EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000013878 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 3512 bases
Position: chrGeneScaffold_616:12005-15516
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000014826	RNA_pol_A_bac	PF01000.26	4.5e-28	1	1
ENSGMOP00000014826	RNA_pol_L	PF01193.24	1.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000015207	-	972	-	ENSGMOP00000014826	323 (aa)	-	UPI00023F2F1A

Gene Model

Click here to download ENSGMOG00000013878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000013878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000013878	polr1c	100	71.605	ENSG00000171453	POLR1C	100	75.806	Homo_sapiens
ENSGMOG00000013878	polr1c	100	79.268	ENSAPOG00000024356	polr1c	93	79.573	Acanthochromis_polyacanthus
ENSGMOG00000013878	polr1c	100	71.914	ENSAMEG00000012205	POLR1C	93	71.914	Ailuropoda_melanoleuca
ENSGMOG00000013878	polr1c	95	72.347	ENSACIG00000016268	polr1c	88	73.312	Amphilophus_citrinellus
ENSGMOG00000013878	polr1c	100	79.268	ENSAOCG00000011687	polr1c	90	79.573	Amphiprion_ocellaris
ENSGMOG00000013878	polr1c	100	79.878	ENSAPEG00000002433	polr1c	93	80.183	Amphiprion_percula
ENSGMOG00000013878	polr1c	99	81.846	ENSATEG00000005985	polr1c	92	82.462	Anabas_testudineus
ENSGMOG00000013878	polr1c	93	70.432	ENSAPLG00000002908	POLR1C	100	70.432	Anas_platyrhynchos
ENSGMOG00000013878	polr1c	89	71.280	ENSACAG00000009764	POLR1C	82	71.280	Anolis_carolinensis
ENSGMOG00000013878	polr1c	100	71.914	ENSANAG00000025805	POLR1C	92	71.914	Aotus_nancymaae
ENSGMOG00000013878	polr1c	100	82.317	ENSACLG00000006573	polr1c	93	83.232	Astatotilapia_calliptera
ENSGMOG00000013878	polr1c	60	30.303	ENSACLG00000004854	polr2c	80	30.303	Astatotilapia_calliptera
ENSGMOG00000013878	polr1c	100	80.556	ENSAMXG00000012062	polr1c	93	80.556	Astyanax_mexicanus
ENSGMOG00000013878	polr1c	100	72.222	ENSBTAG00000018969	POLR1C	93	72.222	Bos_taurus
ENSGMOG00000013878	polr1c	98	45.104	WBGene00019275	rpac-40	92	45.104	Caenorhabditis_elegans
ENSGMOG00000013878	polr1c	100	71.914	ENSCJAG00000005594	POLR1C	93	71.914	Callithrix_jacchus
ENSGMOG00000013878	polr1c	100	71.914	ENSCAFG00000001872	POLR1C	93	71.914	Canis_familiaris
ENSGMOG00000013878	polr1c	100	71.914	ENSCAFG00020012018	POLR1C	93	71.914	Canis_lupus_dingo
ENSGMOG00000013878	polr1c	100	71.692	ENSCHIG00000004352	POLR1C	93	71.692	Capra_hircus
ENSGMOG00000013878	polr1c	100	72.222	ENSTSYG00000011921	POLR1C	93	72.222	Carlito_syrichta
ENSGMOG00000013878	polr1c	93	72.333	ENSCAPG00000015364	POLR1C	88	72.333	Cavia_aperea
ENSGMOG00000013878	polr1c	100	72.531	ENSCPOG00000038098	POLR1C	93	72.531	Cavia_porcellus
ENSGMOG00000013878	polr1c	100	71.605	ENSCCAG00000020169	POLR1C	93	71.605	Cebus_capucinus
ENSGMOG00000013878	polr1c	100	71.605	ENSCATG00000044045	POLR1C	93	71.605	Cercocebus_atys
ENSGMOG00000013878	polr1c	100	72.531	ENSCLAG00000009266	POLR1C	93	72.531	Chinchilla_lanigera
