EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000014280 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 8101 bases
Position: chrGeneScaffold_3000:31953-40053
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000015285	RRM_5	PF13893.6	9e-07	1	1
ENSGMOP00000015285	RRM_1	PF00076.22	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000015676	-	2400	-	ENSGMOP00000015285	799 (aa)	-	UPI00023F2D9F

Gene Model

Click here to download ENSGMOG00000014280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000014280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000014280	safb	95	41.432	ENSG00000160633	SAFB	69	62.963	Homo_sapiens
ENSGMOG00000014280	safb	100	68.433	ENSAPOG00000022508	safb	100	67.373	Acanthochromis_polyacanthus
ENSGMOG00000014280	safb	65	39.935	ENSAMEG00000012254	SAFB	60	46.726	Ailuropoda_melanoleuca
ENSGMOG00000014280	safb	100	66.265	ENSACIG00000006247	safb	100	65.783	Amphilophus_citrinellus
ENSGMOG00000014280	safb	95	67.244	ENSAOCG00000006308	safb	99	66.253	Amphiprion_ocellaris
ENSGMOG00000014280	safb	100	67.803	ENSAPEG00000023342	safb	100	67.217	Amphiprion_percula
ENSGMOG00000014280	safb	100	68.949	ENSATEG00000004998	safb	100	68.595	Anabas_testudineus
ENSGMOG00000014280	safb	58	41.667	ENSAPLG00000006355	-	100	43.550	Anas_platyrhynchos
ENSGMOG00000014280	safb	59	39.192	ENSAPLG00000005780	-	98	40.956	Anas_platyrhynchos
ENSGMOG00000014280	safb	95	42.093	ENSANAG00000028821	SAFB	64	46.842	Aotus_nancymaae
ENSGMOG00000014280	safb	100	66.467	ENSACLG00000001926	safb	100	65.868	Astatotilapia_calliptera
ENSGMOG00000014280	safb	98	59.165	ENSAMXG00000018154	safb	100	56.689	Astyanax_mexicanus
ENSGMOG00000014280	safb	98	40.773	ENSBTAG00000007875	SAFB	56	47.348	Bos_taurus
ENSGMOG00000014280	safb	65	40.323	ENSCAFG00000018803	SAFB	51	45.841	Canis_familiaris
ENSGMOG00000014280	safb	65	40.000	ENSCAFG00020018943	SAFB	59	46.726	Canis_lupus_dingo
ENSGMOG00000014280	safb	98	40.909	ENSCHIG00000007262	SAFB	95	40.565	Capra_hircus
ENSGMOG00000014280	safb	95	41.905	ENSCCAG00000020193	SAFB	64	45.870	Cebus_capucinus
ENSGMOG00000014280	safb	95	41.315	ENSCATG00000029994	SAFB	64	45.870	Cercocebus_atys
ENSGMOG00000014280	safb	65	40.065	ENSCSAG00000009949	SAFB	59	46.221	Chlorocebus_sabaeus
ENSGMOG00000014280	safb	92	43.743	ENSCPBG00000010936	-	98	42.082	Chrysemys_picta_bellii
ENSGMOG00000014280	safb	91	42.130	ENSCPBG00000010928	-	98	40.904	Chrysemys_picta_bellii
ENSGMOG00000014280	safb	80	41.279	ENSCANG00000004774	-	73	57.692	Colobus_angolensis_palliatus
ENSGMOG00000014280	safb	94	39.863	ENSCANG00000019754	-	55	45.677	Colobus_angolensis_palliatus
ENSGMOG00000014280	safb	99	59.776	ENSCSEG00000019870	safb	100	61.721	Cynoglossus_semilaevis
ENSGMOG00000014280	safb	100	58.484	ENSCVAG00000002226	safb	100	57.901	Cyprinodon_variegatus
ENSGMOG00000014280	safb	96	57.757	ENSDARG00000020467	safb	98	56.301	Danio_rerio
ENSGMOG00000014280	safb	65	39.394	ENSDNOG00000015746	SAFB	50	50.829	Dasypus_novemcinctus
ENSGMOG00000014280	safb	63	40.449	ENSEASG00005023019	SAFB	61	45.246	Equus_asinus_asinus
ENSGMOG00000014280	safb	63	39.935	ENSECAG00000018659	SAFB	53	46.290	Equus_caballus
ENSGMOG00000014280	safb	99	61.467	ENSELUG00000022327	safb	99	59.953	Esox_lucius
ENSGMOG00000014280	safb	65	40.323	ENSFCAG00000011835	SAFB	59	45.760	Felis_catus
ENSGMOG00000014280	safb	63	42.070	ENSFALG00000013882	-	87	42.088	Ficedula_albicollis
ENSGMOG00000014280	safb	56	38.609	ENSFALG00000013881	-	98	41.190	Ficedula_albicollis
