EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000013436 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 21026 bases
Position: chrGeneScaffold_2336:21854-42879
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014375	XRN_N	PF03159.18	2.9e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014745	-	2394	-	ENSGMOP00000014375	798 (aa)	-	UPI00023F2D17

Gene Model

Click here to download ENSGMOG00000013436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013436	xrn2	100	72.661	ENSG00000088930	XRN2	86	72.661	Homo_sapiens
ENSGMOG00000013436	xrn2	100	80.579	ENSAPOG00000009818	xrn2	85	80.579	Acanthochromis_polyacanthus
ENSGMOG00000013436	xrn2	100	73.026	ENSAMEG00000012581	XRN2	86	73.026	Ailuropoda_melanoleuca
ENSGMOG00000013436	xrn2	100	75.899	ENSACIG00000015047	xrn2	99	74.101	Amphilophus_citrinellus
ENSGMOG00000013436	xrn2	100	80.820	ENSAOCG00000023632	xrn2	85	80.820	Amphiprion_ocellaris
ENSGMOG00000013436	xrn2	100	80.700	ENSAPEG00000014871	xrn2	85	80.700	Amphiprion_percula
ENSGMOG00000013436	xrn2	100	81.032	ENSATEG00000001273	xrn2	86	81.032	Anabas_testudineus
ENSGMOG00000013436	xrn2	97	74.593	ENSAPLG00000013869	XRN2	86	74.593	Anas_platyrhynchos
ENSGMOG00000013436	xrn2	100	73.245	ENSACAG00000005565	XRN2	86	73.245	Anolis_carolinensis
ENSGMOG00000013436	xrn2	100	72.539	ENSANAG00000020126	XRN2	86	72.539	Aotus_nancymaae
ENSGMOG00000013436	xrn2	100	78.313	ENSACLG00000010522	xrn2	95	76.967	Astatotilapia_calliptera
ENSGMOG00000013436	xrn2	100	81.993	ENSAMXG00000018301	xrn2	86	81.993	Astyanax_mexicanus
ENSGMOG00000013436	xrn2	100	72.539	ENSBTAG00000011304	XRN2	86	72.539	Bos_taurus
ENSGMOG00000013436	xrn2	100	52.644	WBGene00006964	xrn-2	87	52.526	Caenorhabditis_elegans
ENSGMOG00000013436	xrn2	100	72.661	ENSCJAG00000005611	XRN2	86	72.661	Callithrix_jacchus
ENSGMOG00000013436	xrn2	100	72.904	ENSCAFG00000005185	XRN2	86	72.904	Canis_familiaris
ENSGMOG00000013436	xrn2	100	72.904	ENSCAFG00020027479	XRN2	86	72.904	Canis_lupus_dingo
ENSGMOG00000013436	xrn2	100	72.539	ENSCHIG00000006921	XRN2	86	72.539	Capra_hircus
ENSGMOG00000013436	xrn2	100	72.628	ENSTSYG00000008315	XRN2	86	72.628	Carlito_syrichta
ENSGMOG00000013436	xrn2	97	62.516	ENSCAPG00000010773	XRN2	84	63.368	Cavia_aperea
ENSGMOG00000013436	xrn2	100	73.269	ENSCPOG00000009407	XRN2	86	73.269	Cavia_porcellus
ENSGMOG00000013436	xrn2	100	72.661	ENSCATG00000040350	XRN2	87	72.661	Cercocebus_atys
ENSGMOG00000013436	xrn2	100	73.147	ENSCLAG00000013419	XRN2	86	73.147	Chinchilla_lanigera
ENSGMOG00000013436	xrn2	100	72.661	ENSCSAG00000011094	XRN2	86	72.661	Chlorocebus_sabaeus