ENSGMOG00000013878	polr1c	100	70.988	ENSCSAG00000011913	POLR1C	93	70.988	Chlorocebus_sabaeus
ENSGMOG00000013878	polr1c	66	66.667	ENSCHOG00000006601	POLR1C	100	66.667	Choloepus_hoffmanni
ENSGMOG00000013878	polr1c	100	74.074	ENSCPBG00000025203	POLR1C	93	74.074	Chrysemys_picta_bellii
ENSGMOG00000013878	polr1c	100	54.012	ENSCING00000003563	-	93	54.012	Ciona_intestinalis
ENSGMOG00000013878	polr1c	100	71.605	ENSCANG00000043167	POLR1C	93	71.605	Colobus_angolensis_palliatus
ENSGMOG00000013878	polr1c	100	71.914	ENSCGRG00001017533	Polr1c	93	71.914	Cricetulus_griseus_chok1gshd
ENSGMOG00000013878	polr1c	93	72.000	ENSCGRG00000013225	Polr1c	100	72.000	Cricetulus_griseus_crigri
ENSGMOG00000013878	polr1c	100	79.876	ENSCSEG00000018097	polr1c	93	79.876	Cynoglossus_semilaevis
ENSGMOG00000013878	polr1c	60	30.653	ENSCVAG00000017931	polr2c	76	30.653	Cyprinodon_variegatus
ENSGMOG00000013878	polr1c	66	84.038	ENSCVAG00000005684	polr1c	90	82.222	Cyprinodon_variegatus
ENSGMOG00000013878	polr1c	100	81.173	ENSDARG00000039400	polr1c	89	81.173	Danio_rerio
ENSGMOG00000013878	polr1c	100	72.531	ENSDNOG00000042693	POLR1C	93	72.531	Dasypus_novemcinctus
ENSGMOG00000013878	polr1c	100	71.914	ENSDORG00000000429	Polr1c	93	71.914	Dipodomys_ordii
ENSGMOG00000013878	polr1c	96	51.757	FBgn0031657	CG3756	93	51.757	Drosophila_melanogaster
ENSGMOG00000013878	polr1c	100	67.901	ENSETEG00000010807	POLR1C	93	67.901	Echinops_telfairi
ENSGMOG00000013878	polr1c	100	68.210	ENSEBUG00000013725	polr1c	93	68.210	Eptatretus_burgeri
ENSGMOG00000013878	polr1c	100	72.222	ENSEASG00005003338	POLR1C	93	72.222	Equus_asinus_asinus
ENSGMOG00000013878	polr1c	100	71.914	ENSECAG00000023516	POLR1C	92	71.914	Equus_caballus
ENSGMOG00000013878	polr1c	100	72.840	ENSEEUG00000005471	POLR1C	93	72.840	Erinaceus_europaeus
ENSGMOG00000013878	polr1c	100	83.333	ENSELUG00000013027	polr1c	93	83.333	Esox_lucius
ENSGMOG00000013878	polr1c	100	71.605	ENSFCAG00000009735	POLR1C	93	71.605	Felis_catus
ENSGMOG00000013878	polr1c	100	70.370	ENSFALG00000012111	POLR1C	100	70.370	Ficedula_albicollis
ENSGMOG00000013878	polr1c	100	72.222	ENSFDAG00000008428	POLR1C	93	72.222	Fukomys_damarensis
ENSGMOG00000013878	polr1c	100	68.731	ENSFHEG00000000262	polr1c	92	69.040	Fundulus_heteroclitus
ENSGMOG00000013878	polr1c	100	71.914	ENSGALG00000010349	POLR1C	93	71.914	Gallus_gallus
ENSGMOG00000013878	polr1c	100	79.573	ENSGAFG00000010153	polr1c	93	80.183	Gambusia_affinis
ENSGMOG00000013878	polr1c	100	80.488	ENSGACG00000002453	polr1c	93	81.707	Gasterosteus_aculeatus
ENSGMOG00000013878	polr1c	100	72.840	ENSGAGG00000010640	POLR1C	93	72.840	Gopherus_agassizii
ENSGMOG00000013878	polr1c	100	71.605	ENSGGOG00000010903	POLR1C	93	71.605	Gorilla_gorilla
ENSGMOG00000013878	polr1c	60	30.303	ENSHBUG00000023040	polr2c	80	30.303	Haplochromis_burtoni
ENSGMOG00000013878	polr1c	100	75.617	ENSHBUG00000017816	polr1c	93	75.617	Haplochromis_burtoni
