EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000013448 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 1a
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
4997 bases
Position
chrGeneScaffold_1523:149496-154492
Accession
ZDB-GENE-030131-3238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000014381PABPPF00658.184.1e-3211
ENSGMOP00000014381RRM_5PF13893.62.1e-0711
ENSGMOP00000014381RRM_1PF00076.221.1e-9014
ENSGMOP00000014381RRM_1PF00076.221.1e-9024
ENSGMOP00000014381RRM_1PF00076.221.1e-9034
ENSGMOP00000014381RRM_1PF00076.221.1e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000014751-1938-ENSGMOP00000014381645 (aa)-UPI00023F2D6F
Gene Model
Click here to download ENSGMOG00000013448's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013448's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000013448pabpc1a5833.684ENSGMOG00000005250rbms2b5233.684
ENSGMOG00000013448pabpc1a9973.676ENSGMOG00000019025pabpc49874.143
ENSGMOG00000013448pabpc1a5837.349ENSGMOG00000003760elavl39237.349
ENSGMOG00000013448pabpc1a9967.033ENSGMOG00000004437pabpc1l9966.823
ENSGMOG00000013448pabpc1a5830.634ENSGMOG00000005612tial17630.634
ENSGMOG00000013448pabpc1a5730.943ENSGMOG00000001341ncl5430.943
ENSGMOG00000013448pabpc1a5838.554ENSGMOG00000011182ELAVL29238.554
ENSGMOG00000013448pabpc1a10081.424ENSGMOG00000002448-9981.550
ENSGMOG00000013448pabpc1a5631.579ENSGMOG00000014835elavl1a9831.579
ENSGMOG00000013448pabpc1a5231.496ENSGMOG00000014008-5432.283
ENSGMOG00000013448pabpc1a5836.145ENSGMOG00000006515elavl49136.145
ENSGMOG00000013448pabpc1a5631.646ENSGMOG00000009633rbm14b6931.646
ENSGMOG00000013448pabpc1a7131.492ENSGMOG00000008843tia19431.492
ENSGMOG00000013448pabpc1a5638.798ENSGMOG00000002519sf3b45338.798
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000013448pabpc1a5779.592ENSG00000186288PABPC1L2A9879.592Homo_sapiens
ENSGMOG00000013448pabpc1a5779.592ENSG00000184388PABPC1L2B9879.592Homo_sapiens
ENSGMOG00000013448pabpc1a9993.972ENSAPOG00000015105pabpc1a9993.663Acanthochromis_polyacanthus
ENSGMOG00000013448pabpc1a9989.938ENSAPOG00000017776pabpc1b9989.938Acanthochromis_polyacanthus
ENSGMOG00000013448pabpc1a5879.592ENSAMEG00000019441-9879.592Ailuropoda_melanoleuca
ENSGMOG00000013448pabpc1a9993.509ENSACIG00000004685pabpc1a9993.354Amphilophus_citrinellus
ENSGMOG00000013448pabpc1a10085.208ENSACIG00000018366pabpc1b9985.340Amphilophus_citrinellus
ENSGMOG00000013448pabpc1a9993.663ENSAOCG00000011656pabpc1a9993.818Amphiprion_ocellaris
ENSGMOG00000013448pabpc1a9989.474ENSAOCG00000019839pabpc1b9989.474Amphiprion_ocellaris
ENSGMOG00000013448pabpc1a9989.474ENSAPEG00000010435pabpc1b9989.474Amphiprion_percula
ENSGMOG00000013448pabpc1a9993.663ENSAPEG00000006963pabpc1a9993.818Amphiprion_percula
ENSGMOG00000013448pabpc1a9993.354ENSATEG00000024852pabpc1a9993.663Anabas_testudineus
ENSGMOG00000013448pabpc1a9989.026ENSATEG00000012917pabpc1b9989.026Anabas_testudineus
ENSGMOG00000013448pabpc1a5779.592ENSANAG00000019431-9879.592Aotus_nancymaae
ENSGMOG00000013448pabpc1a5779.592ENSANAG00000019429-9879.592Aotus_nancymaae
ENSGMOG00000013448pabpc1a9994.725ENSACLG00000009399pabpc1a9994.725Astatotilapia_calliptera