ENSGMOG00000014280	safb	100	60.361	ENSFHEG00000004219	safb	100	60.120	Fundulus_heteroclitus
ENSGMOG00000014280	safb	63	42.072	ENSGALG00000001948	-	97	43.337	Gallus_gallus
ENSGMOG00000014280	safb	63	42.691	ENSGALG00000013365	-	95	42.384	Gallus_gallus
ENSGMOG00000014280	safb	90	61.379	ENSGAFG00000016162	safb	82	59.751	Gambusia_affinis
ENSGMOG00000014280	safb	100	70.082	ENSGACG00000011385	safb	100	68.868	Gasterosteus_aculeatus
ENSGMOG00000014280	safb	71	50.984	ENSGAGG00000017702	-	79	51.789	Gopherus_agassizii
ENSGMOG00000014280	safb	96	47.351	ENSGAGG00000008424	-	99	45.601	Gopherus_agassizii
ENSGMOG00000014280	safb	95	41.549	ENSGGOG00000015109	SAFB	73	57.692	Gorilla_gorilla
ENSGMOG00000014280	safb	100	64.619	ENSHBUG00000009218	safb	100	63.759	Haplochromis_burtoni
ENSGMOG00000014280	safb	94	58.408	ENSHCOG00000001705	safb	99	57.995	Hippocampus_comes
ENSGMOG00000014280	safb	100	57.621	ENSIPUG00000024869	safb2	99	58.568	Ictalurus_punctatus
ENSGMOG00000014280	safb	58	38.448	ENSSTOG00000002783	SAFB	63	46.113	Ictidomys_tridecemlineatus
ENSGMOG00000014280	safb	63	37.713	ENSJJAG00000009021	Safb	61	46.631	Jaculus_jaculus
ENSGMOG00000014280	safb	100	64.988	ENSKMAG00000022308	safb	100	65.546	Kryptolebias_marmoratus
ENSGMOG00000014280	safb	64	42.581	ENSLACG00000018090	SAFB	98	46.323	Latimeria_chalumnae
ENSGMOG00000014280	safb	98	59.302	ENSLOCG00000003613	safb	99	57.674	Lepisosteus_oculatus
ENSGMOG00000014280	safb	95	40.489	ENSLAFG00000003840	SAFB	58	47.764	Loxodonta_africana
ENSGMOG00000014280	safb	95	41.315	ENSMFAG00000003885	SAFB	73	56.410	Macaca_fascicularis
ENSGMOG00000014280	safb	95	41.910	ENSMMUG00000017970	SAFB	73	56.410	Macaca_mulatta
ENSGMOG00000014280	safb	65	38.350	ENSMNEG00000035637	SAFB	73	56.410	Macaca_nemestrina
ENSGMOG00000014280	safb	95	39.394	ENSMLEG00000038637	SAFB	73	56.410	Mandrillus_leucophaeus
ENSGMOG00000014280	safb	100	68.728	ENSMAMG00000003357	safb	91	68.333	Mastacembelus_armatus
ENSGMOG00000014280	safb	100	66.824	ENSMZEG00005009120	safb	100	66.235	Maylandia_zebra
ENSGMOG00000014280	safb	63	39.073	ENSMGAG00000001101	-	97	39.714	Meleagris_gallopavo
ENSGMOG00000014280	safb	85	36.548	ENSMICG00000046795	-	67	69.231	Microcebus_murinus
ENSGMOG00000014280	safb	65	40.909	ENSMICG00000008739	-	97	41.096	Microcebus_murinus
ENSGMOG00000014280	safb	94	41.333	ENSMODG00000001236	SAFB	95	41.405	Monodelphis_domestica
ENSGMOG00000014280	safb	100	66.784	ENSMALG00000020330	safb	100	65.962	Monopterus_albus
ENSGMOG00000014280	safb	65	39.708	ENSMPUG00000006123	SAFB	56	45.855	Mustela_putorius_furo
ENSGMOG00000014280	safb	98	40.261	ENSMLUG00000001081	SAFB	59	45.487	Myotis_lucifugus
ENSGMOG00000014280	safb	98	41.229	ENSNLEG00000013551	SAFB	62	48.099	Nomascus_leucogenys
ENSGMOG00000014280	safb	58	39.394	ENSOPRG00000011561	-	99	40.408	Ochotona_princeps
ENSGMOG00000014280	safb	100	66.435	ENSONIG00000002318	safb	100	66.088	Oreochromis_niloticus
ENSGMOG00000014280	safb	98	64.068	ENSORLG00000016989	safb	100	62.976	Oryzias_latipes
ENSGMOG00000014280	safb	98	62.516	ENSORLG00020000404	safb	100	61.425	Oryzias_latipes_hni
ENSGMOG00000014280	safb	98	64.190	ENSORLG00015010733	safb	100	63.246	Oryzias_latipes_hsok
ENSGMOG00000014280	safb	100	64.014	ENSOMEG00000009066	safb	100	63.658	Oryzias_melastigma
ENSGMOG00000014280	safb	63	40.369	ENSOGAG00000027769	SAFB	59	46.359	Otolemur_garnettii
ENSGMOG00000014280	safb	98	37.832	ENSOARG00000007662	-	95	37.768	Ovis_aries