ENSGMOG00000013878	polr1c	100	71.914	ENSHGLG00000019441	POLR1C	100	70.115	Heterocephalus_glaber_female
ENSGMOG00000013878	polr1c	100	71.914	ENSHGLG00100005970	POLR1C	100	70.115	Heterocephalus_glaber_male
ENSGMOG00000013878	polr1c	100	75.610	ENSHCOG00000002179	polr1c	93	75.610	Hippocampus_comes
ENSGMOG00000013878	polr1c	99	81.677	ENSIPUG00000024464	polr1c	92	81.677	Ictalurus_punctatus
ENSGMOG00000013878	polr1c	100	72.222	ENSSTOG00000010631	POLR1C	93	72.222	Ictidomys_tridecemlineatus
ENSGMOG00000013878	polr1c	100	72.531	ENSJJAG00000023110	Polr1c	93	72.531	Jaculus_jaculus
ENSGMOG00000013878	polr1c	100	78.354	ENSKMAG00000014305	polr1c	91	78.659	Kryptolebias_marmoratus
ENSGMOG00000013878	polr1c	100	81.402	ENSLBEG00000014925	polr1c	93	82.012	Labrus_bergylta
ENSGMOG00000013878	polr1c	100	58.308	ENSLACG00000012567	POLR1C	96	58.308	Latimeria_chalumnae
ENSGMOG00000013878	polr1c	100	76.235	ENSLOCG00000016710	polr1c	89	76.235	Lepisosteus_oculatus
ENSGMOG00000013878	polr1c	93	72.517	ENSLAFG00000026248	POLR1C	100	72.517	Loxodonta_africana
ENSGMOG00000013878	polr1c	100	71.605	ENSMFAG00000046295	POLR1C	93	71.605	Macaca_fascicularis
ENSGMOG00000013878	polr1c	100	71.605	ENSMMUG00000015192	POLR1C	93	71.605	Macaca_mulatta
ENSGMOG00000013878	polr1c	100	71.605	ENSMNEG00000028073	POLR1C	93	71.605	Macaca_nemestrina
ENSGMOG00000013878	polr1c	100	71.605	ENSMLEG00000034818	POLR1C	93	71.605	Mandrillus_leucophaeus
ENSGMOG00000013878	polr1c	100	82.317	ENSMAMG00000008700	polr1c	93	82.317	Mastacembelus_armatus
ENSGMOG00000013878	polr1c	100	82.012	ENSMZEG00005018545	polr1c	93	82.927	Maylandia_zebra
ENSGMOG00000013878	polr1c	90	68.493	ENSMGAG00000011020	POLR1C	100	68.493	Meleagris_gallopavo
ENSGMOG00000013878	polr1c	100	71.914	ENSMAUG00000014329	Polr1c	93	71.914	Mesocricetus_auratus
ENSGMOG00000013878	polr1c	100	70.988	ENSMICG00000005027	POLR1C	93	70.988	Microcebus_murinus
ENSGMOG00000013878	polr1c	100	72.222	ENSMOCG00000017549	Polr1c	93	72.222	Microtus_ochrogaster
ENSGMOG00000013878	polr1c	100	65.944	ENSMMOG00000005380	polr1c	92	66.254	Mola_mola
ENSGMOG00000013878	polr1c	90	73.288	ENSMODG00000018964	POLR1C	100	73.288	Monodelphis_domestica
ENSGMOG00000013878	polr1c	100	70.370	ENSMALG00000011711	polr1c	92	70.679	Monopterus_albus
ENSGMOG00000013878	polr1c	100	62.654	MGP_CAROLIEiJ_G0021662	Polr1c	100	70.115	Mus_caroli
ENSGMOG00000013878	polr1c	100	72.222	ENSMUSG00000067148	Polr1c	100	70.498	Mus_musculus
ENSGMOG00000013878	polr1c	100	72.222	MGP_PahariEiJ_G0020654	Polr1c	100	70.498	Mus_pahari
ENSGMOG00000013878	polr1c	100	72.222	MGP_SPRETEiJ_G0022574	Polr1c	100	70.498	Mus_spretus
ENSGMOG00000013878	polr1c	100	71.914	ENSMPUG00000012916	POLR1C	85	71.914	Mustela_putorius_furo
ENSGMOG00000013878	polr1c	100	72.531	ENSMLUG00000017751	POLR1C	93	72.531	Myotis_lucifugus
ENSGMOG00000013878	polr1c	100	72.222	ENSNGAG00000023487	Polr1c	100	72.603	Nannospalax_galili