ENSGMOG00000013448pabpc1a10087.944ENSACLG00000014335pabpc1b9988.080Astatotilapia_calliptera
ENSGMOG00000013448pabpc1a9989.319ENSAMXG00000008599pabpc1b9989.319Astyanax_mexicanus
ENSGMOG00000013448pabpc1a5878.537ENSBTAG00000050902-9878.537Bos_taurus
ENSGMOG00000013448pabpc1a5876.555ENSBTAG00000052491-9876.555Bos_taurus
ENSGMOG00000013448pabpc1a5779.592ENSCJAG00000041326-9879.592Callithrix_jacchus
ENSGMOG00000013448pabpc1a5878.537ENSCAFG00020002052-9878.537Canis_lupus_dingo
ENSGMOG00000013448pabpc1a5779.592ENSCHIG00000006283-9879.592Capra_hircus
ENSGMOG00000013448pabpc1a5779.592ENSCHIG00000011138-9879.592Capra_hircus
ENSGMOG00000013448pabpc1a5779.592ENSTSYG00000001775-9879.592Carlito_syrichta
ENSGMOG00000013448pabpc1a5879.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSGMOG00000013448pabpc1a5779.592ENSCCAG00000031524-9879.592Cebus_capucinus
ENSGMOG00000013448pabpc1a5779.592ENSCATG00000043125-9879.592Cercocebus_atys
ENSGMOG00000013448pabpc1a5779.592ENSCATG00000042826-9879.592Cercocebus_atys
ENSGMOG00000013448pabpc1a5777.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSGMOG00000013448pabpc1a5777.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSGMOG00000013448pabpc1a5879.592ENSCSAG00000000102-9879.592Chlorocebus_sabaeus
ENSGMOG00000013448pabpc1a5779.121ENSCGRG00001023387-9676.923Cricetulus_griseus_chok1gshd
ENSGMOG00000013448pabpc1a9993.178ENSCSEG00000013324pabpc1a10093.333Cynoglossus_semilaevis
ENSGMOG00000013448pabpc1a9987.771ENSCSEG00000015241-9987.771Cynoglossus_semilaevis
ENSGMOG00000013448pabpc1a9987.031ENSCVAG00000005489pabpc1b9987.031Cyprinodon_variegatus
ENSGMOG00000013448pabpc1a9993.818ENSCVAG00000021872pabpc1a9993.354Cyprinodon_variegatus
ENSGMOG00000013448pabpc1a10087.944ENSDARG00000021140pabpc1b9992.908Danio_rerio
ENSGMOG00000013448pabpc1a9990.402ENSDARG00000017219pabpc1a9990.557Danio_rerio
ENSGMOG00000013448pabpc1a5879.894ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSGMOG00000013448pabpc1a5777.041ENSDORG00000011362-9877.041Dipodomys_ordii
ENSGMOG00000013448pabpc1a5878.155ENSEASG00005010399-9878.155Equus_asinus_asinus
ENSGMOG00000013448pabpc1a5878.155ENSECAG00000002620-9878.155Equus_caballus
ENSGMOG00000013448pabpc1a5875.510ENSEEUG00000008203-9875.510Erinaceus_europaeus
ENSGMOG00000013448pabpc1a9993.344ENSELUG00000003614pabpc1a10092.724Esox_lucius
ENSGMOG00000013448pabpc1a5859.052ENSELUG00000005389-9759.052Esox_lucius
ENSGMOG00000013448pabpc1a9987.191ENSELUG00000015062-9987.191Esox_lucius
ENSGMOG00000013448pabpc1a5779.592ENSFCAG00000039701-9879.592Felis_catus
ENSGMOG00000013448pabpc1a5879.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSGMOG00000013448pabpc1a9988.080ENSFHEG00000008186pabpc1b9988.080Fundulus_heteroclitus
ENSGMOG00000013448pabpc1a9993.663ENSFHEG00000018979pabpc1a9993.818Fundulus_heteroclitus
ENSGMOG00000013448pabpc1a9993.354ENSGAFG00000019750pabpc1a9993.663Gambusia_affinis
ENSGMOG00000013448pabpc1a9988.336ENSGAFG00000010193pabpc1b9988.336Gambusia_affinis
ENSGMOG00000013448pabpc1a9988.700ENSGACG00000003771pabpc1b9989.009Gasterosteus_aculeatus
ENSGMOG00000013448pabpc1a9995.827ENSGACG00000003572pabpc1a9995.827Gasterosteus_aculeatus
