EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000013563 (Gene tree)
Gene ID: -
Gene Symbol: zgc:63587
Alias: -
Full Name: zgc:63587
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 16850 bases
Position: chrGeneScaffold_2124:8509-25358
Accession: ZDB-GENE-040426-1175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014504	MMR_HSR1	PF01926.23	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014878	-	1047	-	ENSGMOP00000014504	348 (aa)	-	UPI00023F2F06

Gene Model

Click here to download ENSGMOG00000013563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000013563	zgc:63587	94	49.432	ENSGMOG00000007005	sept4a	86	49.432
ENSGMOG00000013563	zgc:63587	87	41.042	ENSGMOG00000005532	sept8b	67	41.042
ENSGMOG00000013563	zgc:63587	83	49.658	ENSGMOG00000007022	-	99	49.658
ENSGMOG00000013563	zgc:63587	83	62.887	ENSGMOG00000004394	sept15	80	62.887
ENSGMOG00000013563	zgc:63587	98	87.246	ENSGMOG00000017631	sept2	89	87.246
ENSGMOG00000013563	zgc:63587	88	42.857	ENSGMOG00000001671	sept6	69	42.857
ENSGMOG00000013563	zgc:63587	91	55.108	ENSGMOG00000008992	SEPT7	81	53.061
ENSGMOG00000013563	zgc:63587	84	47.797	ENSGMOG00000009662	sept12	95	47.797
ENSGMOG00000013563	zgc:63587	85	68.919	ENSGMOG00000011574	SEPT4	61	68.919
ENSGMOG00000013563	zgc:63587	84	45.455	ENSGMOG00000008857	sept8a	64	45.455
ENSGMOG00000013563	zgc:63587	83	60.345	ENSGMOG00000006606	sept7b	82	54.942
ENSGMOG00000013563	zgc:63587	84	48.485	ENSGMOG00000005438	sept3	81	48.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013563	zgc:63587	100	97.414	ENSAPOG00000021616	zgc:63587	100	97.414	Acanthochromis_polyacanthus
ENSGMOG00000013563	zgc:63587	89	96.764	ENSACIG00000006540	zgc:63587	100	96.764	Amphilophus_citrinellus
ENSGMOG00000013563	zgc:63587	100	96.552	ENSAOCG00000015026	zgc:63587	100	96.552	Amphiprion_ocellaris
ENSGMOG00000013563	zgc:63587	100	96.552	ENSAPEG00000017625	zgc:63587	100	96.552	Amphiprion_percula
ENSGMOG00000013563	zgc:63587	100	96.552	ENSATEG00000020519	zgc:63587	100	96.552	Anabas_testudineus
ENSGMOG00000013563	zgc:63587	100	92.550	ENSACAG00000000754	-	100	92.550	Anolis_carolinensis
ENSGMOG00000013563	zgc:63587	100	96.264	ENSACLG00000011287	zgc:63587	100	96.264	Astatotilapia_calliptera
ENSGMOG00000013563	zgc:63587	100	96.275	ENSAMXG00000006164	zgc:63587	96	96.275	Astyanax_mexicanus
ENSGMOG00000013563	zgc:63587	100	93.410	ENSCPBG00000010648	-	100	93.410	Chrysemys_picta_bellii
ENSGMOG00000013563	zgc:63587	100	95.115	ENSCSEG00000019626	zgc:63587	100	95.115	Cynoglossus_semilaevis
ENSGMOG00000013563	zgc:63587	100	95.977	ENSCVAG00000017959	zgc:63587	100	95.977	Cyprinodon_variegatus
ENSGMOG00000013563	zgc:63587	68	93.277	ENSDARG00000017140	zgc:63587	86	93.277	Danio_rerio
ENSGMOG00000013563	zgc:63587	100	97.414	ENSELUG00000009060	zgc:63587	100	97.414	Esox_lucius
ENSGMOG00000013563	zgc:63587	100	92.550	ENSFALG00000008010	-	100	92.550	Ficedula_albicollis
ENSGMOG00000013563	zgc:63587	100	95.690	ENSFHEG00000018583	zgc:63587	100	95.690	Fundulus_heteroclitus
ENSGMOG00000013563	zgc:63587	100	93.123	ENSGALG00000001652	SEPT2L	100	93.123	Gallus_gallus
ENSGMOG00000013563	zgc:63587	100	95.977	ENSGAFG00000000805	zgc:63587	100	95.977	Gambusia_affinis
ENSGMOG00000013563	zgc:63587	100	95.977	ENSGACG00000005552	zgc:63587	100	95.977	Gasterosteus_aculeatus
ENSGMOG00000013563	zgc:63587	100	93.410	ENSGAGG00000014380	-	100	93.410	Gopherus_agassizii
ENSGMOG00000013563	zgc:63587	100	96.264	ENSHBUG00000013996	zgc:63587	100	96.264	Haplochromis_burtoni
ENSGMOG00000013563	zgc:63587	100	97.126	ENSHCOG00000005893	zgc:63587	100	97.126	Hippocampus_comes
ENSGMOG00000013563	zgc:63587	100	95.115	ENSKMAG00000003351	zgc:63587	100	95.115	Kryptolebias_marmoratus
ENSGMOG00000013563	zgc:63587	100	95.115	ENSLBEG00000025452	zgc:63587	100	95.115	Labrus_bergylta