ENSGMOG00000013878	polr1c	100	82.317	ENSNBRG00000018742	polr1c	93	83.232	Neolamprologus_brichardi
ENSGMOG00000013878	polr1c	100	71.605	ENSNLEG00000004035	POLR1C	93	71.605	Nomascus_leucogenys
ENSGMOG00000013878	polr1c	100	62.037	ENSMEUG00000006778	POLR1C	93	62.037	Notamacropus_eugenii
ENSGMOG00000013878	polr1c	75	71.193	ENSOPRG00000000145	POLR1C	91	71.193	Ochotona_princeps
ENSGMOG00000013878	polr1c	68	69.091	ENSODEG00000017109	-	100	69.091	Octodon_degus
ENSGMOG00000013878	polr1c	100	73.457	ENSODEG00000015831	-	93	73.457	Octodon_degus
ENSGMOG00000013878	polr1c	100	82.622	ENSONIG00000013133	polr1c	92	83.537	Oreochromis_niloticus
ENSGMOG00000013878	polr1c	100	69.444	ENSOANG00000003043	POLR1C	93	69.444	Ornithorhynchus_anatinus
ENSGMOG00000013878	polr1c	100	71.296	ENSOCUG00000005504	POLR1C	93	71.296	Oryctolagus_cuniculus
ENSGMOG00000013878	polr1c	100	78.328	ENSORLG00000019743	polr1c	94	78.328	Oryzias_latipes
ENSGMOG00000013878	polr1c	82	60.650	ENSORLG00020005555	polr1c	81	60.650	Oryzias_latipes_hni
ENSGMOG00000013878	polr1c	100	77.439	ENSORLG00020006489	POLR1C	94	78.370	Oryzias_latipes_hni
ENSGMOG00000013878	polr1c	100	76.829	ENSORLG00015013322	polr1c	93	76.829	Oryzias_latipes_hsok
ENSGMOG00000013878	polr1c	100	78.354	ENSOMEG00000016527	polr1c	93	78.354	Oryzias_melastigma
ENSGMOG00000013878	polr1c	100	71.779	ENSOGAG00000016318	POLR1C	93	71.779	Otolemur_garnettii
ENSGMOG00000013878	polr1c	100	71.914	ENSOARG00000007503	POLR1C	93	71.914	Ovis_aries
ENSGMOG00000013878	polr1c	100	71.605	ENSPPAG00000043678	POLR1C	93	71.605	Pan_paniscus
ENSGMOG00000013878	polr1c	100	71.605	ENSPPRG00000009760	POLR1C	93	71.605	Panthera_pardus
ENSGMOG00000013878	polr1c	100	71.605	ENSPTIG00000014813	POLR1C	93	71.605	Panthera_tigris_altaica
ENSGMOG00000013878	polr1c	100	71.605	ENSPTRG00000018202	POLR1C	93	71.605	Pan_troglodytes
ENSGMOG00000013878	polr1c	100	71.605	ENSPANG00000009025	POLR1C	92	71.605	Papio_anubis
ENSGMOG00000013878	polr1c	100	79.012	ENSPKIG00000009858	polr1c	93	79.012	Paramormyrops_kingsleyae
ENSGMOG00000013878	polr1c	100	73.148	ENSPSIG00000012580	POLR1C	88	73.148	Pelodiscus_sinensis
ENSGMOG00000013878	polr1c	60	30.303	ENSPMGG00000021249	polr2c	77	30.303	Periophthalmus_magnuspinnatus
ENSGMOG00000013878	polr1c	99	68.731	ENSPMGG00000012121	polr1c	92	69.040	Periophthalmus_magnuspinnatus
ENSGMOG00000013878	polr1c	100	72.222	ENSPEMG00000006970	Polr1c	93	72.222	Peromyscus_maniculatus_bairdii
ENSGMOG00000013878	polr1c	99	70.497	ENSPMAG00000005560	polr1c	92	70.497	Petromyzon_marinus
ENSGMOG00000013878	polr1c	69	30.837	ENSPMAG00000004827	polr2c	93	30.837	Petromyzon_marinus
ENSGMOG00000013878	polr1c	100	72.840	ENSPCIG00000028137	POLR1C	92	72.840	Phascolarctos_cinereus
ENSGMOG00000013878	polr1c	100	80.488	ENSPFOG00000014357	polr1c	92	81.098	Poecilia_formosa
ENSGMOG00000013878	polr1c	100	80.488	ENSPFOG00000014342	POLR1C	93	81.098	Poecilia_formosa
ENSGMOG00000013878	polr1c	66	83.099	ENSPLAG00000004111	polr1c	91	82.727	Poecilia_latipinna