ENSGMOG00000013448pabpc1a5779.592ENSGGOG00000043933-9879.592Gorilla_gorilla
ENSGMOG00000013448pabpc1a5779.592ENSGGOG00000038606-9879.592Gorilla_gorilla
ENSGMOG00000013448pabpc1a10087.944ENSHBUG00000002075pabpc1b9988.080Haplochromis_burtoni
ENSGMOG00000013448pabpc1a9994.725ENSHBUG00000020487pabpc1a9994.725Haplochromis_burtoni
ENSGMOG00000013448pabpc1a5778.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSGMOG00000013448pabpc1a5778.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSGMOG00000013448pabpc1a5778.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSGMOG00000013448pabpc1a9993.045ENSHCOG00000013502pabpc1a9993.199Hippocampus_comes
ENSGMOG00000013448pabpc1a9875.166ENSHCOG00000003175pabpc1b9968.839Hippocampus_comes
ENSGMOG00000013448pabpc1a10082.844ENSIPUG00000010791-10082.844Ictalurus_punctatus
ENSGMOG00000013448pabpc1a9988.992ENSIPUG00000008848pabpc1a9989.302Ictalurus_punctatus
ENSGMOG00000013448pabpc1a7354.393ENSIPUG00000021244-6554.393Ictalurus_punctatus
ENSGMOG00000013448pabpc1a8153.731ENSIPUG00000018724-7953.731Ictalurus_punctatus
ENSGMOG00000013448pabpc1a5879.082ENSSTOG00000026028-9879.082Ictidomys_tridecemlineatus
ENSGMOG00000013448pabpc1a5879.082ENSSTOG00000022096-9879.082Ictidomys_tridecemlineatus
ENSGMOG00000013448pabpc1a5778.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSGMOG00000013448pabpc1a9994.281ENSKMAG00000000605pabpc1a9993.663Kryptolebias_marmoratus
ENSGMOG00000013448pabpc1a9987.597ENSKMAG00000008049pabpc1b9987.597Kryptolebias_marmoratus
ENSGMOG00000013448pabpc1a9994.900ENSLBEG00000024002-9994.436Labrus_bergylta
ENSGMOG00000013448pabpc1a10088.872ENSLBEG00000026845pabpc1b9989.009Labrus_bergylta
ENSGMOG00000013448pabpc1a5878.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSGMOG00000013448pabpc1a5779.188ENSMFAG00000028878-9879.188Macaca_fascicularis
ENSGMOG00000013448pabpc1a5779.592ENSMMUG00000037681-9879.592Macaca_mulatta
ENSGMOG00000013448pabpc1a5779.592ENSMMUG00000039929-9879.592Macaca_mulatta
ENSGMOG00000013448pabpc1a5779.592ENSMMUG00000009740-9879.592Macaca_mulatta
ENSGMOG00000013448pabpc1a5779.592ENSMNEG00000037732-9879.592Macaca_nemestrina
ENSGMOG00000013448pabpc1a5779.592ENSMLEG00000027495-9879.592Mandrillus_leucophaeus
ENSGMOG00000013448pabpc1a9994.495ENSMAMG00000004502-9994.495Mastacembelus_armatus
ENSGMOG00000013448pabpc1a9988.545ENSMAMG00000014610pabpc1b9988.545Mastacembelus_armatus
ENSGMOG00000013448pabpc1a10087.944ENSMZEG00005026745pabpc1b9988.080Maylandia_zebra
ENSGMOG00000013448pabpc1a9994.725ENSMZEG00005025416pabpc1a9994.725Maylandia_zebra
ENSGMOG00000013448pabpc1a5779.592ENSMICG00000047642-9879.592Microcebus_murinus
ENSGMOG00000013448pabpc1a10083.153ENSMMOG00000018009pabpc1b9982.817Mola_mola
ENSGMOG00000013448pabpc1a9994.037ENSMMOG00000018044pabpc1a9994.393Mola_mola
ENSGMOG00000013448pabpc1a9871.226ENSMODG00000013156-9871.384Monodelphis_domestica
ENSGMOG00000013448pabpc1a9965.426ENSMODG00000015024-9965.426Monodelphis_domestica
ENSGMOG00000013448pabpc1a9993.354ENSMALG00000013020-9993.663Monopterus_albus
ENSGMOG00000013448pabpc1a10082.071ENSMALG00000006066pabpc1b10082.844Monopterus_albus
