EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000013599 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 62916 bases
Position: chrGeneScaffold_3949:126162-189077
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014584	ResIII	PF04851.15	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000014959	-	5664	-	ENSGMOP00000014584	1887 (aa)	-	UPI00023F2FBC

Gene Model

Click here to download ENSGMOG00000013599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000013599	chd3	55	78.947	ENSGMOG00000017923	-	61	74.703
ENSGMOG00000013599	chd3	51	73.022	ENSGMOG00000015722	chd4a	89	73.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013599	chd3	91	80.914	ENSG00000170004	CHD3	89	80.305	Homo_sapiens
ENSGMOG00000013599	chd3	79	90.052	ENSAPOG00000005614	chd3	96	79.825	Acanthochromis_polyacanthus
ENSGMOG00000013599	chd3	66	82.131	ENSAMEG00000003025	-	91	81.701	Ailuropoda_melanoleuca
ENSGMOG00000013599	chd3	79	90.323	ENSACIG00000019671	chd3	99	90.323	Amphilophus_citrinellus
ENSGMOG00000013599	chd3	91	87.374	ENSAOCG00000023784	chd3	97	91.099	Amphiprion_ocellaris
ENSGMOG00000013599	chd3	91	87.273	ENSAPEG00000006341	chd3	85	86.869	Amphiprion_percula
ENSGMOG00000013599	chd3	91	87.185	ENSATEG00000000848	chd3	95	89.005	Anabas_testudineus
ENSGMOG00000013599	chd3	91	80.183	ENSACAG00000004276	CHD3	84	79.675	Anolis_carolinensis
ENSGMOG00000013599	chd3	88	80.914	ENSANAG00000034323	CHD3	89	80.305	Aotus_nancymaae
ENSGMOG00000013599	chd3	91	84.045	ENSACLG00000009222	chd3	97	79.624	Astatotilapia_calliptera
ENSGMOG00000013599	chd3	91	80.914	ENSBTAG00000014377	CHD3	87	80.305	Bos_taurus
ENSGMOG00000013599	chd3	91	80.812	ENSCJAG00000014766	CHD3	89	80.426	Callithrix_jacchus
ENSGMOG00000013599	chd3	90	81.015	ENSCAFG00000016859	CHD3	87	80.406	Canis_familiaris
ENSGMOG00000013599	chd3	87	81.015	ENSCAFG00020007422	CHD3	92	80.406	Canis_lupus_dingo
ENSGMOG00000013599	chd3	91	81.015	ENSCHIG00000016737	CHD3	88	80.406	Capra_hircus
ENSGMOG00000013599	chd3	91	80.914	ENSTSYG00000035658	CHD3	89	80.305	Carlito_syrichta
ENSGMOG00000013599	chd3	91	76.345	ENSCAPG00000014864	CHD3	87	75.736	Cavia_aperea
ENSGMOG00000013599	chd3	91	80.914	ENSCPOG00000022653	CHD3	87	80.305	Cavia_porcellus
ENSGMOG00000013599	chd3	91	80.914	ENSCCAG00000034792	CHD3	87	80.305	Cebus_capucinus
ENSGMOG00000013599	chd3	91	80.914	ENSCATG00000041717	CHD3	89	80.305	Cercocebus_atys
ENSGMOG00000013599	chd3	91	80.914	ENSCLAG00000010523	CHD3	90	80.305	Chinchilla_lanigera
ENSGMOG00000013599	chd3	91	80.914	ENSCSAG00000011122	CHD3	88	80.305	Chlorocebus_sabaeus
ENSGMOG00000013599	chd3	79	91.096	ENSCPBG00000011966	CHD3	89	91.156	Chrysemys_picta_bellii
ENSGMOG00000013599	chd3	91	80.914	ENSCANG00000037641	CHD3	89	80.305	Colobus_angolensis_palliatus
