EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000013818 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 19639 bases
Position: chrGeneScaffold_213:23896-43534
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014777	RNase_H	PF00075.24	1.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000015158	-	846	-	ENSGMOP00000014777	282 (aa)	-	UPI00023F2E37

Gene Model

Click here to download ENSGMOG00000013818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013818	rnaseh1	88	55.133	ENSG00000171865	RNASEH1	89	55.133	Homo_sapiens
ENSGMOG00000013818	rnaseh1	99	70.990	ENSAPOG00000000412	rnaseh1	97	72.014	Acanthochromis_polyacanthus
ENSGMOG00000013818	rnaseh1	89	53.333	ENSAMEG00000018433	RNASEH1	98	51.786	Ailuropoda_melanoleuca
ENSGMOG00000013818	rnaseh1	99	74.216	ENSACIG00000014666	rnaseh1	96	74.564	Amphilophus_citrinellus
ENSGMOG00000013818	rnaseh1	99	72.696	ENSAOCG00000015210	rnaseh1	97	73.379	Amphiprion_ocellaris
ENSGMOG00000013818	rnaseh1	99	73.038	ENSAPEG00000014104	rnaseh1	97	73.720	Amphiprion_percula
ENSGMOG00000013818	rnaseh1	99	74.061	ENSATEG00000000598	rnaseh1	96	74.061	Anabas_testudineus
ENSGMOG00000013818	rnaseh1	85	56.250	ENSAPLG00000001961	RNASEH1	100	56.250	Anas_platyrhynchos
ENSGMOG00000013818	rnaseh1	89	47.458	ENSACAG00000016857	rnaseh1	91	47.458	Anolis_carolinensis
ENSGMOG00000013818	rnaseh1	89	53.962	ENSANAG00000024055	RNASEH1	90	53.962	Aotus_nancymaae
ENSGMOG00000013818	rnaseh1	99	70.707	ENSACLG00000006741	rnaseh1	96	71.380	Astatotilapia_calliptera
ENSGMOG00000013818	rnaseh1	98	56.115	ENSAMXG00000042940	rnaseh1	98	57.090	Astyanax_mexicanus
ENSGMOG00000013818	rnaseh1	88	57.034	ENSBTAG00000016235	RNASEH1	91	56.458	Bos_taurus
ENSGMOG00000013818	rnaseh1	92	36.538	WBGene00004382	rnh-1.0	99	36.538	Caenorhabditis_elegans
ENSGMOG00000013818	rnaseh1	88	53.933	ENSCJAG00000035450	RNASEH1	89	53.933	Callithrix_jacchus
ENSGMOG00000013818	rnaseh1	96	53.357	ENSCAFG00000003259	RNASEH1	98	53.357	Canis_familiaris
ENSGMOG00000013818	rnaseh1	54	64.238	ENSCAFG00020004994	RNASEH1	97	64.238	Canis_lupus_dingo
ENSGMOG00000013818	rnaseh1	81	45.082	ENSCHIG00000022230	-	99	45.082	Capra_hircus
ENSGMOG00000013818	rnaseh1	88	59.289	ENSCHIG00000022264	-	89	59.289	Capra_hircus
ENSGMOG00000013818	rnaseh1	89	54.264	ENSTSYG00000012926	RNASEH1	89	54.264	Carlito_syrichta
ENSGMOG00000013818	rnaseh1	82	55.918	ENSCAPG00000004813	RNASEH1	98	55.918	Cavia_aperea