ENSGMOG00000013436	xrn2	70	86.559	ENSCHOG00000013404	XRN2	63	86.559	Choloepus_hoffmanni
ENSGMOG00000013436	xrn2	100	74.667	ENSCPBG00000023533	XRN2	86	74.667	Chrysemys_picta_bellii
ENSGMOG00000013436	xrn2	99	57.674	ENSCING00000022336	-	100	58.273	Ciona_intestinalis
ENSGMOG00000013436	xrn2	100	59.108	ENSCSAVG00000011217	-	100	64.811	Ciona_savignyi
ENSGMOG00000013436	xrn2	100	72.661	ENSCANG00000040240	XRN2	86	72.661	Colobus_angolensis_palliatus
ENSGMOG00000013436	xrn2	100	73.325	ENSCGRG00001010676	Xrn2	88	73.325	Cricetulus_griseus_chok1gshd
ENSGMOG00000013436	xrn2	97	72.487	ENSCGRG00000006378	Xrn2	85	72.487	Cricetulus_griseus_crigri
ENSGMOG00000013436	xrn2	61	76.938	ENSCSEG00000005628	xrn2	100	76.938	Cynoglossus_semilaevis
ENSGMOG00000013436	xrn2	100	77.671	ENSCVAG00000018999	xrn2	87	87.179	Cyprinodon_variegatus
ENSGMOG00000013436	xrn2	100	82.048	ENSDARG00000101900	xrn2	87	89.126	Danio_rerio
ENSGMOG00000013436	xrn2	100	73.147	ENSDNOG00000001895	XRN2	86	73.147	Dasypus_novemcinctus
ENSGMOG00000013436	xrn2	100	71.932	ENSDORG00000005434	Xrn2	86	71.932	Dipodomys_ordii
ENSGMOG00000013436	xrn2	100	56.180	FBgn0031868	Rat1	87	56.055	Drosophila_melanogaster
ENSGMOG00000013436	xrn2	92	79.075	ENSETEG00000001740	XRN2	77	79.075	Echinops_telfairi
ENSGMOG00000013436	xrn2	98	67.394	ENSEBUG00000016136	xrn2	100	67.394	Eptatretus_burgeri
ENSGMOG00000013436	xrn2	100	73.390	ENSEASG00005002484	XRN2	86	73.390	Equus_asinus_asinus
ENSGMOG00000013436	xrn2	93	84.000	ENSECAG00000018988	XRN2	82	84.000	Equus_caballus
ENSGMOG00000013436	xrn2	77	84.000	ENSEEUG00000009265	XRN2	67	84.000	Erinaceus_europaeus
ENSGMOG00000013436	xrn2	100	85.557	ENSELUG00000000552	xrn2	84	85.557	Esox_lucius
ENSGMOG00000013436	xrn2	100	72.783	ENSFCAG00000007970	XRN2	86	72.783	Felis_catus
ENSGMOG00000013436	xrn2	100	75.152	ENSFALG00000004508	XRN2	86	75.152	Ficedula_albicollis
ENSGMOG00000013436	xrn2	100	73.269	ENSFDAG00000016311	XRN2	86	73.269	Fukomys_damarensis
ENSGMOG00000013436	xrn2	61	73.563	ENSFHEG00000013039	xrn2	98	73.563	Fundulus_heteroclitus
ENSGMOG00000013436	xrn2	100	74.818	ENSGALG00000008372	XRN2	86	74.818	Gallus_gallus
ENSGMOG00000013436	xrn2	100	80.168	ENSGAFG00000014284	xrn2	92	84.672	Gambusia_affinis
ENSGMOG00000013436	xrn2	100	85.750	ENSGACG00000011870	xrn2	99	85.750	Gasterosteus_aculeatus
ENSGMOG00000013436	xrn2	100	74.545	ENSGAGG00000004884	XRN2	86	74.545	Gopherus_agassizii
ENSGMOG00000013436	xrn2	100	72.661	ENSGGOG00000013738	XRN2	86	72.661	Gorilla_gorilla
ENSGMOG00000013436	xrn2	61	76.967	ENSHBUG00000005077	xrn2	95	76.967	Haplochromis_burtoni