ENSGMOG00000013599	chd3	90	80.711	ENSCGRG00001011306	Chd3	90	80.102	Cricetulus_griseus_chok1gshd
ENSGMOG00000013599	chd3	87	75.887	ENSCGRG00000007878	Chd3	88	75.025	Cricetulus_griseus_crigri
ENSGMOG00000013599	chd3	86	89.030	ENSCSEG00000004489	chd3	94	89.030	Cynoglossus_semilaevis
ENSGMOG00000013599	chd3	86	89.177	ENSCVAG00000007293	chd3	94	89.177	Cyprinodon_variegatus
ENSGMOG00000013599	chd3	91	84.061	ENSDARG00000021405	chd3	93	83.553	Danio_rerio
ENSGMOG00000013599	chd3	82	83.639	ENSDNOG00000047846	CHD3	80	83.150	Dasypus_novemcinctus
ENSGMOG00000013599	chd3	91	80.812	ENSDORG00000010713	Chd3	90	80.305	Dipodomys_ordii
ENSGMOG00000013599	chd3	87	77.033	ENSETEG00000017733	CHD3	86	76.321	Echinops_telfairi
ENSGMOG00000013599	chd3	67	75.050	ENSEBUG00000008310	chd3	82	75.909	Eptatretus_burgeri
ENSGMOG00000013599	chd3	86	80.914	ENSEASG00005019360	CHD3	90	80.406	Equus_asinus_asinus
ENSGMOG00000013599	chd3	86	80.914	ENSECAG00000010051	CHD3	90	80.406	Equus_caballus
ENSGMOG00000013599	chd3	80	90.722	ENSEEUG00000015205	CHD3	77	90.722	Erinaceus_europaeus
ENSGMOG00000013599	chd3	77	95.238	ENSELUG00000019499	chd3	99	95.238	Esox_lucius
ENSGMOG00000013599	chd3	91	81.015	ENSFCAG00000009629	CHD3	85	80.406	Felis_catus
ENSGMOG00000013599	chd3	89	80.812	ENSFDAG00000008220	CHD3	85	80.203	Fukomys_damarensis
ENSGMOG00000013599	chd3	57	83.964	ENSGAFG00000004055	chd3	99	70.704	Gambusia_affinis
ENSGMOG00000013599	chd3	93	79.033	ENSGACG00000019275	chd3	92	78.693	Gasterosteus_aculeatus
ENSGMOG00000013599	chd3	70	80.691	ENSGAGG00000013164	CHD3	92	78.362	Gopherus_agassizii
ENSGMOG00000013599	chd3	91	80.914	ENSGGOG00000013496	CHD3	89	80.305	Gorilla_gorilla
ENSGMOG00000013599	chd3	91	80.914	ENSHGLG00000012017	CHD3	88	80.305	Heterocephalus_glaber_female
ENSGMOG00000013599	chd3	80	83.265	ENSHGLG00100013902	CHD3	89	83.012	Heterocephalus_glaber_male
ENSGMOG00000013599	chd3	86	89.565	ENSHCOG00000010170	chd3	83	89.565	Hippocampus_comes
ENSGMOG00000013599	chd3	83	86.165	ENSIPUG00000003271	chd3	88	85.656	Ictalurus_punctatus
ENSGMOG00000013599	chd3	91	80.914	ENSSTOG00000025907	CHD3	90	80.305	Ictidomys_tridecemlineatus
ENSGMOG00000013599	chd3	91	81.117	ENSJJAG00000017633	Chd3	90	80.508	Jaculus_jaculus
ENSGMOG00000013599	chd3	84	95.699	ENSKMAG00000019292	chd3	90	95.699	Kryptolebias_marmoratus
ENSGMOG00000013599	chd3	86	90.086	ENSLBEG00000028485	chd3	87	90.086	Labrus_bergylta
ENSGMOG00000013599	chd3	87	74.828	ENSLACG00000008031	CHD3	88	75.074	Latimeria_chalumnae
ENSGMOG00000013599	chd3	91	83.535	ENSLOCG00000013965	chd3	85	83.030	Lepisosteus_oculatus
ENSGMOG00000013599	chd3	79	82.759	ENSLAFG00000000572	CHD3	81	82.759	Loxodonta_africana
ENSGMOG00000013599	chd3	91	80.914	ENSMFAG00000020113	CHD3	89	80.305	Macaca_fascicularis