ENSGMOG00000013818	rnaseh1	88	55.344	ENSCPOG00000022278	Rnaseh1	86	55.344	Cavia_porcellus
ENSGMOG00000013818	rnaseh1	88	53.933	ENSCCAG00000038017	RNASEH1	89	53.933	Cebus_capucinus
ENSGMOG00000013818	rnaseh1	89	48.828	ENSCATG00000016818	-	89	48.828	Cercocebus_atys
ENSGMOG00000013818	rnaseh1	89	53.962	ENSCATG00000016515	-	90	53.962	Cercocebus_atys
ENSGMOG00000013818	rnaseh1	88	54.580	ENSCLAG00000002440	RNASEH1	89	54.580	Chinchilla_lanigera
ENSGMOG00000013818	rnaseh1	89	53.208	ENSCSAG00000006943	RNASEH1	90	53.208	Chlorocebus_sabaeus
ENSGMOG00000013818	rnaseh1	62	62.286	ENSCHOG00000008547	RNASEH1	86	62.286	Choloepus_hoffmanni
ENSGMOG00000013818	rnaseh1	90	55.515	ENSCPBG00000021620	RNASEH1	100	55.515	Chrysemys_picta_bellii
ENSGMOG00000013818	rnaseh1	89	38.989	ENSCING00000014054	-	92	38.989	Ciona_intestinalis
ENSGMOG00000013818	rnaseh1	74	37.719	ENSCSAVG00000000009	-	96	37.719	Ciona_savignyi
ENSGMOG00000013818	rnaseh1	89	53.585	ENSCANG00000037763	RNASEH1	90	53.585	Colobus_angolensis_palliatus
ENSGMOG00000013818	rnaseh1	95	52.015	ENSCGRG00001008950	Rnaseh1	99	50.508	Cricetulus_griseus_chok1gshd
ENSGMOG00000013818	rnaseh1	95	52.015	ENSCGRG00000006029	Rnaseh1	99	50.508	Cricetulus_griseus_crigri
ENSGMOG00000013818	rnaseh1	99	62.626	ENSCSEG00000005741	rnaseh1	94	64.469	Cynoglossus_semilaevis
ENSGMOG00000013818	rnaseh1	99	68.259	ENSCVAG00000018717	rnaseh1	97	68.259	Cyprinodon_variegatus
ENSGMOG00000013818	rnaseh1	91	64.234	ENSDARG00000042571	rnaseh1	99	64.234	Danio_rerio
ENSGMOG00000013818	rnaseh1	96	52.632	ENSDNOG00000016056	RNASEH1	98	52.632	Dasypus_novemcinctus
ENSGMOG00000013818	rnaseh1	98	52.265	ENSDORG00000000704	Rnaseh1	99	52.265	Dipodomys_ordii
ENSGMOG00000013818	rnaseh1	88	38.908	FBgn0023171	rnh1	92	38.908	Drosophila_melanogaster
ENSGMOG00000013818	rnaseh1	89	51.751	ENSETEG00000012674	RNASEH1	89	51.751	Echinops_telfairi
ENSGMOG00000013818	rnaseh1	90	47.674	ENSEBUG00000006116	rnaseh1	78	47.674	Eptatretus_burgeri
ENSGMOG00000013818	rnaseh1	89	45.392	ENSEBUG00000008898	rnaseh1	98	45.392	Eptatretus_burgeri
ENSGMOG00000013818	rnaseh1	99	52.721	ENSEASG00005022200	RNASEH1	98	52.721	Equus_asinus_asinus
ENSGMOG00000013818	rnaseh1	99	52.721	ENSECAG00000020695	RNASEH1	98	52.721	Equus_caballus
ENSGMOG00000013818	rnaseh1	99	66.554	ENSELUG00000010112	rnaseh1	99	66.554	Esox_lucius
ENSGMOG00000013818	rnaseh1	96	53.497	ENSFCAG00000025832	RNASEH1	98	53.497	Felis_catus
ENSGMOG00000013818	rnaseh1	99	52.649	ENSFALG00000002069	RNASEH1	99	52.131	Ficedula_albicollis