ENSGMOG00000013436	xrn2	100	72.175	ENSHGLG00000014831	XRN2	86	72.175	Heterocephalus_glaber_female
ENSGMOG00000013436	xrn2	100	72.175	ENSHGLG00100013130	XRN2	86	72.175	Heterocephalus_glaber_male
ENSGMOG00000013436	xrn2	100	80.579	ENSHCOG00000011994	xrn2	90	77.954	Hippocampus_comes
ENSGMOG00000013436	xrn2	100	79.832	ENSIPUG00000006639	xrn2	86	79.832	Ictalurus_punctatus
ENSGMOG00000013436	xrn2	100	73.026	ENSSTOG00000000589	XRN2	86	73.026	Ictidomys_tridecemlineatus
ENSGMOG00000013436	xrn2	100	73.147	ENSJJAG00000022128	Xrn2	86	73.147	Jaculus_jaculus
ENSGMOG00000013436	xrn2	61	86.481	ENSLBEG00000010041	xrn2	100	86.481	Labrus_bergylta
ENSGMOG00000013436	xrn2	98	72.503	ENSLACG00000008307	XRN2	97	72.195	Latimeria_chalumnae
ENSGMOG00000013436	xrn2	100	77.859	ENSLOCG00000016874	xrn2	91	77.763	Lepisosteus_oculatus
ENSGMOG00000013436	xrn2	100	73.147	ENSLAFG00000014624	XRN2	86	73.147	Loxodonta_africana
ENSGMOG00000013436	xrn2	100	72.661	ENSMFAG00000038122	XRN2	86	72.661	Macaca_fascicularis
ENSGMOG00000013436	xrn2	100	72.661	ENSMMUG00000011405	XRN2	86	72.661	Macaca_mulatta
ENSGMOG00000013436	xrn2	100	72.539	ENSMNEG00000040626	XRN2	86	72.539	Macaca_nemestrina
ENSGMOG00000013436	xrn2	100	72.539	ENSMLEG00000041897	XRN2	86	72.539	Mandrillus_leucophaeus
ENSGMOG00000013436	xrn2	100	82.029	ENSMAMG00000008633	xrn2	85	82.029	Mastacembelus_armatus
ENSGMOG00000013436	xrn2	100	80.241	ENSMZEG00005022362	xrn2	93	80.241	Maylandia_zebra
ENSGMOG00000013436	xrn2	100	74.213	ENSMGAG00000003196	XRN2	86	74.213	Meleagris_gallopavo
ENSGMOG00000013436	xrn2	100	73.447	ENSMAUG00000021842	Xrn2	86	73.447	Mesocricetus_auratus
ENSGMOG00000013436	xrn2	100	72.904	ENSMICG00000008126	XRN2	86	72.904	Microcebus_murinus
ENSGMOG00000013436	xrn2	100	73.147	ENSMOCG00000012588	Xrn2	86	73.147	Microtus_ochrogaster
ENSGMOG00000013436	xrn2	100	80.192	ENSMMOG00000017576	xrn2	91	80.192	Mola_mola
ENSGMOG00000013436	xrn2	100	74.241	ENSMODG00000006163	XRN2	86	74.241	Monodelphis_domestica
ENSGMOG00000013436	xrn2	100	79.712	ENSMALG00000011355	xrn2	85	87.872	Monopterus_albus
ENSGMOG00000013436	xrn2	100	73.390	MGP_CAROLIEiJ_G0024400	Xrn2	86	73.390	Mus_caroli
ENSGMOG00000013436	xrn2	100	73.390	ENSMUSG00000027433	Xrn2	86	73.390	Mus_musculus
ENSGMOG00000013436	xrn2	100	73.269	MGP_PahariEiJ_G0025843	Xrn2	86	73.269	Mus_pahari
ENSGMOG00000013436	xrn2	100	73.390	MGP_SPRETEiJ_G0025318	Xrn2	94	80.645	Mus_spretus
ENSGMOG00000013436	xrn2	100	71.548	ENSMPUG00000001198	XRN2	80	71.548	Mustela_putorius_furo
ENSGMOG00000013436	xrn2	100	73.114	ENSMLUG00000001536	XRN2	86	73.114	Myotis_lucifugus