ENSGMOG00000013599	chd3	91	78.116	ENSMMUG00000022221	CHD3	88	78.419	Macaca_mulatta
ENSGMOG00000013599	chd3	91	80.914	ENSMNEG00000001728	CHD3	90	79.391	Macaca_nemestrina
ENSGMOG00000013599	chd3	91	80.914	ENSMLEG00000032249	CHD3	89	80.305	Mandrillus_leucophaeus
ENSGMOG00000013599	chd3	79	91.099	ENSMAMG00000000564	chd3	91	91.099	Mastacembelus_armatus
ENSGMOG00000013599	chd3	90	80.609	ENSMAUG00000013873	Chd3	87	80.983	Mesocricetus_auratus
ENSGMOG00000013599	chd3	91	80.914	ENSMICG00000008741	CHD3	87	80.305	Microcebus_murinus
ENSGMOG00000013599	chd3	90	80.711	ENSMOCG00000004848	Chd3	90	80.102	Microtus_ochrogaster
ENSGMOG00000013599	chd3	88	90.830	ENSMMOG00000012699	chd3	89	90.830	Mola_mola
ENSGMOG00000013599	chd3	85	80.793	ENSMODG00000007509	CHD3	92	80.183	Monodelphis_domestica
ENSGMOG00000013599	chd3	91	80.609	MGP_CAROLIEiJ_G0016564	Chd3	89	80.000	Mus_caroli
ENSGMOG00000013599	chd3	91	80.609	ENSMUSG00000018474	Chd3	89	80.000	Mus_musculus
ENSGMOG00000013599	chd3	91	80.609	MGP_PahariEiJ_G0017695	Chd3	90	80.000	Mus_pahari
ENSGMOG00000013599	chd3	91	80.609	MGP_SPRETEiJ_G0017400	Chd3	89	80.000	Mus_spretus
ENSGMOG00000013599	chd3	81	81.015	ENSMPUG00000008861	CHD3	89	80.406	Mustela_putorius_furo
ENSGMOG00000013599	chd3	91	80.914	ENSMLUG00000014643	-	87	80.305	Myotis_lucifugus
ENSGMOG00000013599	chd3	91	80.711	ENSNGAG00000000773	Chd3	87	80.102	Nannospalax_galili
ENSGMOG00000013599	chd3	80	89.418	ENSNBRG00000000636	chd3	94	82.212	Neolamprologus_brichardi
ENSGMOG00000013599	chd3	88	78.883	ENSNLEG00000009770	CHD3	89	78.477	Nomascus_leucogenys
ENSGMOG00000013599	chd3	80	75.319	ENSMEUG00000005852	CHD3	81	75.319	Notamacropus_eugenii
ENSGMOG00000013599	chd3	88	79.898	ENSOPRG00000011069	CHD3	90	79.289	Ochotona_princeps
ENSGMOG00000013599	chd3	91	80.914	ENSODEG00000017785	CHD3	88	80.305	Octodon_degus
ENSGMOG00000013599	chd3	90	86.789	ENSONIG00000009292	chd3	89	86.382	Oreochromis_niloticus
ENSGMOG00000013599	chd3	91	80.914	ENSOCUG00000029299	CHD3	89	80.305	Oryctolagus_cuniculus
ENSGMOG00000013599	chd3	76	83.636	ENSORLG00000007107	chd3	86	83.030	Oryzias_latipes
ENSGMOG00000013599	chd3	50	86.224	ENSORLG00020008387	chd3	82	85.251	Oryzias_latipes_hni
ENSGMOG00000013599	chd3	80	88.265	ENSOMEG00000013691	chd3	90	88.265	Oryzias_melastigma
ENSGMOG00000013599	chd3	91	81.015	ENSOGAG00000003216	CHD3	88	80.406	Otolemur_garnettii
ENSGMOG00000013599	chd3	91	81.015	ENSOARG00000017855	CHD3	87	80.406	Ovis_aries
ENSGMOG00000013599	chd3	91	78.175	ENSPPAG00000032886	CHD3	89	77.579	Pan_paniscus
ENSGMOG00000013599	chd3	91	81.015	ENSPPRG00000000626	CHD3	89	80.406	Panthera_pardus
ENSGMOG00000013599	chd3	91	80.914	ENSPTRG00000008714	CHD3	89	80.305	Pan_troglodytes
ENSGMOG00000013599	chd3	91	80.914	ENSPANG00000023938	CHD3	87	80.305	Papio_anubis