ENSGMOG00000014280	safb	80	38.187	ENSOARG00000007856	-	55	45.107	Ovis_aries
ENSGMOG00000014280	safb	95	41.784	ENSPPAG00000035129	SAFB	73	57.692	Pan_paniscus
ENSGMOG00000014280	safb	65	40.323	ENSPPRG00000017197	SAFB	59	45.760	Panthera_pardus
ENSGMOG00000014280	safb	95	41.784	ENSPTRG00000010335	SAFB	73	57.692	Pan_troglodytes
ENSGMOG00000014280	safb	95	41.315	ENSPANG00000007770	SAFB	97	40.406	Papio_anubis
ENSGMOG00000014280	safb	100	59.322	ENSPKIG00000009902	safb	100	57.469	Paramormyrops_kingsleyae
ENSGMOG00000014280	safb	98	45.416	ENSPSIG00000011679	-	98	45.201	Pelodiscus_sinensis
ENSGMOG00000014280	safb	98	43.223	ENSPSIG00000009367	-	96	41.845	Pelodiscus_sinensis
ENSGMOG00000014280	safb	60	47.628	ENSPCIG00000009504	-	91	53.728	Phascolarctos_cinereus
ENSGMOG00000014280	safb	100	60.287	ENSPFOG00000007745	safb	100	59.353	Poecilia_formosa
ENSGMOG00000014280	safb	100	57.798	ENSPLAG00000001614	safb	100	56.897	Poecilia_latipinna
ENSGMOG00000014280	safb	100	60.167	ENSPMEG00000021023	safb	100	59.233	Poecilia_mexicana
ENSGMOG00000014280	safb	100	58.548	ENSPREG00000012496	safb	100	57.783	Poecilia_reticulata
ENSGMOG00000014280	safb	65	40.226	ENSPPYG00000009428	SAFB	59	45.855	Pongo_abelii
ENSGMOG00000014280	safb	63	36.895	ENSPCAG00000006475	SAFB	53	46.016	Procavia_capensis
ENSGMOG00000014280	safb	95	39.976	ENSPCOG00000014090	SAFB	64	41.053	Propithecus_coquereli
ENSGMOG00000014280	safb	95	38.031	ENSPVAG00000004913	SAFB	71	47.664	Pteropus_vampyrus
ENSGMOG00000014280	safb	99	58.205	ENSPNAG00000021838	safb	98	57.278	Pygocentrus_nattereri
ENSGMOG00000014280	safb	95	40.400	ENSRBIG00000042509	SAFB	97	40.229	Rhinopithecus_bieti
ENSGMOG00000014280	safb	95	41.432	ENSRROG00000029278	SAFB	73	57.692	Rhinopithecus_roxellana
ENSGMOG00000014280	safb	95	41.905	ENSSBOG00000026291	SAFB	64	45.870	Saimiri_boliviensis_boliviensis
ENSGMOG00000014280	safb	99	59.609	ENSSFOG00015008156	safb	100	57.355	Scleropages_formosus
ENSGMOG00000014280	safb	100	69.084	ENSSMAG00000009316	safb	100	68.014	Scophthalmus_maximus
ENSGMOG00000014280	safb	100	70.037	ENSSDUG00000009652	safb	100	69.428	Seriola_dumerili
ENSGMOG00000014280	safb	100	69.834	ENSSLDG00000001670	safb	100	69.240	Seriola_lalandi_dorsalis
ENSGMOG00000014280	safb	58	39.421	ENSSARG00000010475	SAFB	60	46.821	Sorex_araneus
ENSGMOG00000014280	safb	53	41.231	ENSSPUG00000009820	-	98	43.941	Sphenodon_punctatus
ENSGMOG00000014280	safb	52	40.461	ENSSPUG00000009747	-	94	39.119	Sphenodon_punctatus
ENSGMOG00000014280	safb	99	66.378	ENSSPAG00000015682	safb	99	65.760	Stegastes_partitus
ENSGMOG00000014280	safb	95	40.471	ENSSSCG00000013522	SAFB	51	51.064	Sus_scrofa
ENSGMOG00000014280	safb	63	41.186	ENSTGUG00000000502	-	97	42.200	Taeniopygia_guttata
ENSGMOG00000014280	safb	62	42.404	ENSTGUG00000000489	-	96	45.634	Taeniopygia_guttata
ENSGMOG00000014280	safb	100	66.038	ENSTRUG00000003567	safb	100	64.817	Takifugu_rubripes
ENSGMOG00000014280	safb	91	59.703	ENSTNIG00000015470	safb	100	57.371	Tetraodon_nigroviridis
ENSGMOG00000014280	safb	75	72.222	ENSTTRG00000013588	SAFB	63	72.222	Tursiops_truncatus
ENSGMOG00000014280	safb	72	40.778	ENSUMAG00000009734	SAFB	55	67.692	Ursus_maritimus
ENSGMOG00000014280	safb	52	49.847	ENSVPAG00000012043	SAFB	50	53.231	Vicugna_pacos
ENSGMOG00000014280	safb	65	40.484	ENSVVUG00000013720	SAFB	51	46.384	Vulpes_vulpes
ENSGMOG00000014280	safb	100	60.287	ENSXMAG00000003458	safb	100	59.304	Xiphophorus_maculatus