000037686	TRMT13	95	49.011	Rhinopithecus_bieti
ENSGMOG00000013223	trmt13	100	49.451	ENSRROG00000044057	TRMT13	95	49.011	Rhinopithecus_roxellana
ENSGMOG00000013223	trmt13	100	49.670	ENSSBOG00000026541	TRMT13	95	49.231	Saimiri_boliviensis_boliviensis
ENSGMOG00000013223	trmt13	94	47.465	ENSSHAG00000005213	TRMT13	96	47.674	Sarcophilus_harrisii
ENSGMOG00000013223	trmt13	100	56.492	ENSSFOG00015017560	trmt13	96	56.492	Scleropages_formosus
ENSGMOG00000013223	trmt13	100	53.097	ENSSMAG00000014592	trmt13	95	52.434	Scophthalmus_maximus
ENSGMOG00000013223	trmt13	100	54.803	ENSSDUG00000015508	trmt13	94	54.585	Seriola_dumerili
ENSGMOG00000013223	trmt13	100	54.803	ENSSLDG00000019060	trmt13	95	53.696	Seriola_lalandi_dorsalis
ENSGMOG00000013223	trmt13	100	44.396	ENSSARG00000010344	TRMT13	96	43.736	Sorex_araneus
ENSGMOG00000013223	trmt13	99	50.000	ENSSPUG00000016339	TRMT13	98	49.333	Sphenodon_punctatus
ENSGMOG00000013223	trmt13	100	54.586	ENSSPAG00000011922	trmt13	97	54.362	Stegastes_partitus
ENSGMOG00000013223	trmt13	100	49.663	ENSSSCG00000006869	TRMT13	95	49.011	Sus_scrofa
ENSGMOG00000013223	trmt13	100	51.096	ENSTGUG00000005253	TRMT13	97	51.562	Taeniopygia_guttata
ENSGMOG00000013223	trmt13	99	52.928	ENSTRUG00000008400	trmt13	96	52.915	Takifugu_rubripes
ENSGMOG00000013223	trmt13	64	53.165	ENSTBEG00000008911	TRMT13	75	53.165	Tupaia_belangeri
ENSGMOG00000013223	trmt13	100	50.227	ENSUAMG00000017251	TRMT13	94	49.773	Ursus_americanus
ENSGMOG00000013223	trmt13	100	49.451	ENSUMAG00000007901	TRMT13	97	48.571	Ursus_maritimus
ENSGMOG00000013223	trmt13	79	72.000	ENSVPAG00000001034	TRMT13	83	72.000	Vicugna_pacos
ENSGMOG00000013223	trmt13	100	49.451	ENSVVUG00000021996	TRMT13	94	49.011	Vulpes_vulpes
ENSGMOG00000013223	trmt13	100	50.112	ENSXETG00000013204	trmt13	96	50.572	Xenopus_tropicalis
ENSGMOG00000013223	trmt13	99	52.135	ENSXMAG00000010765	trmt13	98	52.222	Xiphophorus_maculatus