ENSGMOG00000013818	rnaseh1	88	55.078	ENSFDAG00000002035	RNASEH1	79	55.078	Fukomys_damarensis
ENSGMOG00000013818	rnaseh1	90	55.515	ENSGALG00000016389	RNASEH1	93	55.515	Gallus_gallus
ENSGMOG00000013818	rnaseh1	99	64.746	ENSGAFG00000001776	rnaseh1	99	64.746	Gambusia_affinis
ENSGMOG00000013818	rnaseh1	100	71.572	ENSGACG00000011935	rnaseh1	99	71.572	Gasterosteus_aculeatus
ENSGMOG00000013818	rnaseh1	89	56.667	ENSGAGG00000009150	RNASEH1	61	56.667	Gopherus_agassizii
ENSGMOG00000013818	rnaseh1	89	54.717	ENSGGOG00000034822	RNASEH1	90	54.717	Gorilla_gorilla
ENSGMOG00000013818	rnaseh1	99	70.707	ENSHBUG00000004666	rnaseh1	96	71.380	Haplochromis_burtoni
ENSGMOG00000013818	rnaseh1	88	52.672	ENSHGLG00000002585	Rnaseh1	82	52.672	Heterocephalus_glaber_female
ENSGMOG00000013818	rnaseh1	88	52.672	ENSHGLG00100005105	Rnaseh1	82	52.672	Heterocephalus_glaber_male
ENSGMOG00000013818	rnaseh1	99	66.221	ENSHCOG00000012329	rnaseh1	98	66.221	Hippocampus_comes
ENSGMOG00000013818	rnaseh1	99	60.000	ENSIPUG00000023060	rnaseh1	99	62.548	Ictalurus_punctatus
ENSGMOG00000013818	rnaseh1	88	52.672	ENSSTOG00000012774	RNASEH1	91	52.672	Ictidomys_tridecemlineatus
ENSGMOG00000013818	rnaseh1	87	42.023	ENSJJAG00000008994	-	90	42.023	Jaculus_jaculus
ENSGMOG00000013818	rnaseh1	80	51.709	ENSJJAG00000020238	Rnaseh1	90	51.709	Jaculus_jaculus
ENSGMOG00000013818	rnaseh1	89	48.289	ENSJJAG00000021481	-	89	48.289	Jaculus_jaculus
ENSGMOG00000013818	rnaseh1	99	67.241	ENSKMAG00000001373	rnaseh1	97	67.241	Kryptolebias_marmoratus
ENSGMOG00000013818	rnaseh1	98	72.401	ENSLBEG00000004480	rnaseh1	97	74.242	Labrus_bergylta
ENSGMOG00000013818	rnaseh1	90	54.710	ENSLACG00000007100	RNASEH1	89	56.522	Latimeria_chalumnae
ENSGMOG00000013818	rnaseh1	90	62.409	ENSLOCG00000017212	rnaseh1	98	62.271	Lepisosteus_oculatus
ENSGMOG00000013818	rnaseh1	88	55.556	ENSLAFG00000015091	RNASEH1	89	55.556	Loxodonta_africana
ENSGMOG00000013818	rnaseh1	97	50.865	ENSMFAG00000000063	-	98	50.865	Macaca_fascicularis
ENSGMOG00000013818	rnaseh1	89	50.775	ENSMFAG00000002323	-	90	50.775	Macaca_fascicularis
ENSGMOG00000013818	rnaseh1	89	51.163	ENSMMUG00000019280	-	90	51.163	Macaca_mulatta
ENSGMOG00000013818	rnaseh1	97	50.865	ENSMNEG00000040183	-	98	50.865	Macaca_nemestrina
ENSGMOG00000013818	rnaseh1	89	50.775	ENSMNEG00000029676	-	90	50.775	Macaca_nemestrina
ENSGMOG00000013818	rnaseh1	83	53.629	ENSMLEG00000039352	-	99	53.629	Mandrillus_leucophaeus