ENSGMOG00000013436	xrn2	100	73.512	ENSNGAG00000018138	Xrn2	86	73.512	Nannospalax_galili
ENSGMOG00000013436	xrn2	100	79.976	ENSNBRG00000008062	xrn2	93	79.976	Neolamprologus_brichardi
ENSGMOG00000013436	xrn2	100	72.661	ENSNLEG00000009991	XRN2	86	72.661	Nomascus_leucogenys
ENSGMOG00000013436	xrn2	62	82.222	ENSMEUG00000008622	-	53	82.222	Notamacropus_eugenii
ENSGMOG00000013436	xrn2	70	72.105	ENSOPRG00000001397	-	63	72.105	Ochotona_princeps
ENSGMOG00000013436	xrn2	98	67.160	ENSODEG00000000860	-	87	67.037	Octodon_degus
ENSGMOG00000013436	xrn2	100	72.904	ENSODEG00000010745	-	86	72.904	Octodon_degus
ENSGMOG00000013436	xrn2	100	80.779	ENSONIG00000018720	xrn2	85	80.779	Oreochromis_niloticus
ENSGMOG00000013436	xrn2	100	74.362	ENSOANG00000015673	XRN2	86	74.362	Ornithorhynchus_anatinus
ENSGMOG00000013436	xrn2	100	73.147	ENSOCUG00000013468	XRN2	86	73.147	Oryctolagus_cuniculus
ENSGMOG00000013436	xrn2	100	79.472	ENSORLG00000017213	xrn2	93	79.472	Oryzias_latipes
ENSGMOG00000013436	xrn2	100	79.472	ENSORLG00020001824	xrn2	86	79.472	Oryzias_latipes_hni
ENSGMOG00000013436	xrn2	100	79.232	ENSORLG00015019747	xrn2	86	79.232	Oryzias_latipes_hsok
ENSGMOG00000013436	xrn2	100	78.992	ENSOMEG00000019820	xrn2	85	78.992	Oryzias_melastigma
ENSGMOG00000013436	xrn2	100	73.058	ENSOGAG00000001068	XRN2	86	73.058	Otolemur_garnettii
ENSGMOG00000013436	xrn2	97	72.146	ENSOARG00000004443	XRN2	86	72.146	Ovis_aries
ENSGMOG00000013436	xrn2	100	72.661	ENSPPAG00000033549	XRN2	86	72.661	Pan_paniscus
ENSGMOG00000013436	xrn2	100	72.783	ENSPPRG00000008732	XRN2	86	72.783	Panthera_pardus
ENSGMOG00000013436	xrn2	97	72.522	ENSPTIG00000015683	XRN2	83	72.522	Panthera_tigris_altaica
ENSGMOG00000013436	xrn2	100	72.661	ENSPTRG00000013308	XRN2	86	72.661	Pan_troglodytes
ENSGMOG00000013436	xrn2	100	72.661	ENSPANG00000018088	XRN2	86	72.661	Papio_anubis
ENSGMOG00000013436	xrn2	100	79.567	ENSPKIG00000016889	xrn2	85	79.567	Paramormyrops_kingsleyae
ENSGMOG00000013436	xrn2	93	74.060	ENSPSIG00000014666	XRN2	99	74.060	Pelodiscus_sinensis
ENSGMOG00000013436	xrn2	100	72.904	ENSPEMG00000000111	Xrn2	86	72.904	Peromyscus_maniculatus_bairdii
ENSGMOG00000013436	xrn2	100	80.900	ENSPFOG00000004182	xrn2	86	80.900	Poecilia_formosa
ENSGMOG00000013436	xrn2	100	80.048	ENSPLAG00000007351	xrn2	93	80.048	Poecilia_latipinna
ENSGMOG00000013436	xrn2	93	79.177	ENSPMEG00000011798	xrn2	85	79.177	Poecilia_mexicana
ENSGMOG00000013436	xrn2	100	79.688	ENSPREG00000012452	xrn2	93	79.688	Poecilia_reticulata
ENSGMOG00000013436	xrn2	100	72.539	ENSPPYG00000010755	XRN2	86	72.539	Pongo_abelii