ENSGMOG00000013448pabpc1a5781.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSGMOG00000013448pabpc1a9994.725ENSNBRG00000003068-9994.725Neolamprologus_brichardi
ENSGMOG00000013448pabpc1a9988.080ENSNBRG00000013737pabpc1b9988.080Neolamprologus_brichardi
ENSGMOG00000013448pabpc1a5779.592ENSNLEG00000018128-9879.592Nomascus_leucogenys
ENSGMOG00000013448pabpc1a5779.082ENSODEG00000018540-9879.082Octodon_degus
ENSGMOG00000013448pabpc1a10087.790ENSONIG00000002717pabpc1b9987.926Oreochromis_niloticus
ENSGMOG00000013448pabpc1a9992.581ENSONIG00000006871-9992.427Oreochromis_niloticus
ENSGMOG00000013448pabpc1a5879.592ENSOCUG00000002565-9879.592Oryctolagus_cuniculus
ENSGMOG00000013448pabpc1a9983.099ENSORLG00000003008-9982.942Oryzias_latipes
ENSGMOG00000013448pabpc1a9998.333ENSORLG00000002691pabpc1a10098.333Oryzias_latipes
ENSGMOG00000013448pabpc1a9993.818ENSORLG00020022398pabpc1a9993.972Oryzias_latipes_hni
ENSGMOG00000013448pabpc1a9983.099ENSORLG00020022259-9982.353Oryzias_latipes_hni
ENSGMOG00000013448pabpc1a9982.817ENSORLG00015010932-9982.663Oryzias_latipes_hsok
ENSGMOG00000013448pabpc1a9993.663ENSORLG00015013633pabpc19993.818Oryzias_latipes_hsok
ENSGMOG00000013448pabpc1a9993.663ENSOMEG00000020219pabpc1a9993.972Oryzias_melastigma
ENSGMOG00000013448pabpc1a8980.549ENSOMEG00000013627pabpc1b9980.549Oryzias_melastigma
ENSGMOG00000013448pabpc1a5879.592ENSOGAG00000029513-9879.592Otolemur_garnettii
ENSGMOG00000013448pabpc1a5879.592ENSOGAG00000026047-9879.592Otolemur_garnettii
ENSGMOG00000013448pabpc1a5879.592ENSOARG00000005943-9879.592Ovis_aries
ENSGMOG00000013448pabpc1a5779.592ENSPPAG00000012920-9879.592Pan_paniscus
ENSGMOG00000013448pabpc1a5879.592ENSPPRG00000011804-9879.592Panthera_pardus
ENSGMOG00000013448pabpc1a5879.592ENSPPRG00000011809-9879.592Panthera_pardus
ENSGMOG00000013448pabpc1a5779.592ENSPTRG00000028252-9879.592Pan_troglodytes
ENSGMOG00000013448pabpc1a5779.592ENSPANG00000011549-9879.592Papio_anubis
ENSGMOG00000013448pabpc1a9988.700ENSPKIG00000005676pabpc1b9988.700Paramormyrops_kingsleyae
ENSGMOG00000013448pabpc1a6992.152ENSPMGG00000023134-9792.152Periophthalmus_magnuspinnatus
ENSGMOG00000013448pabpc1a6997.079ENSPMGG00000022487pabpc1a9297.079Periophthalmus_magnuspinnatus
ENSGMOG00000013448pabpc1a9970.846ENSPCIG00000016995-5570.846Phascolarctos_cinereus
ENSGMOG00000013448pabpc1a9993.972ENSPFOG00000010815pabpc1a9994.281Poecilia_formosa
ENSGMOG00000013448pabpc1a9987.869ENSPFOG00000005917pabpc1b9987.869Poecilia_formosa
ENSGMOG00000013448pabpc1a9993.509ENSPLAG00000004114pabpc1a9993.818Poecilia_latipinna
ENSGMOG00000013448pabpc1a9988.180ENSPLAG00000001388pabpc1b9988.180Poecilia_latipinna
ENSGMOG00000013448pabpc1a9993.509ENSPMEG00000001334pabpc1a9993.818Poecilia_mexicana
ENSGMOG00000013448pabpc1a9987.869ENSPMEG00000014399pabpc1b9987.869Poecilia_mexicana
ENSGMOG00000013448pabpc1a9994.725ENSPREG00000019595pabpc1a9995.327Poecilia_reticulata
ENSGMOG00000013448pabpc1a9988.180ENSPREG00000010911pabpc1b9988.180Poecilia_reticulata
ENSGMOG00000013448pabpc1a5879.592ENSPPYG00000020468-9879.592Pongo_abelii
ENSGMOG00000013448pabpc1a5879.592ENSPCAG00000005308-9879.592Procavia_capensis