ENSGMOG00000013818	rnaseh1	89	50.575	ENSMLEG00000028662	-	90	50.575	Mandrillus_leucophaeus
ENSGMOG00000013818	rnaseh1	99	70.748	ENSMAMG00000019725	rnaseh1	95	72.059	Mastacembelus_armatus
ENSGMOG00000013818	rnaseh1	99	70.707	ENSMZEG00005013006	rnaseh1	96	71.380	Maylandia_zebra
ENSGMOG00000013818	rnaseh1	79	54.959	ENSMGAG00000013979	RNASEH1	98	54.959	Meleagris_gallopavo
ENSGMOG00000013818	rnaseh1	95	52.347	ENSMAUG00000014957	Rnaseh1	93	52.347	Mesocricetus_auratus
ENSGMOG00000013818	rnaseh1	88	53.612	ENSMICG00000033156	RNASEH1	88	53.612	Microcebus_murinus
ENSGMOG00000013818	rnaseh1	96	51.903	ENSMOCG00000015522	Rnaseh1	97	51.903	Microtus_ochrogaster
ENSGMOG00000013818	rnaseh1	99	69.759	ENSMMOG00000015902	rnaseh1	96	70.486	Mola_mola
ENSGMOG00000013818	rnaseh1	89	57.480	ENSMODG00000014491	-	89	57.480	Monodelphis_domestica
ENSGMOG00000013818	rnaseh1	78	51.542	ENSMODG00000028814	-	93	52.174	Monodelphis_domestica
ENSGMOG00000013818	rnaseh1	99	71.429	ENSMALG00000010565	rnaseh1	97	71.429	Monopterus_albus
ENSGMOG00000013818	rnaseh1	98	49.829	MGP_CAROLIEiJ_G0017660	Rnaseh1	99	49.829	Mus_caroli
ENSGMOG00000013818	rnaseh1	98	50.171	ENSMUSG00000020630	Rnaseh1	99	50.171	Mus_musculus
ENSGMOG00000013818	rnaseh1	98	51.064	MGP_PahariEiJ_G0029418	Rnaseh1	99	51.237	Mus_pahari
ENSGMOG00000013818	rnaseh1	98	51.590	MGP_SPRETEiJ_G0018502	Rnaseh1	99	51.590	Mus_spretus
ENSGMOG00000013818	rnaseh1	62	58.523	ENSMPUG00000012984	RNASEH1	85	58.523	Mustela_putorius_furo
ENSGMOG00000013818	rnaseh1	89	53.208	ENSNGAG00000015966	Rnaseh1	85	53.208	Nannospalax_galili
ENSGMOG00000013818	rnaseh1	99	70.370	ENSNBRG00000008739	rnaseh1	96	71.044	Neolamprologus_brichardi
ENSGMOG00000013818	rnaseh1	88	47.909	ENSNLEG00000015400	RNASEH1	87	47.909	Nomascus_leucogenys
ENSGMOG00000013818	rnaseh1	83	50.424	ENSNLEG00000000059	-	90	50.424	Nomascus_leucogenys
ENSGMOG00000013818	rnaseh1	74	43.333	ENSMEUG00000003610	-	74	43.333	Notamacropus_eugenii
ENSGMOG00000013818	rnaseh1	88	53.462	ENSOPRG00000005072	RNASEH1	89	53.462	Ochotona_princeps
ENSGMOG00000013818	rnaseh1	88	55.642	ENSODEG00000000235	Rnaseh1	86	55.642	Octodon_degus
ENSGMOG00000013818	rnaseh1	91	70.545	ENSONIG00000018697	rnaseh1	99	70.545	Oreochromis_niloticus
ENSGMOG00000013818	rnaseh1	88	55.294	ENSOCUG00000006117	RNASEH1	90	54.864	Oryctolagus_cuniculus
ENSGMOG00000013818	rnaseh1	90	70.833	ENSORLG00000018127	rnaseh1	96	70.833	Oryzias_latipes