ENSGMOG00000013436	xrn2	100	69.380	ENSPCAG00000011191	XRN2	86	69.380	Procavia_capensis
ENSGMOG00000013436	xrn2	100	66.586	ENSPCOG00000016468	XRN2	85	66.586	Propithecus_coquereli
ENSGMOG00000013436	xrn2	91	65.642	ENSPVAG00000004596	XRN2	79	65.642	Pteropus_vampyrus
ENSGMOG00000013436	xrn2	100	78.313	ENSPNYG00000001765	xrn2	93	78.193	Pundamilia_nyererei
ENSGMOG00000013436	xrn2	100	80.312	ENSPNAG00000010956	xrn2	85	80.312	Pygocentrus_nattereri
ENSGMOG00000013436	xrn2	100	73.633	ENSRNOG00000011785	Xrn2	86	73.755	Rattus_norvegicus
ENSGMOG00000013436	xrn2	100	72.661	ENSRBIG00000036193	XRN2	100	72.661	Rhinopithecus_bieti
ENSGMOG00000013436	xrn2	100	72.661	ENSRROG00000044400	XRN2	78	72.661	Rhinopithecus_roxellana
ENSGMOG00000013436	xrn2	83	51.685	YOR048C	RAT1	62	53.753	Saccharomyces_cerevisiae
ENSGMOG00000013436	xrn2	100	72.783	ENSSBOG00000021014	XRN2	86	72.783	Saimiri_boliviensis_boliviensis
ENSGMOG00000013436	xrn2	100	80.649	ENSSFOG00015001091	xrn2	89	78.052	Scleropages_formosus
ENSGMOG00000013436	xrn2	100	82.771	ENSSMAG00000007834	xrn2	84	82.771	Scophthalmus_maximus
ENSGMOG00000013436	xrn2	100	79.257	ENSSDUG00000012802	xrn2	95	78.469	Seriola_dumerili
ENSGMOG00000013436	xrn2	100	82.641	ENSSLDG00000021273	xrn2	93	82.641	Seriola_lalandi_dorsalis
ENSGMOG00000013436	xrn2	59	84.000	ENSSARG00000005859	-	50	84.000	Sorex_araneus
ENSGMOG00000013436	xrn2	100	72.121	ENSSPUG00000005485	XRN2	84	72.121	Sphenodon_punctatus
ENSGMOG00000013436	xrn2	100	81.062	ENSSPAG00000016027	xrn2	85	81.062	Stegastes_partitus
ENSGMOG00000013436	xrn2	100	71.567	ENSSSCG00000007109	XRN2	86	71.567	Sus_scrofa
ENSGMOG00000013436	xrn2	100	73.455	ENSTGUG00000007535	XRN2	86	73.455	Taeniopygia_guttata
ENSGMOG00000013436	xrn2	100	80.807	ENSTRUG00000015489	xrn2	83	81.785	Takifugu_rubripes
ENSGMOG00000013436	xrn2	100	79.512	ENSTNIG00000010712	xrn2	86	80.488	Tetraodon_nigroviridis
ENSGMOG00000013436	xrn2	100	72.904	ENSTBEG00000004119	XRN2	86	72.904	Tupaia_belangeri
ENSGMOG00000013436	xrn2	92	74.506	ENSTTRG00000009087	XRN2	79	74.506	Tursiops_truncatus
ENSGMOG00000013436	xrn2	100	73.203	ENSUAMG00000024634	XRN2	93	71.715	Ursus_americanus
ENSGMOG00000013436	xrn2	97	72.773	ENSUMAG00000004012	XRN2	81	72.773	Ursus_maritimus
ENSGMOG00000013436	xrn2	79	81.230	ENSVPAG00000010694	XRN2	68	81.230	Vicugna_pacos
ENSGMOG00000013436	xrn2	100	72.904	ENSVVUG00000012178	XRN2	86	72.904	Vulpes_vulpes
ENSGMOG00000013436	xrn2	100	75.892	ENSXETG00000023501	xrn2	87	75.892	Xenopus_tropicalis
ENSGMOG00000013436	xrn2	100	79.808	ENSXMAG00000000242	xrn2	92	85.158	Xiphophorus_maculatus