ENSGMOG00000013563	zgc:63587	100	87.714	ENSLACG00000015335	zgc:63587	100	87.714	Latimeria_chalumnae
ENSGMOG00000013563	zgc:63587	99	96.232	ENSLOCG00000001793	zgc:63587	99	96.232	Lepisosteus_oculatus
ENSGMOG00000013563	zgc:63587	100	96.264	ENSMAMG00000014467	zgc:63587	100	96.264	Mastacembelus_armatus
ENSGMOG00000013563	zgc:63587	100	96.264	ENSMZEG00005009713	zgc:63587	100	96.264	Maylandia_zebra
ENSGMOG00000013563	zgc:63587	100	80.229	ENSMGAG00000001294	-	100	80.229	Meleagris_gallopavo
ENSGMOG00000013563	zgc:63587	92	97.188	ENSMMOG00000011692	zgc:63587	91	97.188	Mola_mola
ENSGMOG00000013563	zgc:63587	100	91.143	ENSMODG00000010193	-	95	91.143	Monodelphis_domestica
ENSGMOG00000013563	zgc:63587	89	96.117	ENSMALG00000020157	zgc:63587	100	96.117	Monopterus_albus
ENSGMOG00000013563	zgc:63587	100	96.264	ENSNBRG00000018582	-	100	96.264	Neolamprologus_brichardi
ENSGMOG00000013563	zgc:63587	100	96.264	ENSONIG00000014408	zgc:63587	100	96.264	Oreochromis_niloticus
ENSGMOG00000013563	zgc:63587	100	95.977	ENSORLG00000002669	zgc:63587	100	95.977	Oryzias_latipes
ENSGMOG00000013563	zgc:63587	100	95.977	ENSORLG00020005356	zgc:63587	100	95.977	Oryzias_latipes_hni
ENSGMOG00000013563	zgc:63587	100	95.977	ENSORLG00015015159	zgc:63587	100	95.977	Oryzias_latipes_hsok
ENSGMOG00000013563	zgc:63587	100	95.977	ENSOMEG00000017925	zgc:63587	100	95.977	Oryzias_melastigma
ENSGMOG00000013563	zgc:63587	100	96.848	ENSPKIG00000024604	zgc:63587	100	96.848	Paramormyrops_kingsleyae
ENSGMOG00000013563	zgc:63587	100	92.550	ENSPSIG00000002946	-	100	92.550	Pelodiscus_sinensis
ENSGMOG00000013563	zgc:63587	90	93.269	ENSPMGG00000018374	zgc:63587	100	93.269	Periophthalmus_magnuspinnatus
ENSGMOG00000013563	zgc:63587	100	92.529	ENSPCIG00000025491	-	99	92.529	Phascolarctos_cinereus
ENSGMOG00000013563	zgc:63587	100	96.264	ENSPFOG00000011730	zgc:63587	100	96.264	Poecilia_formosa
ENSGMOG00000013563	zgc:63587	100	96.264	ENSPLAG00000018604	zgc:63587	100	96.264	Poecilia_latipinna
ENSGMOG00000013563	zgc:63587	100	95.977	ENSPMEG00000004117	zgc:63587	100	95.977	Poecilia_mexicana
ENSGMOG00000013563	zgc:63587	100	95.690	ENSPREG00000011612	zgc:63587	100	95.690	Poecilia_reticulata
ENSGMOG00000013563	zgc:63587	100	95.977	ENSPNYG00000008409	zgc:63587	100	95.977	Pundamilia_nyererei
ENSGMOG00000013563	zgc:63587	100	95.702	ENSPNAG00000000463	zgc:63587	86	96.250	Pygocentrus_nattereri
ENSGMOG00000013563	zgc:63587	100	91.977	ENSSHAG00000011013	-	100	91.977	Sarcophilus_harrisii
ENSGMOG00000013563	zgc:63587	100	95.989	ENSSFOG00015014108	zgc:63587	100	95.989	Scleropages_formosus
ENSGMOG00000013563	zgc:63587	100	95.115	ENSSMAG00000006113	-	100	95.115	Scophthalmus_maximus
ENSGMOG00000013563	zgc:63587	98	96.765	ENSSDUG00000002763	zgc:63587	95	96.765	Seriola_dumerili
ENSGMOG00000013563	zgc:63587	100	97.126	ENSSLDG00000004826	zgc:63587	100	97.126	Seriola_lalandi_dorsalis
ENSGMOG00000013563	zgc:63587	100	92.550	ENSSPUG00000015358	-	100	92.550	Sphenodon_punctatus
ENSGMOG00000013563	zgc:63587	57	98.485	ENSSPAG00000000807	zgc:63587	63	98.485	Stegastes_partitus
ENSGMOG00000013563	zgc:63587	100	96.839	ENSSPAG00000015654	-	100	96.839	Stegastes_partitus
ENSGMOG00000013563	zgc:63587	100	92.264	ENSTGUG00000008445	-	100	92.264	Taeniopygia_guttata
ENSGMOG00000013563	zgc:63587	100	96.264	ENSTRUG00000016492	zgc:63587	100	96.264	Takifugu_rubripes
ENSGMOG00000013563	zgc:63587	100	95.402	ENSTNIG00000015927	zgc:63587	100	95.402	Tetraodon_nigroviridis
ENSGMOG00000013563	zgc:63587	99	93.623	ENSXETG00000018605	sept2-a	99	93.623	Xenopus_tropicalis
ENSGMOG00000013563	zgc:63587	95	96.657	ENSXCOG00000002678	zgc:63587	98	96.657	Xiphophorus_couchianus
ENSGMOG00000013563	zgc:63587	100	95.977	ENSXMAG00000014718	zgc:63587	100	95.977	Xiphophorus_maculatus