ENSGMOG00000013818	rnaseh1	99	68.403	ENSORLG00020013660	rnaseh1	97	68.403	Oryzias_latipes_hni
ENSGMOG00000013818	rnaseh1	99	69.097	ENSORLG00015011338	rnaseh1	97	69.097	Oryzias_latipes_hsok
ENSGMOG00000013818	rnaseh1	90	67.170	ENSOMEG00000004710	rnaseh1	99	67.170	Oryzias_melastigma
ENSGMOG00000013818	rnaseh1	88	54.167	ENSOGAG00000017176	RNASEH1	89	54.167	Otolemur_garnettii
ENSGMOG00000013818	rnaseh1	96	49.481	ENSOARG00000005386	RNASEH1	98	49.481	Ovis_aries
ENSGMOG00000013818	rnaseh1	89	54.717	ENSPPAG00000034221	RNASEH1	90	54.717	Pan_paniscus
ENSGMOG00000013818	rnaseh1	96	53.147	ENSPPRG00000015513	RNASEH1	98	53.147	Panthera_pardus
ENSGMOG00000013818	rnaseh1	83	54.733	ENSPTIG00000019034	RNASEH1	83	54.733	Panthera_tigris_altaica
ENSGMOG00000013818	rnaseh1	89	54.717	ENSPTRG00000011614	RNASEH1	90	54.717	Pan_troglodytes
ENSGMOG00000013818	rnaseh1	82	47.390	ENSPTRG00000043403	-	91	47.390	Pan_troglodytes
ENSGMOG00000013818	rnaseh1	89	48.276	ENSPANG00000018246	-	89	48.276	Papio_anubis
ENSGMOG00000013818	rnaseh1	96	51.399	ENSPANG00000000443	RNASEH1	97	54.251	Papio_anubis
ENSGMOG00000013818	rnaseh1	91	60.215	ENSPKIG00000003146	rnaseh1	100	60.573	Paramormyrops_kingsleyae
ENSGMOG00000013818	rnaseh1	89	53.333	ENSPSIG00000002937	RNASEH1	99	53.333	Pelodiscus_sinensis
ENSGMOG00000013818	rnaseh1	98	62.455	ENSPMGG00000017463	rnaseh1	99	62.455	Periophthalmus_magnuspinnatus
ENSGMOG00000013818	rnaseh1	95	52.000	ENSPEMG00000022465	-	93	52.347	Peromyscus_maniculatus_bairdii
ENSGMOG00000013818	rnaseh1	99	52.837	ENSPCIG00000023334	-	98	52.837	Phascolarctos_cinereus
ENSGMOG00000013818	rnaseh1	52	40.136	ENSPCIG00000026047	-	83	40.136	Phascolarctos_cinereus
ENSGMOG00000013818	rnaseh1	99	65.541	ENSPFOG00000002841	rnaseh1	99	65.541	Poecilia_formosa
ENSGMOG00000013818	rnaseh1	73	55.349	ENSPLAG00000021349	-	85	55.349	Poecilia_latipinna
ENSGMOG00000013818	rnaseh1	99	65.085	ENSPMEG00000016826	rnaseh1	99	65.085	Poecilia_mexicana
ENSGMOG00000013818	rnaseh1	99	63.907	ENSPREG00000012197	rnaseh1	99	63.907	Poecilia_reticulata
ENSGMOG00000013818	rnaseh1	96	42.361	ENSPPYG00000025873	RNASEH1	98	42.361	Pongo_abelii
ENSGMOG00000013818	rnaseh1	81	49.383	ENSPPYG00000008067	-	90	49.383	Pongo_abelii
ENSGMOG00000013818	rnaseh1	89	56.809	ENSPCAG00000002500	RNASEH1	90	56.809	Procavia_capensis
ENSGMOG00000013818	rnaseh1	89	49.020	ENSPCOG00000019444	RNASEH1	89	49.020	Propithecus_coquereli
ENSGMOG00000013818	rnaseh1	96	50.538	ENSPVAG00000002070	RNASEH1	98	50.538	Pteropus_vampyrus