ENSGMOG00000013599	chd3	91	85.976	ENSPKIG00000006305	chd3	91	85.798	Paramormyrops_kingsleyae
ENSGMOG00000013599	chd3	55	80.101	ENSPSIG00000010177	CHD3	91	79.468	Pelodiscus_sinensis
ENSGMOG00000013599	chd3	90	80.812	ENSPEMG00000014262	Chd3	88	80.203	Peromyscus_maniculatus_bairdii
ENSGMOG00000013599	chd3	90	80.793	ENSPCIG00000005442	CHD3	83	90.909	Phascolarctos_cinereus
ENSGMOG00000013599	chd3	90	86.579	ENSPFOG00000012464	chd3	81	86.176	Poecilia_formosa
ENSGMOG00000013599	chd3	86	92.609	ENSPLAG00000002887	chd3	93	92.609	Poecilia_latipinna
ENSGMOG00000013599	chd3	90	86.585	ENSPREG00000011044	chd3	96	79.801	Poecilia_reticulata
ENSGMOG00000013599	chd3	90	79.029	ENSPPYG00000007940	CHD3	89	79.145	Pongo_abelii
ENSGMOG00000013599	chd3	88	81.769	ENSPCAG00000004350	CHD3	86	81.338	Procavia_capensis
ENSGMOG00000013599	chd3	91	80.914	ENSPCOG00000020952	CHD3	87	80.305	Propithecus_coquereli
ENSGMOG00000013599	chd3	74	82.075	ENSPVAG00000016344	CHD3	72	82.075	Pteropus_vampyrus
ENSGMOG00000013599	chd3	91	85.354	ENSPNAG00000020393	chd3	94	85.148	Pygocentrus_nattereri
ENSGMOG00000013599	chd3	86	80.508	ENSRNOG00000009722	Chd3	90	79.898	Rattus_norvegicus
ENSGMOG00000013599	chd3	91	78.175	ENSRBIG00000033562	CHD3	90	77.579	Rhinopithecus_bieti
ENSGMOG00000013599	chd3	91	80.914	ENSRROG00000029554	CHD3	89	80.305	Rhinopithecus_roxellana
ENSGMOG00000013599	chd3	91	80.914	ENSSBOG00000020719	CHD3	90	79.391	Saimiri_boliviensis_boliviensis
ENSGMOG00000013599	chd3	91	80.812	ENSSHAG00000014412	CHD3	91	80.203	Sarcophilus_harrisii
ENSGMOG00000013599	chd3	83	83.825	ENSSFOG00015023123	chd3	89	83.456	Scleropages_formosus
ENSGMOG00000013599	chd3	78	95.238	ENSSMAG00000006451	chd3	95	90.052	Scophthalmus_maximus
ENSGMOG00000013599	chd3	53	86.496	ENSSDUG00000005792	chd3	88	75.239	Seriola_dumerili
ENSGMOG00000013599	chd3	90	87.273	ENSSPAG00000013694	chd3	98	91.534	Stegastes_partitus
ENSGMOG00000013599	chd3	91	81.015	ENSSSCG00000021363	CHD3	90	80.406	Sus_scrofa
ENSGMOG00000013599	chd3	74	85.556	ENSTRUG00000014990	chd3	89	73.656	Takifugu_rubripes
ENSGMOG00000013599	chd3	91	86.290	ENSTNIG00000012998	chd3	91	85.887	Tetraodon_nigroviridis
ENSGMOG00000013599	chd3	58	84.689	ENSTBEG00000011454	-	63	84.689	Tupaia_belangeri
ENSGMOG00000013599	chd3	89	80.711	ENSTTRG00000010295	CHD3	85	80.102	Tursiops_truncatus
ENSGMOG00000013599	chd3	84	82.759	ENSUAMG00000005475	CHD3	91	82.759	Ursus_americanus
ENSGMOG00000013599	chd3	87	81.015	ENSVVUG00000028011	CHD3	89	80.406	Vulpes_vulpes
ENSGMOG00000013599	chd3	90	73.239	ENSXETG00000012991	chd3	83	72.837	Xenopus_tropicalis
ENSGMOG00000013599	chd3	50	84.592	ENSXCOG00000000809	chd3	90	76.099	Xiphophorus_couchianus
ENSGMOG00000013599	chd3	79	90.811	ENSXMAG00000016035	chd3	99	90.811	Xiphophorus_maculatus