ENSGMOG00000013878	polr1c	100	80.488	ENSPMEG00000011877	-	93	81.098	Poecilia_mexicana
ENSGMOG00000013878	polr1c	100	80.488	ENSPMEG00000008420	polr1c	93	81.098	Poecilia_mexicana
ENSGMOG00000013878	polr1c	100	82.043	ENSPREG00000007985	polr1c	93	82.043	Poecilia_reticulata
ENSGMOG00000013878	polr1c	100	71.605	ENSPPYG00000016645	POLR1C	95	71.605	Pongo_abelii
ENSGMOG00000013878	polr1c	100	70.988	ENSPCOG00000024628	POLR1C	93	70.988	Propithecus_coquereli
ENSGMOG00000013878	polr1c	100	65.741	ENSPVAG00000005689	POLR1C	93	65.741	Pteropus_vampyrus
ENSGMOG00000013878	polr1c	100	82.424	ENSPNYG00000003620	polr1c	93	83.232	Pundamilia_nyererei
ENSGMOG00000013878	polr1c	100	81.481	ENSPNAG00000008443	polr1c	93	81.788	Pygocentrus_nattereri
ENSGMOG00000013878	polr1c	100	71.296	ENSRNOG00000019079	Polr1c	100	68.966	Rattus_norvegicus
ENSGMOG00000013878	polr1c	100	71.914	ENSRBIG00000007155	POLR1C	93	71.914	Rhinopithecus_bieti
ENSGMOG00000013878	polr1c	100	71.605	ENSRROG00000000257	POLR1C	93	71.605	Rhinopithecus_roxellana
ENSGMOG00000013878	polr1c	97	48.580	YPR110C	RPC40	94	48.580	Saccharomyces_cerevisiae
ENSGMOG00000013878	polr1c	100	71.605	ENSSBOG00000025735	POLR1C	92	71.579	Saimiri_boliviensis_boliviensis
ENSGMOG00000013878	polr1c	100	65.644	ENSSHAG00000014456	POLR1C	93	65.644	Sarcophilus_harrisii
ENSGMOG00000013878	polr1c	100	81.173	ENSSFOG00015019860	polr1c	93	81.173	Scleropages_formosus
ENSGMOG00000013878	polr1c	100	83.282	ENSSMAG00000018865	polr1c	93	83.282	Scophthalmus_maximus
ENSGMOG00000013878	polr1c	100	81.402	ENSSDUG00000015745	polr1c	85	82.012	Seriola_dumerili
ENSGMOG00000013878	polr1c	100	81.098	ENSSLDG00000018285	polr1c	85	81.707	Seriola_lalandi_dorsalis
ENSGMOG00000013878	polr1c	99	71.160	ENSSPUG00000011822	POLR1C	92	71.160	Sphenodon_punctatus
ENSGMOG00000013878	polr1c	100	80.183	ENSSPAG00000022369	polr1c	93	80.488	Stegastes_partitus
ENSGMOG00000013878	polr1c	100	71.296	ENSSSCG00000028007	POLR1C	97	70.861	Sus_scrofa
ENSGMOG00000013878	polr1c	100	70.679	ENSTGUG00000009159	POLR1C	96	70.679	Taeniopygia_guttata
ENSGMOG00000013878	polr1c	100	78.659	ENSTRUG00000006264	polr1c	93	78.659	Takifugu_rubripes
ENSGMOG00000013878	polr1c	55	68.715	ENSTBEG00000002254	POLR1C	100	68.715	Tupaia_belangeri
ENSGMOG00000013878	polr1c	81	68.939	ENSTTRG00000006344	POLR1C	76	68.939	Tursiops_truncatus
ENSGMOG00000013878	polr1c	100	71.914	ENSUAMG00000025602	POLR1C	93	71.914	Ursus_americanus
ENSGMOG00000013878	polr1c	100	71.914	ENSUMAG00000005938	POLR1C	93	71.914	Ursus_maritimus
ENSGMOG00000013878	polr1c	100	69.444	ENSVVUG00000028922	POLR1C	93	69.444	Vulpes_vulpes
ENSGMOG00000013878	polr1c	100	70.154	ENSXETG00000010882	polr1c	93	70.154	Xenopus_tropicalis
ENSGMOG00000013878	polr1c	100	80.615	ENSXCOG00000014185	polr1c	93	80.615	Xiphophorus_couchianus
ENSGMOG00000013878	polr1c	100	79.268	ENSXMAG00000015076	polr1c	93	80.183	Xiphophorus_maculatus