ENSGMOG00000013818	rnaseh1	99	70.034	ENSPNYG00000001292	rnaseh1	96	70.707	Pundamilia_nyererei
ENSGMOG00000013818	rnaseh1	99	64.561	ENSPNAG00000022344	rnaseh1	99	64.561	Pygocentrus_nattereri
ENSGMOG00000013818	rnaseh1	98	51.228	ENSRNOG00000008584	Rnaseh1	97	50.676	Rattus_norvegicus
ENSGMOG00000013818	rnaseh1	98	51.027	ENSRBIG00000034222	RNASEH1	98	51.027	Rhinopithecus_bieti
ENSGMOG00000013818	rnaseh1	98	51.027	ENSRROG00000041761	RNASEH1	98	51.027	Rhinopithecus_roxellana
ENSGMOG00000013818	rnaseh1	89	50.000	YMR234W	-	82	50.000	Saccharomyces_cerevisiae
ENSGMOG00000013818	rnaseh1	88	54.475	ENSSBOG00000025411	RNASEH1	89	54.475	Saimiri_boliviensis_boliviensis
ENSGMOG00000013818	rnaseh1	96	55.957	ENSSHAG00000013051	RNASEH1	96	55.957	Sarcophilus_harrisii
ENSGMOG00000013818	rnaseh1	99	60.498	ENSSFOG00015002709	rnaseh1	99	61.151	Scleropages_formosus
ENSGMOG00000013818	rnaseh1	99	71.575	ENSSMAG00000007586	rnaseh1	96	71.918	Scophthalmus_maximus
ENSGMOG00000013818	rnaseh1	95	72.183	ENSSDUG00000008217	rnaseh1	95	72.963	Seriola_dumerili
ENSGMOG00000013818	rnaseh1	88	68.582	ENSSLDG00000000442	rnaseh1	94	72.289	Seriola_lalandi_dorsalis
ENSGMOG00000013818	rnaseh1	91	52.768	ENSSPUG00000006644	RNASEH1	94	52.768	Sphenodon_punctatus
ENSGMOG00000013818	rnaseh1	99	75.768	ENSSPAG00000009353	rnaseh1	96	76.792	Stegastes_partitus
ENSGMOG00000013818	rnaseh1	88	54.373	ENSSSCG00000025305	RNASEH1	98	52.083	Sus_scrofa
ENSGMOG00000013818	rnaseh1	99	53.135	ENSTGUG00000012980	RNASEH1	99	52.475	Taeniopygia_guttata
ENSGMOG00000013818	rnaseh1	95	68.070	ENSTRUG00000015774	rnaseh1	97	68.382	Takifugu_rubripes
ENSGMOG00000013818	rnaseh1	91	71.004	ENSTNIG00000010715	rnaseh1	97	71.004	Tetraodon_nigroviridis
ENSGMOG00000013818	rnaseh1	89	50.951	ENSTTRG00000001615	RNASEH1	90	50.951	Tursiops_truncatus
ENSGMOG00000013818	rnaseh1	54	64.901	ENSUAMG00000018254	RNASEH1	78	64.901	Ursus_americanus
ENSGMOG00000013818	rnaseh1	68	53.234	ENSUMAG00000003941	RNASEH1	65	53.234	Ursus_maritimus
ENSGMOG00000013818	rnaseh1	96	44.792	ENSVPAG00000011589	RNASEH1	98	44.792	Vicugna_pacos
ENSGMOG00000013818	rnaseh1	96	52.500	ENSVVUG00000008633	RNASEH1	88	52.500	Vulpes_vulpes
ENSGMOG00000013818	rnaseh1	88	40.964	ENSXETG00000030371	-	99	40.964	Xenopus_tropicalis
ENSGMOG00000013818	rnaseh1	89	52.612	ENSXETG00000001212	rnaseh1	91	53.358	Xenopus_tropicalis
ENSGMOG00000013818	rnaseh1	99	65.529	ENSXMAG00000002357	rnaseh1	99	65.529	Xiphophorus_maculatus