ENSGMOG00000013448pabpc1a5779.082ENSPCOG00000026349-9879.082Propithecus_coquereli
ENSGMOG00000013448pabpc1a5880.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSGMOG00000013448pabpc1a9993.199ENSPNYG00000005192pabpc1a9993.045Pundamilia_nyererei
ENSGMOG00000013448pabpc1a10087.944ENSPNYG00000012578pabpc1b9988.080Pundamilia_nyererei
ENSGMOG00000013448pabpc1a9990.388ENSPNAG00000028408pabpc1a9990.233Pygocentrus_nattereri
ENSGMOG00000013448pabpc1a9988.545ENSPNAG00000024626pabpc1b9988.545Pygocentrus_nattereri
ENSGMOG00000013448pabpc1a8588.028ENSRBIG00000028738-9588.028Rhinopithecus_bieti
ENSGMOG00000013448pabpc1a5779.592ENSRBIG00000027173-9879.592Rhinopithecus_bieti
ENSGMOG00000013448pabpc1a5779.592ENSRROG00000017404-9879.592Rhinopithecus_roxellana
ENSGMOG00000013448pabpc1a9863.608ENSSHAG00000000511-10063.133Sarcophilus_harrisii
ENSGMOG00000013448pabpc1a6879.191ENSSFOG00015019668-8879.191Scleropages_formosus
ENSGMOG00000013448pabpc1a10088.545ENSSFOG00015002752-9988.682Scleropages_formosus
ENSGMOG00000013448pabpc1a9988.527ENSSFOG00015006662pabpc1a9988.527Scleropages_formosus
ENSGMOG00000013448pabpc1a9988.509ENSSMAG00000006869pabpc1b9988.509Scophthalmus_maximus
ENSGMOG00000013448pabpc1a9993.972ENSSMAG00000010803pabpc1a9993.663Scophthalmus_maximus
ENSGMOG00000013448pabpc1a9987.152ENSSDUG00000011965pabpc1b9987.152Seriola_dumerili
ENSGMOG00000013448pabpc1a9993.663ENSSDUG00000006675pabpc1a9993.818Seriola_dumerili
ENSGMOG00000013448pabpc1a9988.940ENSSLDG00000014156pabpc1b9988.940Seriola_lalandi_dorsalis
ENSGMOG00000013448pabpc1a9993.663ENSSLDG00000011661pabpc1a9993.818Seriola_lalandi_dorsalis
ENSGMOG00000013448pabpc1a9993.663ENSSPAG00000014453-9993.818Stegastes_partitus
ENSGMOG00000013448pabpc1a9989.319ENSSPAG00000019265pabpc1b9989.319Stegastes_partitus
ENSGMOG00000013448pabpc1a5779.592ENSSSCG00000032167-9879.592Sus_scrofa
ENSGMOG00000013448pabpc1a5779.592ENSSSCG00000036336-9879.592Sus_scrofa
ENSGMOG00000013448pabpc1a9985.471ENSTRUG00000003767-9985.471Takifugu_rubripes
ENSGMOG00000013448pabpc1a9993.509ENSTRUG00000011577-9993.509Takifugu_rubripes
ENSGMOG00000013448pabpc1a9990.812ENSTNIG00000013307pabpc1a9990.812Tetraodon_nigroviridis
ENSGMOG00000013448pabpc1a9986.180ENSTNIG00000009153pabpc1b9986.025Tetraodon_nigroviridis
ENSGMOG00000013448pabpc1a5879.592ENSTTRG00000013181-9879.592Tursiops_truncatus
ENSGMOG00000013448pabpc1a5779.592ENSUAMG00000008089-9879.592Ursus_americanus
ENSGMOG00000013448pabpc1a9753.503ENSUMAG00000023926-8968.508Ursus_maritimus
ENSGMOG00000013448pabpc1a5779.592ENSUMAG00000003364-9879.592Ursus_maritimus
ENSGMOG00000013448pabpc1a5878.500ENSVVUG00000015892-9778.500Vulpes_vulpes
ENSGMOG00000013448pabpc1a9744.191ENSXETG00000015439-9743.919Xenopus_tropicalis
ENSGMOG00000013448pabpc1a9989.596ENSXCOG00000017066pabpc1a9989.752Xiphophorus_couchianus
ENSGMOG00000013448pabpc1a9981.069ENSXCOG00000019901pabpc1b9984.292Xiphophorus_couchianus
ENSGMOG00000013448pabpc1a9988.336ENSXMAG00000003753pabpc1b9988.336Xiphophorus_maculatus
ENSGMOG00000013448pabpc1a9993.818ENSXMAG00000002555pabpc1a9994.127Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us